Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.3e-152 543.1 288 100.0
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 6.8e-130 467.6 291 90.0
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 1.4e-119 433.3 292 80.5
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 3.2e-111 405.6 308 75.3
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 3.5e-110 402.1 299 76.6
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 3.9e-109 398.7 300 76.0
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 6.6e-109 397.9 250 88.8
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 2.1e-107 392.9 293 75.8
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 4.8e-107 391.7 301 75.1
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 8.1e-107 391.0 298 74.2
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.1e-99 366.3 300 69.3
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 1.2e-97 360.5 297 71.0
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 9.9e-97 357.5 294 68.4
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.7e-96 356.7 302 66.6
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.8e-93 346.7 287 68.3
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.5e-92 343.6 299 65.9
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.5e-92 342.8 301 64.8
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.5e-92 342.8 295 66.1
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.3e-91 340.5 297 63.6
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 2.8e-91 339.3 303 65.3
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 8.1e-91 337.8 224 77.2
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 6.9e-90 334.7 259 70.3
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 4.5e-89 332.0 271 66.4
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 7.1e-87 324.7 291 64.6
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 9.3e-87 324.3 287 64.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.1e-86 323.2 301 63.8
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 4.6e-86 322.0 268 66.4
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 4.6e-86 322.0 297 61.3
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 7.9e-86 321.2 223 74.0
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 5.7e-84 315.1 274 63.9
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.6e-83 313.5 216 73.6
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 3.7e-83 312.4 291 59.5
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.4e-82 310.5 273 63.0
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 5.3e-82 308.5 224 70.5
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.5e-81 307.0 287 61.7
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 2.0e-81 306.6 221 70.6
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 2.6e-81 306.2 271 62.4
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.2e-80 303.1 264 63.6
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.2e-80 303.1 290 59.0
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 2.2e-80 303.1 287 59.2
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 2.2e-80 303.1 262 63.0
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.5e-79 299.7 215 73.5
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.5e-79 299.7 215 73.5
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 5.5e-79 298.5 287 59.2
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 7.2e-79 298.1 271 60.9
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 9.3e-79 297.7 227 70.0
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.1e-78 296.6 340 55.3
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.6e-78 295.8 297 57.9
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 4.6e-78 295.4 225 65.8
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 6.1e-78 295.0 294 58.2
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.8e-77 293.5 290 57.9
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.9e-77 292.4 251 62.5
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 5.1e-77 292.0 286 59.4
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 8.7e-77 291.2 215 72.1
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.1e-76 290.8 289 58.1
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.5e-76 289.7 225 64.9
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.3e-76 288.9 285 57.5
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 7.4e-76 288.1 266 60.5
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 7.4e-76 288.1 256 64.8
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 9.7e-76 287.7 225 67.1
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.3e-75 287.3 212 70.8
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 4.8e-75 285.4 222 68.5
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 4.8e-75 285.4 193 75.1
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 8.2e-75 284.6 263 59.3
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.1e-74 284.3 295 55.9
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.1e-74 284.3 290 56.9
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 4.1e-74 282.3 293 57.3
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 1.5e-73 280.4 293 57.3
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 3.4e-73 279.3 284 57.0
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 7.7e-73 278.1 207 69.6
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 3.2e-71 272.7 293 56.7
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.1e-70 270.0 262 59.2
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.6e-70 268.9 262 59.2
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 3.9e-69 265.8 228 62.7
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 3.9e-69 265.8 249 56.2
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 2.2e-67 260.0 175 74.3
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 2.2e-67 260.0 225 65.8
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.1e-66 256.1 269 55.8
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 6.9e-66 255.0 360 48.1
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 5.9e-65 251.9 256 58.6
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 7.7e-65 251.5 189 69.3
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.0e-64 251.1 276 55.4
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.2e-64 250.0 276 55.1
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 1.9e-63 246.9 222 55.9
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 5.5e-63 245.4 226 60.2
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 7.2e-63 245.0 236 53.4
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.6e-62 243.8 211 59.2
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.6e-62 243.8 312 50.3
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.0e-60 236.9 286 49.0
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 5.7e-60 235.3 175 72.6
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 9.7e-60 234.6 309 48.9
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.3e-59 234.2 264 52.7
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.3e-59 234.2 264 52.7
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 2.8e-59 233.0 289 50.5
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.2e-57 227.6 202 56.4
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 5.5e-55 218.8 243 53.1
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 2.1e-54 216.9 219 58.4
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 9.1e-50 201.4 148 70.3
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.6e-49 200.7 134 75.4
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.1e-46 190.3 228 50.0
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.7e-46 189.9 188 56.4
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 4.7e-46 189.1 190 60.5
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.4e-42 177.6 214 44.4
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 5.4e-42 175.6 222 48.2
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 7.0e-42 175.3 181 53.6
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 2.7e-41 173.3 217 50.7
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.5e-39 167.5 246 45.5
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 6.1e-38 162.2 143 55.2
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.8e-37 160.6 103 76.7
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.0e-36 157.1 304 39.1
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 1.1e-34 151.4 190 43.7
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 4.1e-34 149.4 165 55.8
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 9.2e-34 148.3 116 65.5
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 9.2e-26 121.7 130 53.8
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 5.6e-23 112.5 187 37.4
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 6.8e-21 105.5 192 37.0
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 1.5e-20 104.4 178 33.1
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.3e-16 91.3 114 46.5
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 4.0e-13 79.7 69 65.2
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 4.4e-12 76.3 90 48.9
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.2e-09 68.2 53 62.3
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 3.9e-08 63.2 45 71.1


User provided reference genes

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