Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 6.7e-60 233.8 117 100.0
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 7.7e-56 220.3 117 93.2
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 5.7e-43 177.6 113 75.2
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 3.3e-38 161.8 116 69.0
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 5.6e-22 107.8 91 58.2
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 1.2e-21 106.7 114 50.0
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 6.2e-21 104.4 97 52.6
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 2.4e-17 92.4 89 47.2
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 1.2e-16 90.1 91 49.5
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 8.6e-15 84.0 96 43.8
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 1.5e-14 83.2 100 43.0
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 3.3e-14 82.0 90 42.2
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.2e-13 80.1 88 44.3
QL08p042110 Quercus lobata HOM05D008138 ORTHO05D010043 2.1e-13 79.3 95 40.0
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 4.7e-13 78.2 94 44.7
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.7e-13 78.2 103 41.7
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 6.2e-13 77.8 99 40.4
Prupe.1G297700 Prunus persica HOM05D008138 ORTHO05D010043 8.1e-13 77.4 92 46.7
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.1e-12 77.0 92 39.1
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 3.1e-12 75.5 104 36.5
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.0e-12 75.1 93 40.9
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 2.0e-11 72.8 74 47.3
Gorai.013G098900 Gossypium raimondii HOM05D033109 ORTHO05D010043 2.0e-11 72.8 62 59.7
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 3.4e-11 72.0 89 39.3
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 4.4e-11 71.6 103 37.9
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 4.4e-11 71.6 109 35.8
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 5.8e-11 71.2 108 38.9
Ciclev10033630m.g Citrus clementina HOM05D008138 ORTHO05D010043 7.5e-11 70.9 91 40.7
QL10p055376 Quercus lobata HOM05D008138 ORTHO05D010043 1.3e-10 70.1 81 43.2
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.7e-10 69.7 93 37.6
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.2e-10 69.3 93 38.7
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.9e-10 68.9 93 37.6
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 2.9e-10 68.9 88 38.6
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.7e-10 68.6 93 38.7
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.7e-10 68.6 93 38.7
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.4e-10 67.8 92 37.0
Rhsim09G0118800 Rhododendron simsii HOM05D008138 ORTHO05D010043 6.4e-10 67.8 103 35.9
Gohir.A13G091345 Gossypium hirsutum HOM05D033109 ORTHO05D010043 8.3e-10 67.4 62 56.5
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.9e-09 66.2 93 37.6
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.9e-09 66.2 84 44.0
QL10p055072 Quercus lobata HOM05D008138 ORTHO05D010043 1.9e-09 66.2 93 41.9
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.4e-09 65.9 93 35.5
QL10p055255 Quercus lobata HOM05D008138 ORTHO05D010043 2.4e-09 65.9 112 33.9
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.2e-09 65.5 95 35.8
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.2e-09 65.5 95 35.8
Dinv33884 Davidia involucrata HOM05D008138 ORTHO05D010043 3.2e-09 65.5 93 36.6
QL10p055293 Quercus lobata HOM05D008138 ORTHO05D010043 4.1e-09 65.1 95 37.9
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 1.2e-08 63.5 73 46.6
QL10p055147 Quercus lobata HOM05D008138 ORTHO05D010043 1.6e-08 63.2 76 43.4
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 2.1e-08 62.8 94 35.1
QL10p055198 Quercus lobata HOM05D008138 ORTHO05D010043 2.7e-08 62.4 91 42.9
Cfa007720 Carpinus fangiana HOM05D008138 ORTHO05D010043 7.8e-08 60.8 78 37.2
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 7.8e-08 60.8 94 34.0
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 7.8e-08 60.8 95 34.7
QL10p055607 Quercus lobata HOM05D008138 ORTHO05D010043 7.8e-08 60.8 78 47.4
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.0e-07 60.5 87 36.8
Haze_14354 Corylus avellana HOM05D008138 ORTHO05D010043 1.3e-07 60.1 86 33.7
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 1.7e-07 59.7 107 36.4
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 8.6e-07 57.4 91 36.3
QL10p054634 Quercus lobata HOM05D008138 ORTHO05D010043 1.1e-06 57.0 86 39.5
Ciclev10022667m.g Citrus clementina HOM05D017113 ORTHO05D019028 4.3e-06 55.1 82 35.4
Ciclev10022596m.g Citrus clementina HOM05D017113 ORTHO05D019028 5.6e-06 54.7 110 33.6


User provided reference genes

Program Settings