Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 6.1e-114 414.1 197 100.0
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 9.5e-91 337.0 182 91.8
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 5.2e-81 304.7 181 82.9
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 3.2e-78 295.4 181 81.2
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 9.6e-75 283.9 174 78.2
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 5.2e-73 278.1 180 72.2
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 5.8e-72 274.6 181 75.7
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 5.8e-72 274.6 181 75.7
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 5.8e-72 274.6 181 75.7
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 1.5e-67 260.0 179 68.7
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 4.3e-67 258.5 179 68.2
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 4.3e-67 258.5 185 68.1
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 9.6e-67 257.3 179 68.2
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 9.6e-67 257.3 176 68.2
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 9.6e-67 257.3 178 67.4
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 9.6e-67 257.3 179 68.7
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 1.6e-66 256.5 168 70.8
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 3.1e-65 252.3 178 66.9
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 6.9e-65 251.1 179 65.9
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 9.0e-65 250.8 192 66.7
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 9.0e-65 250.8 179 65.9
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 2.0e-64 249.6 179 65.9
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 2.0e-64 249.6 212 61.3
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 4.4e-64 248.4 179 66.5
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 7.6e-64 247.7 179 64.2
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 9.9e-64 247.3 181 65.2
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 9.9e-64 247.3 178 63.5
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 1.3e-63 246.9 179 67.6
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 1.3e-63 246.9 180 66.7
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 2.9e-63 245.7 193 62.2
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 3.8e-63 245.4 178 63.5
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 6.4e-63 244.6 188 61.7
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 3.2e-62 242.3 179 62.6
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 4.2e-62 241.9 174 63.8
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 4.2e-62 241.9 175 66.9
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 9.3e-62 240.7 174 62.6
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 2.7e-61 239.2 178 62.4
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 3.5e-61 238.8 164 69.5
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 6.0e-61 238.0 194 60.8
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 6.0e-61 238.0 179 63.1
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 6.0e-61 238.0 179 63.1
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 7.8e-61 237.7 179 62.6
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 1.3e-60 236.9 181 61.9
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 1.7e-60 236.5 188 60.1
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 2.3e-60 236.1 179 60.3
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 3.0e-60 235.7 181 63.0
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 3.9e-60 235.3 182 61.0
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 3.9e-60 235.3 179 62.6
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 3.9e-60 235.3 164 65.9
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 6.6e-60 234.6 182 60.4
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 1.1e-59 233.8 181 63.0
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 1.5e-59 233.4 179 64.2
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 1.5e-59 233.4 175 65.1
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 1.5e-59 233.4 175 65.1
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 1.5e-59 233.4 181 62.4
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 3.3e-59 232.3 171 62.6
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 4.3e-59 231.9 175 64.6
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 1.3e-58 230.3 182 61.5
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 2.8e-58 229.2 178 60.7
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 2.8e-58 229.2 177 62.1
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 2.8e-58 229.2 173 61.3
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 4.8e-58 228.4 178 61.2
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 3.1e-57 225.7 178 58.4
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 6.9e-57 224.6 181 56.4
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 1.3e-55 220.3 222 53.2
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 4.9e-55 218.4 179 58.1
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 9.3e-54 214.2 178 56.2
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 9.3e-54 214.2 159 63.5
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 1.2e-53 213.8 173 59.5
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 3.0e-52 209.1 177 58.8
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 3.7e-50 202.2 178 56.2
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 2.0e-48 196.4 190 50.5
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 2.6e-48 196.1 178 53.9
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 1.7e-47 193.4 137 68.6
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 3.8e-47 192.2 145 64.1
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.2e-45 187.2 172 54.1
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 2.7e-45 186.0 136 66.9
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.5e-43 180.3 172 51.7
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 2.8e-42 176.0 179 48.0
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 3.7e-42 175.6 138 58.7
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 5.0e-39 165.2 174 47.7
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 3.5e-37 159.1 148 54.7
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 4.6e-37 158.7 179 43.0
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 1.0e-36 157.5 138 57.2
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 1.3e-34 150.6 195 42.1
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 5.5e-30 135.2 173 43.4
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 2.1e-29 133.3 85 69.4
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 2.3e-28 129.8 101 62.4
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 2.3e-28 129.8 148 48.6
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 5.1e-28 128.6 239 36.4
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 1.5e-27 127.1 86 74.4
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 6.3e-26 121.7 123 51.2
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.6e-24 116.3 90 61.1
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 1.7e-23 113.6 179 31.3
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 2.5e-22 109.8 99 52.5
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 3.2e-22 109.4 87 56.3
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 1.6e-21 107.1 121 47.9
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 4.4e-19 99.0 88 56.8
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 3.6e-13 79.3 101 42.6
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.9e-06 57.0 39 61.5
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 3.2e-06 56.2 55 47.3


User provided reference genes

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