Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 6.7e-193 677.2 341 100.0
Glyma.14G036400 Glycine max HOM05D002733 ORTHO05D010023 1.8e-161 572.8 340 87.9
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 1.8e-121 439.9 339 71.7
Phvul.008G165900 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 1.6e-114 416.8 338 68.9
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 2.7e-101 372.9 340 62.6
VMungo0647G1446 Vigna mungo HOM05D002733 ORTHO05D010023 1.3e-95 354.0 338 61.5
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 6.5e-95 351.7 348 57.5
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 6.5e-95 351.7 359 58.2
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 6.3e-90 335.1 348 58.0
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 5.7e-83 312.0 359 54.6
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 1.1e-73 281.2 343 53.4
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 1.2e-69 267.7 360 51.9
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 3.3e-67 259.6 360 50.3
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 1.9e-46 190.7 338 41.1
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 1.0e-44 184.9 348 42.2
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 2.3e-44 183.7 357 39.8
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 1.1e-41 174.9 359 36.8
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 1.7e-34 151.0 341 36.7
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 1.7e-34 151.0 303 37.3
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 1.2e-32 144.8 332 36.4
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 1.6e-32 144.4 332 36.4
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 2.0e-32 144.1 330 36.1
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.3e-31 141.4 264 38.3
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 1.7e-31 141.0 310 36.5
MD00G1045800 Malus domestica HOM05D002733 ORTHO05D010023 1.7e-31 141.0 329 35.3
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 2.3e-31 140.6 329 36.2
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 3.0e-31 140.2 263 39.2
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 3.9e-31 139.8 346 36.4
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 5.0e-31 139.4 352 33.5
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 1.9e-30 137.5 344 35.2
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 1.2e-29 134.8 292 37.0
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 1.6e-29 134.4 332 32.8
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 6.2e-29 132.5 299 38.1
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 8.0e-29 132.1 257 37.4
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 1.4e-28 131.3 266 38.3
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 3.1e-28 130.2 332 37.0
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 3.1e-28 130.2 263 37.3
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 6.8e-28 129.0 263 35.4
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 2.0e-27 127.5 301 35.2
Eucgr.J00677 Eucalyptus grandis HOM05D002733 ORTHO05D010023 2.0e-27 127.5 314 32.2
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 3.7e-26 123.2 345 34.5
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 4.9e-26 122.9 289 34.9
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 8.3e-26 122.1 212 40.1
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 1.4e-25 121.3 191 45.0
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 1.9e-25 120.9 301 34.6
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 2.7e-24 117.1 213 41.3
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 4.6e-24 116.3 327 32.7
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 1.3e-23 114.8 191 41.9
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 8.6e-23 112.1 271 35.4
Aqoxy2G00438 Aquilegia oxysepala HOM05D002733 ORTHO05D010023 4.3e-22 109.8 320 35.6
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 4.3e-22 109.8 285 36.5
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 5.6e-22 109.4 345 31.6
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 7.3e-22 109.0 198 39.4
AUR62000212 Chenopodium quinoa HOM05D002733 ORTHO05D010023 3.6e-21 106.7 188 42.0
ECA238G3721 Erigeron canadensis HOM05D002733 ORTHO05D010023 4.7e-21 106.3 190 38.9
AUR62006558 Chenopodium quinoa HOM05D002733 ORTHO05D010023 8.1e-21 105.5 190 41.1
Manes.02G136900 Manihot esculenta HOM05D002733 ORTHO05D010023 1.1e-20 105.1 283 32.2
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 3.1e-20 103.6 198 40.9
Lsat_1_v5_gn_2_32340 Lactuca sativa HOM05D002733 ORTHO05D010023 8.9e-20 102.1 276 33.7
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 2.0e-19 100.9 341 31.4
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 7.5e-19 99.0 291 32.6
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 1.7e-18 97.8 327 31.5
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 2.2e-18 97.4 140 45.0
PGR119G1676 Punica granatum HOM05D002733 ORTHO05D010023 1.1e-17 95.1 209 38.3
Ah.06g194720 Amaranthus hybridus HOM05D002733 ORTHO05D010023 1.9e-17 94.4 188 39.4
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 1.2e-16 91.7 334 30.2
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 4.6e-16 89.7 335 30.1
HanXRQChr03g0090311 Helianthus annuus HOM05D002733 ORTHO05D010023 6.0e-16 89.4 307 30.9
Sc16g0010940 Simmondsia chinensis HOM05D002733 ORTHO05D010023 1.3e-15 88.2 105 51.4
Lsat_1_v5_gn_2_32520 Lactuca sativa HOM05D002733 ORTHO05D010023 3.0e-15 87.0 260 31.2
Sabra09G0051300 Salix brachista HOM05D002733 ORTHO05D010023 6.6e-15 85.9 85 50.6
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 8.6e-15 85.5 189 32.3
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 1.5e-14 84.7 326 29.8
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 3.3e-14 83.6 328 29.0
SEGI_26394 Sequoiadendron giganteum HOM05D001841 ORTHO05D001767 9.5e-14 82.0 232 33.2
ATR0307G041 Amborella trichopoda HOM05D002733 ORTHO05D010023 1.2e-11 75.1 149 37.6
Lsat_1_v5_gn_3_109980 Lactuca sativa HOM05D002733 ORTHO05D010023 1.5e-11 74.7 188 33.5
TAR633G0275 Trochodendron aralioides HOM05D002733 ORTHO05D010023 2.0e-11 74.3 157 34.4
SGA_v2.0_scaffold29G12225 Striga asiatica HOM05D002733 ORTHO05D010023 2.6e-11 73.9 274 32.5
Nitab4.5_0006764g0040 Nicotiana tabacum HOM05D018239 ORTHO05D010023 3.4e-11 73.6 186 31.2
MBI13_g09212_MAGBIO Magnolia biondii HOM05D002733 ORTHO05D010023 3.8e-10 70.1 200 32.0
Nn5g30193 Nelumbo nucifera HOM05D001841 ORTHO05D001767 1.1e-09 68.6 221 34.8
ECA240G3738 Erigeron canadensis HOM05D004351 ORTHO05D005196 1.4e-09 68.2 152 38.2
TAR625G0113 Trochodendron aralioides HOM05D001841 ORTHO05D001767 1.6e-08 64.7 110 43.6
THA.LOC104803791 Tarenaya hassleriana HOM05D001841 ORTHO05D001767 1.7e-07 61.2 115 44.3
AL4G19390 Arabidopsis lyrata HOM05D001841 ORTHO05D001767 3.9e-07 60.1 211 31.8
BraA03t11907Z Brassica rapa HOM05D001841 ORTHO05D001767 6.6e-07 59.3 192 32.8
Dinv41084 Davidia involucrata HOM05D002733 ORTHO05D010023 6.6e-07 59.3 135 34.1
Actinidia27944 Actinidia chinensis HOM05D000058 ORTHO05D001767 8.6e-07 58.9 205 29.8
A03p26960 Brassica napus HOM05D001841 ORTHO05D001767 8.6e-07 58.9 192 32.8
HPP92_022826 Vanilla planifolia HOM05D002733 ORTHO05D010023 8.6e-07 58.9 165 32.1
unitig_37.g12810 Utricularia gibba HOM05D001841 ORTHO05D001767 1.1e-06 58.5 195 30.3
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 1.5e-06 58.2 202 30.2
CARHR120050 Cardamine hirsuta HOM05D001841 ORTHO05D001767 1.5e-06 58.2 118 39.0
Eucgr.F00024 Eucalyptus grandis HOM05D001841 ORTHO05D001767 2.5e-06 57.4 113 37.2
ATR0097G009 Amborella trichopoda HOM05D001841 ORTHO05D001767 3.3e-06 57.0 211 30.8
BcaB06g27216 Brassica carinata HOM05D001841 ORTHO05D001767 3.3e-06 57.0 197 32.5
Peaxi162Scf00684g00566 Petunia axillaris HOM05D001841 ORTHO05D001767 3.3e-06 57.0 228 30.3
Carub.0004s0670 Capsella rubella HOM05D001841 ORTHO05D001767 5.6e-06 56.2 214 29.9
Oeu009759.1 Olea europaea HOM05D001841 ORTHO05D001767 5.6e-06 56.2 97 40.2
Sp4g07730 Schrenkiella parvula HOM05D001841 ORTHO05D001767 7.3e-06 55.8 201 33.3
Aqoxy6G01410 Aquilegia oxysepala HOM05D001841 ORTHO05D001767 9.6e-06 55.5 135 34.1


User provided reference genes

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