Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 8.5e-276 953.0 459 100.0
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 3.6e-258 894.4 464 92.7
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 2.2e-239 832.0 465 87.3
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 1.5e-216 756.1 463 78.8
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 2.1e-210 735.7 468 75.4
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 5.3e-209 731.1 460 76.7
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 3.4e-208 728.4 467 75.2
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 3.5e-205 718.4 450 74.2
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 6.0e-205 717.6 459 73.2
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.2e-200 703.4 459 73.4
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 2.9e-191 672.2 460 71.1
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 3.6e-189 665.2 460 70.2
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 4.3e-187 658.3 452 69.0
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 9.1e-185 650.6 451 69.0
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 5.5e-182 641.3 451 68.1
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 1.0e-180 637.1 451 69.0
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 3.3e-179 632.1 355 87.3
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 4.4e-179 631.7 463 65.7
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 1.7e-178 629.8 439 68.1
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.2e-178 629.4 431 68.7
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 1.4e-177 626.7 464 64.9
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.4e-177 626.7 431 68.4
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.3e-177 624.8 460 65.4
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 6.9e-177 624.4 456 65.4
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 7.7e-176 620.9 430 68.6
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.0e-175 620.5 454 65.4
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 1.3e-175 620.2 438 65.8
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 1.7e-175 619.8 425 67.1
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.7e-175 619.8 426 68.1
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 1.7e-175 619.8 446 66.8
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 2.2e-175 619.4 432 68.3
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 2.9e-175 619.0 452 65.7
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 4.2e-174 615.1 423 69.0
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 4.2e-174 615.1 453 65.8
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 9.4e-174 614.0 423 69.5
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 1.6e-173 613.2 449 65.0
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 1.6e-173 613.2 444 66.4
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.6e-173 613.2 437 66.6
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 1.4e-172 610.1 402 70.4
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 5.2e-172 608.2 435 66.2
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 8.8e-172 607.4 433 67.2
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 2.6e-171 605.9 435 66.7
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.6e-171 605.9 449 63.0
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 7.4e-171 604.4 489 60.9
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 9.1e-169 597.4 435 66.2
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 3.5e-168 595.5 419 65.4
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 5.0e-167 591.7 432 63.2
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.1e-166 590.5 418 65.3
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.5e-166 590.1 422 64.5
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 2.5e-166 589.3 429 65.3
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 3.2e-166 589.0 420 66.2
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 4.2e-166 588.6 394 69.0
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 7.2e-166 587.8 432 62.7
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 2.7e-165 585.9 425 64.0
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 8.0e-165 584.3 410 66.1
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 1.8e-164 583.2 458 59.4
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 3.0e-164 582.4 411 66.4
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 5.2e-164 581.6 453 61.1
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 1.5e-163 580.1 424 64.6
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 3.3e-163 578.9 449 59.7
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 4.8e-162 575.1 434 62.0
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 9.1e-161 570.9 424 63.0
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 9.1e-161 570.9 424 63.0
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.2e-159 566.2 460 60.2
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 2.9e-159 565.8 424 62.7
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.9e-158 563.1 463 60.9
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.5e-158 562.8 437 61.3
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 5.5e-158 561.6 425 62.1
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 1.6e-157 560.1 425 62.4
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 3.1e-153 545.8 430 61.6
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.5e-151 538.1 401 63.8
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.1e-150 537.3 426 61.5
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 3.2e-150 535.8 433 60.3
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.2e-147 527.3 464 58.2
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 2.0e-147 526.6 460 58.5
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 5.9e-144 515.0 465 57.0
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 3.6e-141 505.8 397 61.0
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 1.0e-140 504.2 424 55.9
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 4.4e-139 498.8 424 58.0
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 6.4e-138 495.0 406 58.9
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 8.3e-138 494.6 326 68.1
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 1.0e-135 487.6 413 55.9
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 1.7e-135 486.9 397 56.2
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 5.6e-134 481.9 449 57.0
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 4.9e-130 468.8 447 50.8
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 1.4e-129 467.2 357 65.5
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.0e-128 463.4 414 57.2
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.6e-128 462.2 397 58.4
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 8.6e-127 458.0 339 65.2
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.4e-123 446.0 386 58.5
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 7.8e-120 434.9 433 48.7
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 2.3e-119 433.3 337 61.1
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.2e-115 421.0 337 60.8
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 3.6e-101 372.9 226 74.3
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 3.0e-95 353.2 224 69.6
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 3.0e-87 326.6 254 66.9
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 7.9e-80 302.0 246 60.2
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 4.8e-69 266.2 198 64.1
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 9.7e-62 241.9 394 37.1
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.1e-56 222.6 130 78.5
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.1e-56 222.6 130 78.5
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 4.0e-47 193.4 161 59.6
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 6.3e-45 186.0 385 32.5
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.4e-36 158.3 172 47.1
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 1.4e-31 141.7 135 53.3
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.3e-26 125.2 70 85.7
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-25 122.1 170 43.5
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-25 122.1 170 43.5
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 1.8e-23 114.8 99 55.6
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 6.4e-21 106.3 63 71.4
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 1.9e-20 104.8 75 64.0
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 1.2e-14 85.5 206 29.6
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 7.5e-14 82.8 203 29.6
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 8.3e-13 79.3 199 30.2
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 4.1e-12 77.0 240 27.5
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 6.6e-10 69.7 75 44.0


User provided reference genes

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