Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 1.9e-81 307.8 211 100.0
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 2.0e-70 271.2 218 89.4
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 1.2e-54 218.8 217 76.0
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.0e-51 208.0 212 73.6
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 3.6e-48 197.2 212 66.5
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 1.8e-44 184.9 212 55.2
Glyma.14G184300 Glycine max HOM05D006739 ORTHO05D008402 9.8e-38 162.5 216 47.7
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 4.1e-36 157.1 214 53.7
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 4.1e-36 157.1 214 53.7
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 6.8e-31 139.8 213 50.7
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 1.5e-30 138.7 213 40.8
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 2.8e-24 117.9 129 51.2
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 1.8e-23 115.2 129 49.6
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 6.8e-23 113.2 132 47.0
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 2.6e-22 111.3 132 47.0
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 3.2e-20 104.4 169 55.0
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 5.4e-20 103.6 135 46.7
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 9.2e-20 102.8 100 54.0
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 1.2e-19 102.4 98 55.1
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 3.5e-19 100.9 113 54.0
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 6.0e-19 100.1 179 64.8
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 2.3e-18 98.2 98 57.1
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 2.3e-18 98.2 123 51.2
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 1.1e-17 95.9 109 54.1
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 2.5e-17 94.7 110 52.7
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 3.3e-17 94.4 120 45.8
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 9.5e-17 92.8 105 48.6
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 4.7e-16 90.5 159 55.3
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 3.1e-15 87.8 116 45.7
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 5.2e-15 87.0 107 46.7
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 6.8e-15 86.7 124 43.5
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 1.5e-14 85.5 108 45.4
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 1.5e-14 85.5 116 44.8
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.5e-14 85.5 116 44.8
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 4.4e-14 84.0 119 42.0
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.4e-14 84.0 196 55.1
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 2.2e-13 81.6 148 54.1
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 2.2e-13 81.6 142 72.5
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 2.2e-13 81.6 92 48.9
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 8.4e-13 79.7 94 50.0
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 1.4e-12 79.0 113 42.5
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 1.9e-12 78.6 114 42.1
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 1.9e-12 78.6 103 46.6
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 2.4e-12 78.2 94 50.0
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 2.4e-12 78.2 108 46.3
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 3.2e-12 77.8 85 51.8
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 5.4e-12 77.0 174 44.3
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 5.4e-12 77.0 103 45.6
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 7.1e-12 76.6 121 40.5
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 1.6e-11 75.5 120 40.8
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 2.7e-11 74.7 88 52.3
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 4.6e-11 73.9 104 44.2
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 4.6e-11 73.9 96 46.9
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 6.0e-11 73.6 75 49.3
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 6.0e-11 73.6 102 43.1
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 6.0e-11 73.6 99 43.4
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 7.8e-11 73.2 116 38.8
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 1.3e-10 72.4 91 42.9
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 1.7e-10 72.0 88 47.7
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 1.7e-10 72.0 102 42.2
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.7e-10 72.0 180 31.1
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 3.9e-10 70.9 96 42.7
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 5.1e-10 70.5 78 47.4
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 6.6e-10 70.1 85 47.1
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 6.6e-10 70.1 93 46.2
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 8.7e-10 69.7 89 46.1
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 1.1e-09 69.3 88 45.5
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 1.5e-09 68.9 57 56.1
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 2.5e-09 68.2 118 37.3
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 2.5e-09 68.2 91 46.2
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 3.3e-09 67.8 94 38.3
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 4.3e-09 67.4 93 39.8
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 4.3e-09 67.4 124 36.3
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 4.3e-09 67.4 118 36.4
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 4.3e-09 67.4 118 37.3
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 5.6e-09 67.0 89 42.7
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 7.3e-09 66.6 85 43.5
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 7.3e-09 66.6 57 54.4
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 9.6e-09 66.2 97 42.3
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 9.6e-09 66.2 88 47.7
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 9.6e-09 66.2 96 40.6
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 9.6e-09 66.2 56 55.4
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 9.6e-09 66.2 62 50.0
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 9.6e-09 66.2 104 42.3
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 1.6e-08 65.5 85 42.4
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 1.6e-08 65.5 85 42.4
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 2.8e-08 64.7 80 43.8
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.8e-08 64.7 99 40.4
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 4.7e-08 63.9 92 40.2
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.7e-08 63.9 107 36.4
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 6.2e-08 63.5 83 43.4
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 8.1e-08 63.2 87 46.0
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 8.1e-08 63.2 100 41.0
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.1e-07 62.8 87 42.5
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 1.4e-07 62.4 91 41.8
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 1.8e-07 62.0 194 52.1
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 4.0e-07 60.8 42 59.5
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 1.2e-06 59.3 113 37.2
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.2e-06 59.3 71 46.5
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.2e-06 59.3 71 46.5
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 1.5e-06 58.9 71 46.5
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 2.0e-06 58.5 61 52.5
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 3.4e-06 57.8 91 45.1
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.4e-06 57.8 89 39.3
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 7.6e-06 56.6 86 39.5


User provided reference genes

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