Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 6.1e-171 604.0 286 100.0
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 4.6e-163 577.8 283 95.8
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 3.3e-161 571.6 286 93.4
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 1.2e-158 563.1 286 91.6
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 3.7e-152 541.6 285 90.2
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 1.2e-150 536.6 284 87.7
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 1.1e-148 530.0 285 88.1
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 2.5e-148 528.9 284 86.3
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 4.2e-148 528.1 281 89.0
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 1.6e-147 526.2 284 85.9
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 2.1e-147 525.8 284 85.6
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 6.1e-147 524.2 284 84.5
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 1.4e-146 523.1 284 84.9
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 1.8e-146 522.7 284 85.2
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 2.3e-146 522.3 284 84.5
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 3.0e-146 521.9 284 85.6
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 3.0e-146 521.9 284 85.6
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 8.8e-146 520.4 284 83.8
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 8.8e-146 520.4 284 83.8
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 1.1e-145 520.0 284 83.8
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 1.5e-145 519.6 284 84.5
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.0e-145 519.2 284 84.2
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 3.3e-145 518.5 284 83.8
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 9.7e-145 516.9 284 84.2
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 1.7e-144 516.2 285 84.6
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 1.7e-144 516.2 285 84.6
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 1.7e-144 516.2 281 83.6
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 1.7e-144 516.2 284 83.5
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 2.8e-144 515.4 284 84.2
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 3.7e-144 515.0 284 83.1
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 3.7e-144 515.0 284 83.1
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 6.3e-144 514.2 285 83.9
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 6.3e-144 514.2 284 82.7
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 8.2e-144 513.8 284 81.3
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 1.1e-143 513.5 284 82.7
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 1.1e-143 513.5 283 84.1
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 1.1e-143 513.5 284 84.5
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 1.8e-143 512.7 281 84.0
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 1.8e-143 512.7 285 84.2
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 1.8e-143 512.7 281 85.8
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 3.1e-143 511.9 284 83.1
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 5.3e-143 511.1 286 82.9
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 7.0e-143 510.8 287 83.3
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 9.1e-143 510.4 284 82.0
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 1.2e-142 510.0 285 83.5
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.6e-142 508.8 283 83.7
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 4.5e-142 508.1 281 84.0
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 4.5e-142 508.1 284 82.0
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 5.9e-142 507.7 286 82.5
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 7.7e-142 507.3 284 80.3
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 1.0e-141 506.9 280 85.0
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.7e-141 506.1 284 82.0
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 1.7e-141 506.1 284 81.7
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 2.9e-141 505.4 284 82.0
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 6.5e-141 504.2 283 82.0
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 8.5e-141 503.8 283 83.0
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 1.5e-140 503.1 290 82.1
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 1.5e-140 503.1 286 82.5
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 4.2e-140 501.5 284 79.6
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 7.2e-140 500.7 284 82.4
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 9.4e-140 500.4 284 79.2
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 1.6e-139 499.6 288 80.9
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 2.1e-139 499.2 283 80.9
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 3.6e-139 498.4 282 81.9
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 4.7e-139 498.0 284 82.7
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 8.0e-139 497.3 284 80.3
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 1.0e-138 496.9 284 80.6
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 1.4e-138 496.5 285 80.0
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 1.8e-138 496.1 284 81.7
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.8e-138 496.1 283 80.2
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 3.0e-138 495.4 284 81.0
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 3.0e-138 495.4 286 80.4
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 4.0e-138 495.0 283 83.4
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 6.8e-138 494.2 283 79.5
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 1.2e-137 493.4 281 80.4
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 3.4e-137 491.9 284 79.6
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 4.4e-137 491.5 282 82.3
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 5.7e-137 491.1 284 79.9
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 5.7e-137 491.1 284 79.2
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 9.8e-137 490.3 284 80.3
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 8.3e-136 487.3 284 80.3
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 1.1e-135 486.9 272 80.5
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 3.1e-135 485.3 279 81.4
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 7.0e-135 484.2 284 79.6
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 7.0e-135 484.2 284 80.3
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 2.0e-134 482.6 284 78.5
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 4.5e-134 481.5 284 78.5
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 5.9e-134 481.1 297 78.8
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 5.9e-134 481.1 284 77.8
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 5.9e-134 481.1 284 77.8
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 5.9e-134 481.1 281 78.6
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 7.7e-134 480.7 284 78.9
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 7.7e-134 480.7 280 80.4
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 1.3e-133 479.9 284 78.2
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.7e-133 479.6 301 75.4
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 3.8e-133 478.4 284 77.5
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 1.1e-132 476.9 285 79.3
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 1.1e-132 476.9 270 81.9
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 1.9e-132 476.1 285 78.9
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 2.5e-132 475.7 285 78.9
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 2.5e-132 475.7 285 78.9
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 1.4e-130 469.9 284 76.8
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 5.2e-130 468.0 284 75.0
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 1.4e-127 459.9 282 75.9
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 7.0e-127 457.6 275 76.7
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 9.2e-127 457.2 329 67.2
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 1.9e-124 449.5 247 84.2
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 4.7e-123 444.9 277 74.0
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 8.0e-123 444.1 284 71.8
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 5.9e-118 427.9 274 74.1
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 6.6e-117 424.5 295 69.8
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 1.6e-115 419.9 279 70.3
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 2.3e-114 416.0 235 81.3
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 7.0e-111 404.4 233 79.8
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 8.6e-109 397.5 225 82.2
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 6.2e-107 391.3 278 68.3
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 6.8e-106 387.9 279 65.6
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 2.2e-104 382.9 278 65.8
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 4.3e-100 368.6 196 86.7
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 4.0e-98 362.1 219 77.6
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 1.4e-90 337.0 282 56.7
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 5.2e-90 335.1 272 62.9
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 2.2e-88 329.7 288 58.7
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 1.3e-80 303.9 171 84.8
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 4.9e-80 302.0 167 85.0
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 3.1e-74 282.7 258 52.3
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 2.0e-65 253.4 280 46.8
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 2.9e-64 249.6 291 48.5
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 2.5e-63 246.5 276 47.8
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 1.9e-60 236.9 231 53.2
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 2.1e-54 216.9 116 85.3
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 7.7e-49 198.4 103 87.4
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 2.0e-20 104.0 78 66.7
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 1.6e-14 84.3 78 55.1
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 1.0e-13 81.6 70 58.6
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 3.7e-11 73.2 56 57.1


User provided reference genes

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