Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 3.7e-152 541.6 285 100.0
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 2.0e-105 386.3 286 74.8
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 3.4e-73 279.3 292 59.9
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 2.4e-71 273.1 271 62.7
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 1.3e-69 267.3 281 59.1
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 2.0e-65 253.4 275 57.5
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 3.4e-65 252.7 206 71.4
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 5.8e-65 251.9 280 56.1
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 1.2e-62 244.2 283 56.9
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 3.0e-45 186.4 215 56.7
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 3.9e-45 186.0 303 43.6
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 4.8e-43 179.1 302 44.4
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 1.4e-42 177.6 303 41.9
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 5.3e-42 175.6 295 43.4
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 9.0e-42 174.9 212 53.8
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 1.2e-41 174.5 307 42.3
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.5e-41 174.1 311 43.7
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 2.6e-41 173.3 299 42.8
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 2.6e-41 173.3 310 40.6
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 2.6e-41 173.3 173 57.2
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 7.7e-41 171.8 185 57.8
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 7.7e-41 171.8 305 42.6
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.0e-40 171.4 309 42.1
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 1.4e-39 167.5 301 42.9
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 3.6e-38 162.9 309 40.8
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 3.6e-38 162.9 309 40.8
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 4.6e-38 162.5 306 38.9
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 7.9e-38 161.8 309 40.8
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 1.8e-37 160.6 292 41.4
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 3.0e-37 159.8 310 42.3
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 6.7e-37 158.7 289 43.6
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 8.8e-37 158.3 285 42.8
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.3e-36 156.0 285 42.1
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 7.4e-36 155.2 178 56.2
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 7.4e-36 155.2 244 46.3
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 9.7e-36 154.8 283 40.3
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.2e-35 153.7 281 41.3
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 2.2e-35 153.7 312 40.1
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 8.2e-35 151.8 188 52.1
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 8.2e-35 151.8 293 41.3
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 1.4e-34 151.0 302 41.7
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 1.4e-34 151.0 276 41.3
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.4e-34 150.2 286 41.3
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 4.1e-34 149.4 278 39.6
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 5.3e-34 149.1 241 45.6
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 5.3e-34 149.1 278 39.9
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 6.9e-34 148.7 300 42.7
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 6.9e-34 148.7 251 42.6
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 9.1e-34 148.3 213 48.4
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 9.1e-34 148.3 286 40.9
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 9.1e-34 148.3 328 39.3
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 9.1e-34 148.3 184 51.1
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 1.5e-33 147.5 273 41.8
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.5e-33 147.5 300 40.0
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 1.5e-33 147.5 299 39.1
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 3.4e-33 146.4 301 38.5
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 5.9e-33 145.6 300 39.3
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 8.5e-32 141.7 283 40.6
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 2.5e-31 140.2 296 41.2
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 1.2e-30 137.9 293 41.3
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 1.2e-30 137.9 315 38.1
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.6e-30 137.5 156 56.4
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 2.1e-30 137.1 304 39.1
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 4.7e-30 136.0 307 39.7
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 4.7e-30 136.0 290 37.6
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 7.9e-30 135.2 298 37.6
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 1.0e-29 134.8 120 65.0
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 5.1e-29 132.5 325 38.8
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 6.7e-29 132.1 311 37.9
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 8.8e-29 131.7 317 35.3
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 3.3e-28 129.8 152 52.0
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 3.3e-28 129.8 160 51.9
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 2.2e-27 127.1 285 39.3
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 3.7e-27 126.3 301 37.2
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 8.2e-27 125.2 268 39.2
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 1.1e-26 124.8 278 40.3
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 1.1e-26 124.8 278 40.3
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 1.1e-26 124.8 278 40.3
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 1.8e-26 124.0 161 50.9
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 5.3e-26 122.5 297 37.7
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 1.2e-25 121.3 281 38.8
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 1.2e-25 121.3 281 38.1
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 1.2e-25 121.3 281 38.1
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 1.5e-25 120.9 297 36.7
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.0e-25 120.6 251 39.8
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 7.7e-25 118.6 220 43.6
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 7.7e-25 118.6 268 38.4
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 2.2e-24 117.1 284 38.4
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.9e-24 116.7 248 39.9
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.8e-24 116.3 177 51.4
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 5.0e-24 115.9 177 49.2
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 8.5e-24 115.2 303 36.0
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 3.2e-23 113.2 277 38.3
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 2.1e-22 110.5 197 41.1
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 3.6e-22 109.8 291 36.4
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 8.0e-22 108.6 155 46.5
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 8.0e-22 108.6 154 53.2
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 8.0e-22 108.6 282 36.9
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 1.0e-21 108.2 232 38.8
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 1.8e-21 107.5 294 37.8
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 2.3e-21 107.1 154 48.7
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 2.3e-21 107.1 144 54.2
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 2.3e-21 107.1 292 34.6
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.2e-21 105.9 136 51.5
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 1.5e-20 104.4 201 45.3
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 2.0e-20 104.0 179 40.2
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 2.8e-19 100.1 255 36.1
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 2.8e-19 100.1 258 33.7
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 6.3e-19 99.0 305 33.4
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 3.1e-18 96.7 205 40.5
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 7.0e-18 95.5 304 31.2
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 9.1e-18 95.1 149 46.3
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 3.5e-17 93.2 300 32.0
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 5.9e-17 92.4 61 75.4
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 2.2e-16 90.5 219 37.0
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 3.2e-15 86.7 178 38.2
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 7.2e-15 85.5 102 52.9
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.1e-14 84.0 81 63.0
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 8.8e-13 78.6 58 67.2
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 2.5e-07 60.5 66 53.0


User provided reference genes

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