Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G151900 Glycine max HOM05D010368 ORTHO05D012190 1.9e-68 262.3 129 100.0
Glyma.10G022300 Glycine max HOM05D010368 ORTHO05D012190 1.2e-41 173.3 135 73.3
VMungo0720G0366 Vigna mungo HOM05D010368 ORTHO05D012190 2.7e-38 162.2 135 66.7
Phvul.007G167000 Phaseolus vulgaris HOM05D010368 ORTHO05D012190 3.1e-26 122.1 137 55.5
arahy.Tifrunner.gnm1.ann1.Q37X17 Arachis hypogaea HOM05D010368 ORTHO05D012190 5.2e-21 104.8 139 53.2
arahy.Tifrunner.gnm1.ann1.H1EMIC Arachis hypogaea HOM05D010368 ORTHO05D012190 3.4e-20 102.1 139 52.5
Glyma.19G205600 Glycine max HOM05D010368 ORTHO05D012190 9.8e-20 100.5 131 52.7
Lalb_Chr21g0306691 Lupinus albus HOM05D010368 ORTHO05D012190 1.4e-18 96.7 131 53.4
Phvul.001G201500 Phaseolus vulgaris HOM05D010368 ORTHO05D012190 3.5e-17 92.0 137 51.1
Ca_10379_v3 Cicer arietinum L. HOM05D010368 ORTHO05D012190 1.3e-16 90.1 131 48.1
Ca_29657_v3 Cicer arietinum L. HOM05D010368 ORTHO05D012190 1.3e-16 90.1 131 48.1
Lj5g0010442 Lotus japonicus HOM05D010368 ORTHO05D012190 3.9e-16 88.6 128 49.2
Lj1g0028076 Lotus japonicus HOM05D010368 ORTHO05D012190 1.1e-15 87.0 115 56.5
Psat3g025200 Pisum sativum HOM05D010368 ORTHO05D012190 2.8e-14 82.4 137 47.4
Lalb_Chr18g0047521 Lupinus albus HOM05D010368 ORTHO05D012190 2.6e-12 75.9 133 43.6
TPR.G32300 Trifolium pratense HOM05D010368 ORTHO05D012190 5.8e-12 74.7 132 47.0
Medtr7g107570 Medicago truncatula HOM05D010368 ORTHO05D012190 3.7e-11 72.0 140 43.6
Glyma.03G208400 Glycine max HOM05D010368 ORTHO05D012190 6.4e-11 71.2 133 45.9
Lalb_Chr04g0259681 Lupinus albus HOM05D010368 ORTHO05D012190 2.4e-10 69.3 119 43.7
arahy.Tifrunner.gnm1.ann1.0LJ8PX Arachis hypogaea HOM05D010368 ORTHO05D012190 7.0e-10 67.8 128 43.8
Lalb_Chr02g0143041 Lupinus albus HOM05D010368 ORTHO05D012190 7.8e-09 64.3 140 40.0
Hma1.2p1_0209F.1_g089180 Hydrangea macrophylla HOM05D009515 ORTHO05D010550 8.6e-08 60.8 133 37.6
Nn3g21250 Nelumbo nucifera HOM05D009515 ORTHO05D010550 8.6e-08 60.8 143 36.4
Duzib211G0224 Durio zibethinus HOM05D009515 ORTHO05D010550 1.5e-07 60.1 142 36.6
CSS0013047 Camellia sinensis var. sinensis HOM05D009515 ORTHO05D010550 5.6e-07 58.2 141 36.2
Duzib133G0496 Durio zibethinus HOM05D009515 ORTHO05D010550 5.6e-07 58.2 144 37.5
Manes.05G069200 Manihot esculenta HOM05D009515 ORTHO05D010550 9.5e-07 57.4 142 38.0
Atru.chr5.1291 Acer truncatum HOM05D009515 ORTHO05D010550 2.1e-06 56.2 166 34.3
Duzib138G0019 Durio zibethinus HOM05D009515 ORTHO05D010550 2.1e-06 56.2 143 37.1
Eucgr.K03430 Eucalyptus grandis HOM05D012100 ORTHO05D010550 3.6e-06 55.5 127 37.0
Gohir.D08G079900 Gossypium hirsutum HOM05D009515 ORTHO05D010550 8.1e-06 54.3 136 37.5
Gorai.004G084900 Gossypium raimondii HOM05D009515 ORTHO05D010550 8.1e-06 54.3 136 37.5
TAR365G0883 Trochodendron aralioides HOM05D012100 ORTHO05D010550 8.1e-06 54.3 137 37.2


User provided reference genes

Program Settings