Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G272500 Glycine max HOM05D000881 ORTHO05D000666 2.2e-142 509.2 312 100.0
Glyma.14G045200 Glycine max HOM05D000881 ORTHO05D000666 3.4e-82 309.3 369 65.3
Phvul.009G196600 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 1.0e-38 164.9 312 52.9
VMungo1309G2673 Vigna mungo HOM05D000881 ORTHO05D000666 4.2e-32 142.9 314 42.7
Lalb_Chr10g0105781 Lupinus albus HOM05D000881 ORTHO05D000666 3.9e-14 83.2 76 51.3
Psat2g023400 Pisum sativum HOM05D000881 ORTHO05D000666 7.4e-13 79.0 78 56.4
Medtr5g087450 Medicago truncatula HOM05D000881 ORTHO05D000666 1.3e-12 78.2 81 50.6
LjContig00564g0024719 Lotus japonicus HOM05D000881 ORTHO05D000666 1.1e-11 75.1 318 38.1
EL10Ac7g16247 Beta vulgaris HOM05D000881 ORTHO05D000666 5.3e-11 72.8 82 51.2
Ah.08g222550 Amaranthus hybridus HOM05D000881 ORTHO05D000666 6.9e-11 72.4 70 51.4
Hund18820 Selenicereus undatus HOM05D000881 ORTHO05D000666 2.0e-10 70.9 84 44.0
Sabra04G0129700 Salix brachista HOM05D000881 ORTHO05D000666 3.4e-10 70.1 58 56.9
Hund20971 Selenicereus undatus HOM05D000881 ORTHO05D000666 3.4e-10 70.1 74 47.3
AUR62001592 Chenopodium quinoa HOM05D000881 ORTHO05D000666 4.5e-10 69.7 78 47.4
Psat2g023440 Pisum sativum HOM05D000881 ORTHO05D000666 7.6e-10 68.9 78 48.7
Ah.08g222530 Amaranthus hybridus HOM05D000881 ORTHO05D000666 2.9e-09 67.0 63 50.8
AUR62020188 Chenopodium quinoa HOM05D000881 ORTHO05D000666 5.0e-09 66.2 73 45.2
Haze_23630 Corylus avellana HOM05D000881 ORTHO05D000666 6.5e-09 65.9 82 46.3
LjContig00564g0002053 Lotus japonicus HOM05D000881 ORTHO05D000666 8.5e-09 65.5 76 40.8
Manes.04G055300 Manihot esculenta HOM05D000881 ORTHO05D000666 8.5e-09 65.5 82 46.3
Sc21g0006620 Simmondsia chinensis HOM05D000881 ORTHO05D000666 1.1e-08 65.1 80 45.0
Potri.009G153200 Populus trichocarpa HOM05D000881 ORTHO05D000666 1.4e-08 64.7 70 45.7
PGR119G0695 Punica granatum HOM05D000881 ORTHO05D000666 1.4e-08 64.7 76 42.1
Sc21g0006600 Simmondsia chinensis HOM05D000881 ORTHO05D000666 1.4e-08 64.7 80 45.0
MD11G1178700 Malus domestica HOM05D000881 ORTHO05D000666 1.9e-08 64.3 84 44.0
Atru.chr3.3015 Acer truncatum HOM05D000881 ORTHO05D000666 2.5e-08 63.9 70 47.1
EL10Ac7g16246 Beta vulgaris HOM05D000881 ORTHO05D000666 2.5e-08 63.9 61 47.5
Glyma.14G045300 Glycine max HOM05D000881 ORTHO05D000666 2.5e-08 63.9 77 42.9
Lalb_Chr04g0249781 Lupinus albus HOM05D000881 ORTHO05D000666 2.5e-08 63.9 320 31.6
Dinv05245 Davidia involucrata HOM05D000881 ORTHO05D000666 3.2e-08 63.5 80 43.8
Migut.D00720 Erythranthe guttata HOM05D000881 ORTHO05D000666 3.2e-08 63.5 61 49.2
AUR62001593 Chenopodium quinoa HOM05D000881 ORTHO05D000666 5.5e-08 62.8 70 42.9
Potri.009G153100 Populus trichocarpa HOM05D000881 ORTHO05D000666 5.5e-08 62.8 75 45.3
Ca_06136_v3 Cicer arietinum L. HOM05D000881 ORTHO05D000666 7.2e-08 62.4 78 48.7
AUR62020187 Chenopodium quinoa HOM05D000881 ORTHO05D000666 9.3e-08 62.0 70 42.9
Lalb_Chr10g0105791 Lupinus albus HOM05D000881 ORTHO05D000666 9.3e-08 62.0 75 42.7
Glyma.10G106800 Glycine max HOM05D000881 ORTHO05D000666 1.2e-07 61.6 72 38.9
Psat2g023360 Pisum sativum HOM05D000881 ORTHO05D000666 1.2e-07 61.6 74 43.2
Sabra09G0120900 Salix brachista HOM05D000881 ORTHO05D000666 1.2e-07 61.6 70 42.9
Eucgr.J00611 Eucalyptus grandis HOM05D000881 ORTHO05D000666 1.6e-07 61.2 77 42.9
VMungo0647G1281 Vigna mungo HOM05D000881 ORTHO05D000666 1.6e-07 61.2 80 41.2
MSTRG.21312 Avicennia marina HOM05D000881 ORTHO05D000666 2.1e-07 60.8 77 44.2
Phvul.007G250400 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 2.7e-07 60.5 67 44.8
SGA_v2.0_scaffold29G12123 Striga asiatica HOM05D000881 ORTHO05D000666 3.6e-07 60.1 72 43.1
Potri.004G191101 Populus trichocarpa HOM05D000881 ORTHO05D000666 4.6e-07 59.7 304 26.0
Peaxi162Scf01021g00028 Petunia axillaris HOM05D000881 ORTHO05D000666 7.9e-07 58.9 82 40.2
SalBow6G4118 Salvia bowleyana HOM05D000881 ORTHO05D000666 7.9e-07 58.9 76 39.5
Dinv32138 Davidia involucrata HOM05D000881 ORTHO05D000666 1.0e-06 58.5 79 36.7
Solyc09g007140.4 Solanum lycopersicum HOM05D000881 ORTHO05D000666 1.0e-06 58.5 76 42.1
Sopen09g002010 Solanum pennellii HOM05D000881 ORTHO05D000666 1.0e-06 58.5 76 42.1
TPR.G11722 Trifolium pratense HOM05D000881 ORTHO05D000666 1.0e-06 58.5 321 26.5
CiPaw.13G128700 Carya illinoinensis HOM05D000881 ORTHO05D000666 1.3e-06 58.2 73 42.5
Prupe.6G151500 Prunus persica HOM05D000881 ORTHO05D000666 1.3e-06 58.2 61 45.9
AT2G27140 Arabidopsis thaliana HOM05D000881 ORTHO05D000666 1.8e-06 57.8 87 39.1
Peaxi162Scf00345g00410 Petunia axillaris HOM05D000881 ORTHO05D000666 2.3e-06 57.4 72 40.3
Potri.004G191200 Populus trichocarpa HOM05D000881 ORTHO05D000666 2.3e-06 57.4 304 26.3
arahy.Tifrunner.gnm1.ann1.F40JVX Arachis hypogaea HOM05D043812 ORTHO05D000666 3.0e-06 57.0 76 44.7
MELO3C015587.2 Cucumis melo HOM05D000881 ORTHO05D000666 3.0e-06 57.0 87 41.4
Glyma.14G045400 Glycine max HOM05D000881 ORTHO05D000666 3.0e-06 57.0 80 40.0
Psat2g023200 Pisum sativum HOM05D000881 ORTHO05D000666 3.0e-06 57.0 78 39.7
Sabra09G0120800 Salix brachista HOM05D000881 ORTHO05D000666 3.0e-06 57.0 75 42.7
VMungo0720G2887 Vigna mungo HOM05D000881 ORTHO05D000666 3.0e-06 57.0 67 43.3
Actinidia06353 Actinidia chinensis HOM05D000881 ORTHO05D000666 5.1e-06 56.2 83 36.1
Nitab4.5_0000615g0070 Nicotiana tabacum HOM05D000881 ORTHO05D000666 5.1e-06 56.2 81 39.5
Peaxi162Scf00217g00619 Petunia axillaris HOM05D000881 ORTHO05D000666 5.1e-06 56.2 82 39.0
MELO3C015589.2 Cucumis melo HOM05D000881 ORTHO05D000666 6.7e-06 55.8 82 45.1
Phvul.008G209800 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 6.7e-06 55.8 80 38.8
Hma1.2p1_0218F.1_g092410 Hydrangea macrophylla HOM05D000881 ORTHO05D000666 8.7e-06 55.5 78 39.7


User provided reference genes

Program Settings