Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G262700 Glycine max HOM05D004894 ORTHO05D005689 6.9e-93 344.0 176 100.0
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 4.5e-84 314.7 176 93.8
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 4.5e-84 314.7 176 93.8
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 4.5e-84 314.7 176 93.8
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 4.5e-84 314.7 176 93.8
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 5.0e-83 311.2 176 92.6
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 4.9e-30 135.2 182 46.2
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 8.7e-27 124.4 180 42.2
Glyma.14G020600 Glycine max HOM05D004894 ORTHO05D005689 9.6e-26 120.9 178 46.1
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 2.1e-25 119.8 168 41.7
Glyma.14G020900 Glycine max HOM05D004894 ORTHO05D005689 2.8e-25 119.4 179 45.3
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 2.8e-25 119.4 179 42.5
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.1e-24 117.5 171 41.5
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 1.4e-24 117.1 164 43.3
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.8e-24 116.7 187 39.0
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 3.1e-24 115.9 178 40.4
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 6.9e-24 114.8 172 40.7
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 6.9e-24 114.8 172 40.7
Glyma.10G223100 Glycine max HOM05D004894 ORTHO05D005689 2.0e-23 113.2 177 42.9
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 9.9e-23 110.9 176 40.3
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 1.3e-22 110.5 173 35.8
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 1.7e-22 110.2 176 38.6
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 1.7e-22 110.2 165 41.8
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 1.4e-21 107.1 150 38.0
Medtr6g038010 Medicago truncatula HOM05D004894 ORTHO05D005689 1.4e-21 107.1 155 36.8
VMungo0720G2185 Vigna mungo HOM05D004894 ORTHO05D005689 1.4e-21 107.1 177 39.0
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 4.2e-21 105.5 166 39.2
Lalb_Chr02g0141491 Lupinus albus HOM05D004894 ORTHO05D005689 7.1e-21 104.8 173 38.2
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 2.1e-20 103.2 172 36.0
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 3.5e-20 102.4 166 34.9
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 6.0e-20 101.7 178 38.2
VMungo0647G0768 Vigna mungo HOM05D004894 ORTHO05D005689 7.8e-20 101.3 180 37.2
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 1.0e-19 100.9 176 37.5
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 1.3e-19 100.5 172 36.0
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 1.7e-19 100.1 176 36.9
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 2.3e-19 99.8 174 38.5
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 2.3e-19 99.8 171 34.5
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 3.0e-19 99.4 168 39.9
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 3.9e-19 99.0 183 36.1
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 6.6e-19 98.2 173 37.6
Medtr1g098200 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-18 97.4 181 35.9
Medtr1g098400 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-18 97.4 181 35.9
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 1.5e-18 97.1 164 35.4
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 1.5e-18 97.1 164 35.4
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 2.1e-17 93.2 131 38.9
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 6.2e-17 91.7 161 36.0
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.8e-16 90.1 168 36.3
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 5.3e-16 88.6 180 33.3
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 9.0e-16 87.8 171 33.9
Medtr1g098430 Medicago truncatula HOM05D004894 ORTHO05D005689 1.2e-15 87.4 181 35.4
TPR.G17037 Trifolium pratense HOM05D004894 ORTHO05D005689 2.6e-15 86.3 118 36.4
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 7.6e-15 84.7 171 34.5
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 9.9e-15 84.3 160 35.0
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 1.1e-13 80.9 173 32.4
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-13 80.5 166 34.3
Lalb_Chr03g0035421 Lupinus albus HOM05D004894 ORTHO05D005689 4.2e-13 79.0 177 30.5
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 5.4e-13 78.6 175 34.9
Medtr3g060470 Medicago truncatula HOM05D004894 ORTHO05D005689 5.4e-13 78.6 158 33.5
Medtr3g060520 Medicago truncatula HOM05D004894 ORTHO05D005689 5.4e-13 78.6 158 33.5
Medtr3g060570 Medicago truncatula HOM05D004894 ORTHO05D005689 5.4e-13 78.6 158 33.5
Lalb_Chr03g0035431 Lupinus albus HOM05D004894 ORTHO05D005689 7.1e-13 78.2 177 29.4
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 7.1e-13 78.2 168 32.7
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-12 77.4 144 32.6
Haze_17792 Corylus avellana HOM05D004894 ORTHO05D005689 4.6e-12 75.5 138 34.8
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 1.3e-11 73.9 171 35.1
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 1.8e-11 73.6 162 35.2
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 1.8e-11 73.6 178 29.2
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 6.7e-11 71.6 153 28.1
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 6.7e-11 71.6 173 31.8
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 8.7e-11 71.2 173 30.6
Medtr6g039260 Medicago truncatula HOM05D004894 ORTHO05D005689 1.9e-10 70.1 178 34.8
Psat7g222800 Pisum sativum HOM05D004894 ORTHO05D005689 2.5e-10 69.7 105 38.1
Psat6g191480 Pisum sativum HOM05D004894 ORTHO05D005689 1.3e-09 67.4 100 39.0
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 1.3e-09 67.4 174 26.4
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 1.6e-09 67.0 155 30.3
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 2.1e-09 66.6 175 28.6
Psat6g191560 Pisum sativum HOM05D004894 ORTHO05D005689 4.8e-09 65.5 100 37.0
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 8.1e-09 64.7 163 32.5
Medtr6g037880 Medicago truncatula HOM05D004894 ORTHO05D005689 2.4e-08 63.2 172 28.5
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 5.3e-08 62.0 176 26.7
TPR.G11233 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-07 60.8 170 27.6
Medtr6g034800 Medicago truncatula HOM05D004894 ORTHO05D005689 2.6e-07 59.7 178 32.6
Medtr6g037700 Medicago truncatula HOM05D004894 ORTHO05D005689 2.6e-07 59.7 174 29.3
Medtr6g034580 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-06 57.4 178 29.2
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 4.9e-06 55.5 105 33.3
Lalb_Chr19g0125751 Lupinus albus HOM05D067330 ORTHO05D005689 4.9e-06 55.5 179 27.9


User provided reference genes

Program Settings