Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 6.2e-34 146.7 67 100.0
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 5.6e-19 97.1 51 86.3
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 7.4e-19 96.7 51 84.3
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.3e-18 95.9 51 84.3
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 4.8e-18 94.0 51 80.4
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 4.8e-18 94.0 51 80.4
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 4.8e-18 94.0 51 82.4
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 4.8e-18 94.0 51 80.4
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 6.2e-18 93.6 51 80.4
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 6.2e-18 93.6 51 80.4
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 8.1e-18 93.2 51 80.4
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.1e-17 92.8 51 80.4
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 1.4e-17 92.4 51 78.4
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 3.1e-17 91.3 65 64.6
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 3.1e-17 91.3 57 70.2
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 6.9e-17 90.1 51 78.4
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 6.9e-17 90.1 51 74.5
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 9.0e-17 89.7 51 76.5
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 9.0e-17 89.7 51 74.5
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 9.0e-17 89.7 51 76.5
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.2e-16 89.4 51 74.5
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.5e-16 89.0 57 70.2
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.5e-16 89.0 51 72.5
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.5e-16 89.0 51 76.5
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 2.0e-16 88.6 51 74.5
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 2.0e-16 88.6 65 60.0
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 2.0e-16 88.6 50 78.0
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 2.0e-16 88.6 50 78.0
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.0e-16 88.6 51 74.5
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.0e-16 88.6 51 74.5
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 2.6e-16 88.2 51 74.5
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.6e-16 88.2 51 76.5
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 2.6e-16 88.2 51 72.5
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 2.6e-16 88.2 51 72.5
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 3.4e-16 87.8 51 72.5
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 3.4e-16 87.8 51 70.6
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 3.4e-16 87.8 51 70.6
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 3.4e-16 87.8 65 63.1
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 4.5e-16 87.4 51 72.5
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 4.5e-16 87.4 51 74.5
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 4.5e-16 87.4 51 74.5
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 4.5e-16 87.4 51 72.5
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 5.8e-16 87.0 51 74.5
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 5.8e-16 87.0 65 63.1
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 5.8e-16 87.0 51 74.5
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 7.6e-16 86.7 47 76.6
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 7.6e-16 86.7 51 70.6
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 7.6e-16 86.7 51 74.5
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 7.6e-16 86.7 51 70.6
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 9.9e-16 86.3 51 70.6
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.3e-15 85.9 51 70.6
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 1.3e-15 85.9 51 72.5
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.3e-15 85.9 57 68.4
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.7e-15 85.5 51 70.6
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 2.2e-15 85.1 51 66.7
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 2.9e-15 84.7 51 72.5
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 2.9e-15 84.7 51 70.6
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 2.9e-15 84.7 51 70.6
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 3.8e-15 84.3 51 68.6
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 4.9e-15 84.0 51 72.5
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 4.9e-15 84.0 51 72.5
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 4.9e-15 84.0 51 64.7
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 6.4e-15 83.6 51 70.6
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 6.4e-15 83.6 51 70.6
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 8.4e-15 83.2 51 68.6
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 8.4e-15 83.2 51 68.6
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 8.4e-15 83.2 46 80.4
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.9e-14 82.0 51 66.7
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 2.4e-14 81.6 51 68.6
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.4e-14 81.6 51 66.7
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.4e-14 81.6 51 66.7
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 3.2e-14 81.3 47 68.1
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 4.2e-14 80.9 51 64.7
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 4.2e-14 80.9 51 66.7
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 4.2e-14 80.9 51 66.7
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 4.2e-14 80.9 51 66.7
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 4.2e-14 80.9 51 66.7
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 4.2e-14 80.9 51 66.7
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 4.2e-14 80.9 51 68.6
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 7.1e-14 80.1 51 62.7
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 7.1e-14 80.1 51 62.7
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 7.1e-14 80.1 51 74.5
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 7.1e-14 80.1 51 68.6
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 9.3e-14 79.7 51 64.7
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 9.3e-14 79.7 50 70.0
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.2e-13 79.3 50 68.0
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 1.2e-13 79.3 51 68.6
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 1.6e-13 79.0 51 64.7
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 2.1e-13 78.6 50 68.0
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.1e-13 78.6 50 68.0
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 2.1e-13 78.6 50 68.0
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 2.1e-13 78.6 50 68.0
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 3.5e-13 77.8 53 66.0
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 4.6e-13 77.4 50 66.0
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 4.6e-13 77.4 52 67.3
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 6.0e-13 77.0 51 66.7
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 6.0e-13 77.0 57 59.6
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 7.9e-13 76.6 50 64.0
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 7.9e-13 76.6 50 64.0
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 7.9e-13 76.6 50 64.0
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 7.9e-13 76.6 51 66.7
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 7.9e-13 76.6 51 66.7
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 7.9e-13 76.6 50 64.0
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 1.0e-12 76.3 51 62.7
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.3e-12 75.9 50 64.0
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 5.1e-12 73.9 46 67.4
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 8.7e-12 73.2 44 65.9
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 4.3e-11 70.9 46 63.0
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 1.1e-09 66.2 46 60.9
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 1.4e-09 65.9 46 58.7
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 1.7e-07 58.9 46 58.7


User provided reference genes

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