Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G219600 Glycine max HOM05D000034 ORTHO05D014074 3.3e-52 208.0 97 100.0
TPR.G21292 Trifolium pratense HOM05D000034 ORTHO05D014074 2.1e-22 109.0 95 51.6
Lj6g0020842 Lotus japonicus HOM05D000034 ORTHO05D000037 7.4e-20 100.5 67 62.7
arahy.Tifrunner.gnm1.ann1.2H1MGU Arachis hypogaea HOM05D000034 ORTHO05D000037 5.8e-17 90.9 82 50.0
arahy.Tifrunner.gnm1.ann1.HX9YJ4 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.8e-17 90.9 92 43.5
TPR.G33386 Trifolium pratense HOM05D000034 ORTHO05D000037 7.6e-17 90.5 86 48.8
TPR.G19328 Trifolium pratense HOM05D000034 ORTHO05D000037 1.3e-16 89.7 97 46.4
arahy.Tifrunner.gnm1.ann1.9LP8WG Arachis hypogaea HOM05D000034 ORTHO05D000037 4.2e-15 84.7 91 41.8
arahy.Tifrunner.gnm1.ann1.B5SYFK Arachis hypogaea HOM05D000034 ORTHO05D000037 1.2e-14 83.2 125 33.6
arahy.Tifrunner.gnm1.ann1.Z9M9A1 Arachis hypogaea HOM05D000034 ORTHO05D014074 1.0e-13 80.1 61 55.7
arahy.Tifrunner.gnm1.ann1.T7DEQZ Arachis hypogaea HOM05D000034 ORTHO05D014074 7.4e-12 73.9 78 41.0
arahy.Tifrunner.gnm1.ann1.H3BLYN Arachis hypogaea HOM05D000034 ORTHO05D000037 8.2e-11 70.5 81 38.3
arahy.Tifrunner.gnm1.ann1.GU7PJV Arachis hypogaea HOM05D000034 ORTHO05D014074 3.1e-10 68.6 79 39.2
arahy.Tifrunner.gnm1.ann1.UAK3YW Arachis hypogaea HOM05D000034 ORTHO05D014074 3.1e-10 68.6 79 39.2
arahy.Tifrunner.gnm1.ann1.EDF0S4 Arachis hypogaea HOM05D000034 ORTHO05D014074 4.5e-09 64.7 70 44.3
arahy.Tifrunner.gnm1.ann1.V8FPGT Arachis hypogaea HOM05D000034 ORTHO05D000037 4.5e-09 64.7 76 40.8
CANSAT25G1749 Cannabis sativa HOM05D000034 ORTHO05D000037 4.5e-09 64.7 81 38.3
FvH4_4g20922 Fragaria vesca HOM05D000034 ORTHO05D000037 5.9e-09 64.3 74 40.5
FvH4_5g23912 Fragaria vesca HOM05D000034 ORTHO05D000037 5.9e-09 64.3 74 40.5
CANSAT25G0317 Cannabis sativa HOM05D000034 ORTHO05D000037 1.3e-08 63.2 69 40.6
CANSAT56G4166 Cannabis sativa HOM05D000034 ORTHO05D000037 1.3e-08 63.2 69 40.6
LjContig00272g0009285 Lotus japonicus HOM05D000034 ORTHO05D000037 1.7e-08 62.8 78 38.5
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 2.9e-08 62.0 68 44.1
Lj1g0007225 Lotus japonicus HOM05D000034 ORTHO05D000037 5.0e-08 61.2 75 36.0
Lj3g0017061 Lotus japonicus HOM05D000034 ORTHO05D000037 5.0e-08 61.2 78 37.2
arahy.Tifrunner.gnm1.ann1.X5RLQI Arachis hypogaea HOM05D000034 ORTHO05D000285 8.5e-08 60.5 94 36.2
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 8.5e-08 60.5 90 36.7
Nitab4.5_0003500g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000037 8.5e-08 60.5 54 44.4
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 1.1e-07 60.1 90 36.7
Lj1g0016720 Lotus japonicus HOM05D000034 ORTHO05D000037 1.1e-07 60.1 58 43.1
TWI38G1947 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.1e-07 60.1 84 38.1
CANSAT11G0430 Cannabis sativa HOM05D000034 ORTHO05D000037 1.4e-07 59.7 81 34.6
RcHm_v2.0_Chr2g0103971 Rosa chinensis HOM05D000034 ORTHO05D000037 2.5e-07 58.9 77 36.4
arahy.Tifrunner.gnm1.ann1.6EI20W Arachis hypogaea HOM05D000034 ORTHO05D000037 3.2e-07 58.5 99 34.3
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 3.2e-07 58.5 107 31.8
CANSAT21G2391 Cannabis sativa HOM05D000034 ORTHO05D000037 3.2e-07 58.5 69 39.1
CANSAT78G0143 Cannabis sativa HOM05D000034 ORTHO05D000037 3.2e-07 58.5 69 37.7
TPR.G31033 Trifolium pratense HOM05D000034 ORTHO05D000037 3.2e-07 58.5 54 44.4
PSO339G0716 Papaver somniferum HOM05D000034 ORTHO05D000037 4.2e-07 58.2 109 33.0
Nitab4.5_0000545g0010 Nicotiana tabacum HOM05D007579 ORTHO05D014074 5.5e-07 57.8 83 36.1
PSO170G6048 Papaver somniferum HOM05D000034 ORTHO05D000037 5.5e-07 57.8 116 31.9
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 7.2e-07 57.4 90 34.4
PSO455G0007 Papaver somniferum HOM05D000034 ORTHO05D000037 7.2e-07 57.4 109 32.1
TWI34G0569 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.2e-07 57.4 78 37.2
Lj1g0001620 Lotus japonicus HOM05D000034 ORTHO05D000037 9.3e-07 57.0 40 52.5
arahy.Tifrunner.gnm1.ann1.U3ELQH Arachis hypogaea HOM05D000034 ORTHO05D000037 1.2e-06 56.6 90 35.6
AUR62039525 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.6e-06 56.2 77 35.1
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-06 55.8 107 31.8
TWI32G1210 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.1e-06 55.8 79 34.2
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.1e-06 55.8 76 30.3
arahy.Tifrunner.gnm1.ann1.5QBM87 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-06 55.5 100 30.0
ECA234G2067 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.7e-06 55.5 54 40.7
TWI60G0194 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.7e-06 55.5 43 58.1
arahy.Tifrunner.gnm1.ann1.GG5U8X Arachis hypogaea HOM05D000876 ORTHO05D000285 3.6e-06 55.1 86 36.0
Rhsim04G0134000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.6e-06 55.1 89 34.8
arahy.Tifrunner.gnm1.ann1.J2XTQL Arachis hypogaea HOM05D000034 ORTHO05D000037 6.1e-06 54.3 52 44.2
TWI31G1184 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.1e-06 54.3 79 34.2
TWI53G0204 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.1e-06 54.3 79 34.2
TWI75G0521 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.1e-06 54.3 79 34.2
CANSAT25G1047 Cannabis sativa HOM05D000034 ORTHO05D000037 7.9e-06 53.9 58 41.4


User provided reference genes

Program Settings