Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 1.9e-90 335.9 175 100.0
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 1.9e-90 335.9 175 100.0
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 1.9e-90 335.9 175 100.0
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 1.9e-90 335.9 175 100.0
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 2.1e-89 332.4 175 98.9
Glyma.02G262700 Glycine max HOM05D004894 ORTHO05D005689 2.2e-83 312.4 176 93.8
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 1.4e-29 133.7 182 46.2
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 3.3e-26 122.5 168 42.9
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 9.5e-26 120.9 180 42.2
Glyma.14G020600 Glycine max HOM05D004894 ORTHO05D005689 1.2e-25 120.6 178 46.6
Glyma.14G020900 Glycine max HOM05D004894 ORTHO05D005689 3.6e-25 119.0 179 45.8
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 4.7e-25 118.6 167 43.1
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 6.2e-25 118.2 187 39.6
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.1e-24 117.5 178 41.0
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 1.8e-24 116.7 172 36.0
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 3.1e-24 115.9 179 42.5
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 3.1e-24 115.9 171 41.5
Glyma.10G223100 Glycine max HOM05D004894 ORTHO05D005689 2.6e-23 112.8 177 42.9
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 7.5e-23 111.3 164 40.9
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 7.5e-23 111.3 172 39.0
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 7.5e-23 111.3 172 39.0
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 7.5e-23 111.3 165 39.4
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 3.7e-22 109.0 174 41.4
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 8.3e-22 107.8 175 38.3
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 8.3e-22 107.8 177 39.0
VMungo0720G2185 Vigna mungo HOM05D004894 ORTHO05D005689 8.3e-22 107.8 177 39.0
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 2.4e-21 106.3 176 40.3
VMungo0647G0768 Vigna mungo HOM05D004894 ORTHO05D005689 7.1e-21 104.8 180 38.3
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-20 103.2 166 36.1
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 2.7e-20 102.8 167 37.1
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 3.5e-20 102.4 172 37.8
Lalb_Chr02g0141491 Lupinus albus HOM05D004894 ORTHO05D005689 6.0e-20 101.7 173 38.2
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 6.0e-20 101.7 182 36.3
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 6.0e-20 101.7 172 36.6
Medtr6g038010 Medicago truncatula HOM05D004894 ORTHO05D005689 6.0e-20 101.7 155 36.8
Medtr1g098200 Medicago truncatula HOM05D004894 ORTHO05D005689 7.8e-20 101.3 180 36.1
Medtr1g098400 Medicago truncatula HOM05D004894 ORTHO05D005689 7.8e-20 101.3 180 36.1
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 7.8e-20 101.3 173 38.7
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 5.1e-19 98.6 176 36.9
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 8.6e-19 97.8 171 35.7
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 1.1e-18 97.4 174 37.9
Medtr1g098430 Medicago truncatula HOM05D004894 ORTHO05D005689 2.5e-18 96.3 180 36.7
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 9.5e-18 94.4 131 38.9
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 9.5e-18 94.4 169 35.5
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 9.5e-18 94.4 168 39.9
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 3.6e-17 92.4 145 35.9
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 4.7e-17 92.0 164 34.8
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 4.7e-17 92.0 164 34.8
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 1.1e-16 90.9 170 33.5
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 1.4e-16 90.5 180 33.9
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 4.0e-16 89.0 168 36.9
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 4.0e-16 89.0 161 35.4
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 3.4e-15 85.9 159 35.2
TPR.G17037 Trifolium pratense HOM05D004894 ORTHO05D005689 7.6e-15 84.7 145 32.4
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 9.9e-15 84.3 165 35.2
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 1.3e-14 84.0 171 35.1
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 2.9e-14 82.8 173 33.5
Haze_17792 Corylus avellana HOM05D004894 ORTHO05D005689 9.2e-13 77.8 139 33.1
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 9.2e-13 77.8 178 30.9
Haze_17777 Corylus avellana HOM05D004894 ORTHO05D005689 1.2e-12 77.4 139 33.1
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 1.2e-12 77.4 173 34.1
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 1.2e-12 77.4 164 34.1
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 2.1e-12 76.6 144 30.6
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 6.0e-12 75.1 145 31.7
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 6.0e-12 75.1 170 34.1
Medtr3g060470 Medicago truncatula HOM05D004894 ORTHO05D005689 6.0e-12 75.1 157 32.5
Medtr3g060520 Medicago truncatula HOM05D004894 ORTHO05D005689 6.0e-12 75.1 157 32.5
Medtr3g060570 Medicago truncatula HOM05D004894 ORTHO05D005689 6.0e-12 75.1 157 32.5
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 1.0e-11 74.3 161 34.2
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 1.0e-11 74.3 167 32.9
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 1.0e-11 74.3 144 32.6
Lalb_Chr03g0035431 Lupinus albus HOM05D004894 ORTHO05D005689 3.0e-11 72.8 177 28.8
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 6.6e-11 71.6 173 27.2
Lalb_Chr03g0035421 Lupinus albus HOM05D004894 ORTHO05D005689 1.5e-10 70.5 177 29.4
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 1.5e-10 70.5 174 30.5
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 1.9e-10 70.1 143 30.1
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 1.9e-10 70.1 143 30.1
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 1.9e-10 70.1 169 30.8
Psat6g191480 Pisum sativum HOM05D004894 ORTHO05D005689 4.3e-10 68.9 100 39.0
Psat7g222800 Pisum sativum HOM05D004894 ORTHO05D005689 4.3e-10 68.9 105 38.1
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 9.6e-10 67.8 170 28.8
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 1.6e-09 67.0 163 33.7
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 2.8e-09 66.2 175 28.6
Psat6g191560 Pisum sativum HOM05D004894 ORTHO05D005689 3.6e-09 65.9 100 36.0
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 6.2e-09 65.1 153 26.8
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 1.2e-07 60.8 155 29.0
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 2.0e-07 60.1 176 26.7
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 2.2e-06 56.6 105 33.3
Lalb_Chr14g0362601 Lupinus albus HOM05D004894 ORTHO05D005689 6.4e-06 55.1 105 37.1


User provided reference genes

Program Settings