Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G225600 Glycine max HOM05D010371 ORTHO05D003507 3.2e-60 235.0 123 100.0
Phvul.008G262500 Phaseolus vulgaris HOM05D010371 ORTHO05D003507 4.0e-55 218.0 123 91.9
Glyma.14G192400 Glycine max HOM05D010371 ORTHO05D003507 2.6e-54 215.3 123 91.1
VMungo0647G2148 Vigna mungo HOM05D010371 ORTHO05D003507 1.3e-53 213.0 123 90.2
Ca_05588_v3 Cicer arietinum L. HOM05D010371 ORTHO05D003507 5.1e-42 174.5 123 74.8
TPR.G24023 Trifolium pratense HOM05D010371 ORTHO05D003507 8.7e-42 173.7 122 77.0
Psat2g059280 Pisum sativum HOM05D010371 ORTHO05D003507 2.4e-39 165.6 114 77.2
LjContig00155g0017503 Lotus japonicus HOM05D010371 ORTHO05D003507 5.3e-39 164.5 123 71.5
Medtr5g069980 Medicago truncatula HOM05D010371 ORTHO05D003507 4.5e-38 161.4 114 76.3
arahy.Tifrunner.gnm1.ann1.N7G3Q4 Arachis hypogaea HOM05D010371 ORTHO05D003507 3.5e-35 151.8 107 74.8
arahy.Tifrunner.gnm1.ann1.0452KN Arachis hypogaea HOM05D010371 ORTHO05D003507 4.6e-35 151.4 107 74.8
Lalb_Chr10g0103281 Lupinus albus HOM05D010371 ORTHO05D003507 1.0e-34 150.2 129 65.1
Lalb_Chr04g0252311 Lupinus albus HOM05D010371 ORTHO05D003507 6.5e-29 131.0 125 61.6
Glyma.18G065800 Glycine max HOM05D010371 ORTHO05D003507 1.8e-26 122.9 117 57.3
Phvul.006G065200 Phaseolus vulgaris HOM05D010371 ORTHO05D003507 1.4e-23 113.2 117 53.8
Lj6g0011323 Lotus japonicus HOM05D010371 ORTHO05D003507 1.8e-23 112.8 122 53.3
Glyma.11G176100 Glycine max HOM05D010371 ORTHO05D003507 6.9e-23 110.9 117 53.0
VMungo0540G0421 Vigna mungo HOM05D010371 ORTHO05D003507 2.6e-22 109.0 106 57.5
TPR.G13269 Trifolium pratense HOM05D010371 ORTHO05D003507 4.2e-20 101.7 120 49.2
Medtr3g462980 Medicago truncatula HOM05D010371 ORTHO05D003507 7.9e-19 97.4 121 49.6
Ca_14912_v3 Cicer arietinum L. HOM05D010371 ORTHO05D003507 1.9e-17 92.8 109 52.3
Medtr3g462960 Medicago truncatula HOM05D010371 ORTHO05D003507 2.8e-16 89.0 108 50.0
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 9.4e-12 73.9 125 39.2
CiPaw.14G060900 Carya illinoinensis HOM05D004233 ORTHO05D003507 2.7e-11 72.4 97 48.5
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 2.7e-11 72.4 113 42.5
Haze_24266 Corylus avellana HOM05D004233 ORTHO05D003507 1.4e-10 70.1 93 50.5
Glyma.07G146500 Glycine max HOM05D004233 ORTHO05D003507 1.4e-10 70.1 114 38.6
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 3.0e-10 68.9 106 41.5
VMungo1383G3137 Vigna mungo HOM05D004233 ORTHO05D003507 3.0e-10 68.9 115 38.3
Phvul.008G106800 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 3.9e-10 68.6 115 37.4
Glyma.03G078400 Glycine max HOM05D004233 ORTHO05D003507 8.8e-10 67.4 109 39.4
Nn2g13635 Nelumbo nucifera HOM05D004233 ORTHO05D003507 8.8e-10 67.4 108 39.8
Cc01_g13980 Coffea canephora HOM05D004233 ORTHO05D003507 1.5e-09 66.6 108 38.0
CiPaw.13G080500 Carya illinoinensis HOM05D004233 ORTHO05D003507 2.0e-09 66.2 106 43.4
QL01p037420 Quercus lobata HOM05D004233 ORTHO05D003507 2.0e-09 66.2 93 48.4
VMungo0331G0885 Vigna mungo HOM05D004233 ORTHO05D003507 4.4e-09 65.1 114 38.6
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 5.7e-09 64.7 111 39.6
Peaxi162Scf00056g00201 Petunia axillaris HOM05D004233 ORTHO05D003507 5.7e-09 64.7 98 38.8
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 5.7e-09 64.7 122 35.2
Glyma.01G113100 Glycine max HOM05D004233 ORTHO05D003507 9.7e-09 63.9 82 42.7
Phvul.010G005000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 1.3e-08 63.5 82 41.5
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 1.3e-08 63.5 119 36.1
Hma1.2p1_0227F.1_g096330 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 1.7e-08 63.2 108 36.1
DCAR_007388 Daucus carota HOM05D004233 ORTHO05D003507 2.2e-08 62.8 113 38.1
Gohir.D01G215600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.2e-08 62.8 73 49.3
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.2e-08 62.8 120 38.3
Gorai.002G261800 Gossypium raimondii HOM05D004233 ORTHO05D003507 2.2e-08 62.8 73 49.3
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 2.2e-08 62.8 120 38.3
Actinidia25149 Actinidia chinensis HOM05D004233 ORTHO05D003507 2.8e-08 62.4 109 37.6
Potri.001G249500 Populus trichocarpa HOM05D004233 ORTHO05D003507 2.8e-08 62.4 104 45.2
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 2.8e-08 62.4 115 38.3
Rhsim13G0071800 Rhododendron simsii HOM05D004233 ORTHO05D003507 2.8e-08 62.4 111 37.8
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 3.7e-08 62.0 120 38.3
Sabra06G0075200 Salix brachista HOM05D004233 ORTHO05D003507 3.7e-08 62.0 118 38.1
Glyma.18G197700 Glycine max HOM05D004233 ORTHO05D003507 4.8e-08 61.6 114 36.8
Gohir.A01G225900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.8e-08 61.6 73 47.9
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.8e-08 61.6 119 39.5
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 4.8e-08 61.6 80 45.0
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 6.3e-08 61.2 118 36.4
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 6.3e-08 61.2 115 42.6
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 8.2e-08 60.8 109 38.5
Lsat_1_v5_gn_9_20140 Lactuca sativa HOM05D004233 ORTHO05D003507 1.1e-07 60.5 97 44.3
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 1.4e-07 60.1 114 36.0
Aqoxy4G02651 Aquilegia oxysepala HOM05D004233 ORTHO05D003507 1.4e-07 60.1 83 48.2
MSTRG.10228 Avicennia marina HOM05D004233 ORTHO05D003507 1.8e-07 59.7 121 33.9
Cpa.g.sc163.4 Carica papaya HOM05D004233 ORTHO05D003507 1.8e-07 59.7 77 44.2
Gorai.001G115000 Gossypium raimondii HOM05D004233 ORTHO05D003507 2.4e-07 59.3 78 51.3
Gohir.A05G089700 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.1e-07 58.9 114 42.1
MELO3C009185.2 Cucumis melo HOM05D004233 ORTHO05D003507 4.1e-07 58.5 113 33.6
Gohir.D05G090600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.1e-07 58.5 114 42.1
Gorai.009G093100 Gossypium raimondii HOM05D004233 ORTHO05D003507 4.1e-07 58.5 114 42.1
BraA09t41987Z Brassica rapa HOM05D005325 ORTHO05D003507 5.3e-07 58.2 95 38.9
Gohir.D07G106900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 5.3e-07 58.2 109 43.1
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 5.3e-07 58.2 108 39.8
ClCG10G021920 Citrullus lanatus HOM05D004233 ORTHO05D003507 7.0e-07 57.8 113 33.6
Nn1g02891 Nelumbo nucifera HOM05D004233 ORTHO05D003507 7.0e-07 57.8 108 36.1
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 7.0e-07 57.8 112 40.2
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 9.1e-07 57.4 118 36.4
C08p50660 Brassica napus HOM05D005325 ORTHO05D003507 1.2e-06 57.0 96 37.5
BolC8t52594H Brassica oleracea HOM05D005325 ORTHO05D003507 1.2e-06 57.0 96 37.5
Eucgr.K02995 Eucalyptus grandis HOM05D004233 ORTHO05D003507 1.2e-06 57.0 118 33.1
Lj6g0009965 Lotus japonicus HOM05D004233 ORTHO05D003507 1.2e-06 57.0 112 34.8
Sed0004609 Sechium edule HOM05D025966 ORTHO05D003507 1.2e-06 57.0 95 38.9
Duzib150G0257 Durio zibethinus HOM05D004233 ORTHO05D003507 1.5e-06 56.6 116 38.8
Medtr7g067365 Medicago truncatula HOM05D004233 ORTHO05D003507 1.5e-06 56.6 72 44.4
Psat3g130680 Pisum sativum HOM05D004233 ORTHO05D003507 1.5e-06 56.6 87 39.1
BcaC07g42009 Brassica carinata HOM05D005325 ORTHO05D003507 2.0e-06 56.2 112 34.8
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 2.0e-06 56.2 117 35.9
Prupe.6G271900 Prunus persica HOM05D004233 ORTHO05D003507 2.0e-06 56.2 123 35.8
TPR.G29052 Trifolium pratense HOM05D004233 ORTHO05D003507 2.0e-06 56.2 107 38.3
Gohir.A07G102900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.6e-06 55.8 78 48.7
Sp1g06050 Schrenkiella parvula HOM05D005325 ORTHO05D003507 2.6e-06 55.8 94 38.3
Sed0021305 Sechium edule HOM05D004233 ORTHO05D003507 2.6e-06 55.8 118 34.7
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 3.4e-06 55.5 118 35.6
Prupe.6G060400 Prunus persica HOM05D012510 ORTHO05D015115 3.4e-06 55.5 116 36.2
C05p05370 Brassica napus HOM05D005325 ORTHO05D003507 4.5e-06 55.1 94 39.4
Oeu045519.1 Olea europaea HOM05D004233 ORTHO05D003507 4.5e-06 55.1 106 37.7
Lalb_Chr15g0089821 Lupinus albus HOM05D004233 ORTHO05D003507 5.9e-06 54.7 112 36.6
Ciclev10029412m.g Citrus clementina HOM05D004233 ORTHO05D003507 7.7e-06 54.3 95 43.2
Lalb_Chr13g0291241 Lupinus albus HOM05D004233 ORTHO05D003507 7.7e-06 54.3 97 39.2


User provided reference genes

Program Settings