Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G210000 Glycine max HOM05D012119 ORTHO05D002375 4.1e-89 331.6 201 100.0
Glyma.02G210100 Glycine max HOM05D012119 ORTHO05D002375 7.3e-46 188.0 212 55.2
Glyma.14G177800 Glycine max HOM05D012119 ORTHO05D002375 2.9e-34 149.4 199 53.8
Lalb_Chr10g0102541 Lupinus albus HOM05D012119 ORTHO05D002375 1.4e-28 130.6 210 52.9
Glyma.02G210300 Glycine max HOM05D012119 ORTHO05D002375 8.9e-28 127.9 217 46.1
VMungo0647G1593 Vigna mungo HOM05D012119 ORTHO05D002375 5.8e-27 125.2 216 46.3
Phvul.008G177300 Phaseolus vulgaris HOM05D012119 ORTHO05D002375 1.1e-25 120.9 216 50.9
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 9.6e-22 107.8 219 42.9
arahy.Tifrunner.gnm1.ann1.9U5DT8 Arachis hypogaea HOM05D012119 ORTHO05D002375 7.6e-19 98.2 223 45.7
Medtr5g064840 Medicago truncatula HOM05D012119 ORTHO05D002375 6.4e-18 95.1 227 45.4
arahy.Tifrunner.gnm1.ann1.RDUL0C Arachis hypogaea HOM05D012119 ORTHO05D002375 8.4e-18 94.7 223 44.4
arahy.Tifrunner.gnm1.ann1.69RQXC Arachis hypogaea HOM05D012119 ORTHO05D002375 1.4e-17 94.0 219 40.2
Lalb_Chr17g0344311 Lupinus albus HOM05D012119 ORTHO05D002375 9.3e-17 91.3 134 43.3
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 5.8e-11 72.0 117 43.6
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 3.8e-10 69.3 140 43.6
arahy.Tifrunner.gnm1.ann1.HV7MU1 Arachis hypogaea HOM05D012119 ORTHO05D002375 4.2e-09 65.9 143 42.7
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 5.4e-09 65.5 154 33.1
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 9.3e-09 64.7 134 37.3
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 1.6e-08 63.9 107 42.1
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 2.7e-08 63.2 115 27.8
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 3.5e-08 62.8 121 47.1
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 1.0e-07 61.2 121 40.5
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.0e-07 61.2 134 37.3
arahy.Tifrunner.gnm1.ann1.3HQ27V Arachis hypogaea HOM05D012119 ORTHO05D002375 1.8e-07 60.5 70 60.0
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 3.9e-07 59.3 112 27.7
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 3.9e-07 59.3 127 35.4
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 3.9e-07 59.3 99 31.3
MELO3C011050.2 Cucumis melo HOM05D039494 ORTHO05D002375 5.1e-07 58.9 135 32.6
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 8.7e-07 58.2 128 35.2
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 8.7e-07 58.2 128 35.2
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 8.7e-07 58.2 95 31.6
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.5e-06 57.4 159 33.3
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 2.5e-06 56.6 127 34.6
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.3e-06 56.2 151 32.5
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 4.3e-06 55.8 68 52.9
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 4.3e-06 55.8 134 35.8
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.6e-06 55.5 68 52.9
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 9.6e-06 54.7 146 33.6


User provided reference genes

Program Settings