Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 1.5e-69 266.2 140 100.0
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 3.1e-59 231.9 140 88.6
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 2.9e-57 225.3 140 86.4
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 2.1e-55 219.2 142 83.1
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 1.5e-53 213.0 140 80.7
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 7.3e-53 210.7 140 80.7
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 1.7e-49 199.5 140 70.0
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 1.4e-43 179.9 137 71.5
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 2.6e-42 175.6 102 79.4
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 7.6e-42 174.1 134 70.1
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 7.6e-42 174.1 133 71.4
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 2.9e-41 172.2 137 72.3
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 1.4e-40 169.9 127 70.9
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 9.3e-40 167.2 137 57.7
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 9.3e-40 167.2 137 70.8
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 1.2e-39 166.8 138 69.6
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 2.7e-39 165.6 132 68.9
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 6.0e-39 164.5 127 70.1
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 7.8e-39 164.1 136 69.1
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 1.3e-38 163.3 132 57.6
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 5.1e-38 161.4 105 70.5
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 1.9e-37 159.5 135 67.4
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 3.3e-37 158.7 135 59.3
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 1.3e-36 156.8 132 59.1
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 1.6e-36 156.4 114 75.4
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.6e-36 156.4 113 61.9
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 2.1e-36 156.0 137 63.5
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 2.1e-36 156.0 140 63.6
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 8.1e-36 154.1 113 61.9
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 8.1e-36 154.1 113 61.9
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 8.1e-36 154.1 132 58.3
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 1.2e-34 150.2 137 57.7
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 3.4e-34 148.7 147 53.7
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 3.4e-34 148.7 125 61.6
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 4.5e-34 148.3 133 54.1
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 7.6e-34 147.5 138 61.6
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.3e-33 146.7 93 76.3
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 4.9e-33 144.8 133 51.9
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 4.9e-33 144.8 116 66.4
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 4.9e-33 144.8 139 64.7
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 1.1e-32 143.7 106 62.3
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.4e-32 143.3 127 63.0
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 1.4e-32 143.3 117 67.5
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 1.9e-32 142.9 132 61.4
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 5.4e-32 141.4 136 52.9
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 1.2e-31 140.2 105 59.0
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 2.1e-31 139.4 110 59.1
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 1.3e-30 136.7 127 52.8
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 6.7e-30 134.4 135 48.1
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 6.7e-30 134.4 116 56.0
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.5e-29 133.3 120 55.0
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.5e-29 132.5 115 64.3
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 2.1e-28 129.4 128 50.8
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 2.1e-28 129.4 165 43.0
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 3.6e-28 128.6 113 66.4
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 6.2e-28 127.9 96 75.0
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 3.1e-27 125.6 112 65.2
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 1.5e-26 123.2 99 64.6
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 1.5e-26 123.2 137 48.2
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 2.0e-26 122.9 117 51.3
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 5.8e-26 121.3 95 69.5
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 3.8e-25 118.6 112 62.5
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 8.4e-25 117.5 112 61.6
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 9.3e-24 114.0 84 60.7
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 1.2e-23 113.6 112 56.2
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 1.6e-23 113.2 112 57.1
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 2.1e-23 112.8 95 62.1
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 3.5e-23 112.1 124 53.2
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 4.6e-23 111.7 112 54.5
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 5.1e-22 108.2 112 55.4
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 5.1e-22 108.2 127 51.2
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 6.7e-22 107.8 100 63.0
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 8.7e-22 107.5 112 53.6
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 8.7e-22 107.5 112 55.4
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 1.5e-21 106.7 112 53.6
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 3.3e-21 105.5 113 55.8
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 7.4e-21 104.4 102 61.8
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 9.6e-21 104.0 81 74.1
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 1.3e-20 103.6 127 51.2
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 2.8e-20 102.4 78 61.5
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 1.1e-19 100.5 80 58.8
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 1.8e-19 99.8 99 59.6
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 1.3e-17 93.6 103 42.7
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 6.5e-17 91.3 80 56.2
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 7.1e-16 87.8 90 60.0
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 4.6e-15 85.1 90 57.8
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 1.3e-14 83.6 94 40.4
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 2.8e-12 75.9 93 53.8
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 6.3e-12 74.7 127 37.8
vmacro13551 Vaccinium macrocarpon HOM05D007737 ORTHO05D009754 5.3e-11 71.6 177 31.1
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 7.6e-10 67.8 42 64.3
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 4.6e-07 58.5 64 42.2


User provided reference genes

Program Settings