Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 1.5e-189 666.0 336 100.0
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 1.4e-174 616.3 336 92.0
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 4.0e-174 614.8 336 91.7
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 5.6e-168 594.3 336 89.6
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 7.6e-165 583.9 320 91.2
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 2.9e-164 582.0 318 92.1
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 3.8e-164 581.6 328 88.4
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 2.4e-163 578.9 320 90.9
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 1.2e-162 576.6 334 87.4
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 3.5e-154 548.5 326 85.0
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 3.9e-137 491.9 331 76.4
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 9.7e-136 487.3 318 77.7
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.8e-134 483.0 335 73.4
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.5e-133 479.9 318 76.4
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 4.5e-133 478.4 318 77.0
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 2.2e-132 476.1 337 74.2
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 3.2e-131 472.2 342 70.5
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 4.2e-131 471.9 341 71.6
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 5.5e-131 471.5 337 73.6
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.2e-130 470.3 323 73.7
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 4.7e-130 468.4 323 74.3
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 6.1e-130 468.0 323 74.3
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 3.0e-129 465.7 323 73.7
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.2e-129 464.9 337 72.1
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 6.7e-129 464.5 337 72.1
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 6.7e-129 464.5 337 72.1
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 6.7e-129 464.5 338 70.4
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 2.0e-128 463.0 318 73.0
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 2.0e-128 463.0 323 75.5
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 2.6e-128 462.6 324 71.3
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 2.6e-128 462.6 327 72.2
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 2.6e-128 462.6 323 73.1
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 3.3e-128 462.2 346 70.2
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 3.3e-128 462.2 337 71.2
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 5.7e-128 461.5 319 73.4
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.3e-127 460.3 337 71.8
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 2.2e-127 459.5 318 73.0
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 2.8e-127 459.1 322 73.9
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 3.7e-127 458.8 318 73.0
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 3.7e-127 458.8 323 74.6
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 3.7e-127 458.8 323 73.4
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 1.4e-126 456.8 320 72.2
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 3.1e-126 455.7 318 72.3
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 4.1e-126 455.3 318 72.6
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 7.0e-126 454.5 340 70.9
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 9.1e-126 454.1 318 71.4
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 9.1e-126 454.1 335 69.6
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 9.1e-126 454.1 337 71.2
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 1.2e-125 453.8 327 71.3
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 1.6e-125 453.4 318 71.7
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 3.5e-125 452.2 321 72.6
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 7.7e-125 451.1 321 72.9
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 1.0e-124 450.7 335 68.7
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.7e-124 449.9 317 71.6
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 2.2e-124 449.5 327 69.7
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 5.0e-124 448.4 316 72.8
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 8.5e-124 447.6 316 72.8
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 1.5e-123 446.8 317 72.6
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.5e-123 446.8 341 69.2
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 3.2e-123 445.7 318 71.7
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 7.2e-123 444.5 327 70.0
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 1.2e-122 443.7 336 69.6
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 1.2e-122 443.7 317 70.3
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 2.7e-122 442.6 329 70.8
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 2.7e-122 442.6 318 71.1
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 5.2e-121 438.3 324 69.8
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.2e-120 437.2 318 70.4
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 9.7e-120 434.1 341 66.9
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 3.1e-118 429.1 340 67.6
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.2e-117 427.2 336 68.5
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 1.6e-117 426.8 308 71.4
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 4.5e-117 425.2 336 65.5
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 3.8e-116 422.2 310 69.4
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 4.2e-115 418.7 326 67.5
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 1.2e-114 417.2 319 69.6
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.8e-112 407.5 275 74.9
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 2.2e-111 406.4 275 73.1
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 4.1e-110 402.1 315 67.6
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 2.7e-109 399.4 319 66.1
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 4.2e-107 392.1 310 67.7
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 7.2e-107 391.3 320 63.8
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 7.5e-104 381.3 322 63.0
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.4e-102 377.1 325 62.2
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 1.3e-100 370.5 420 51.2
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 8.6e-100 367.9 390 55.6
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 1.9e-99 366.7 335 60.0
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 9.5e-99 364.4 270 70.7
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 5.2e-97 358.6 331 58.0
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 6.8e-97 358.2 316 60.8
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 1.1e-94 350.9 352 56.8
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 5.4e-94 348.6 363 54.8
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.7e-92 343.6 315 55.9
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 9.2e-86 321.2 313 53.7
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 1.6e-85 320.5 312 55.4
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.7e-76 290.4 203 70.9
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.4e-73 280.8 226 67.3
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 2.3e-68 263.5 292 49.7
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.1e-65 254.6 280 52.5
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 1.1e-57 228.0 164 73.8
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 6.0e-53 212.2 348 38.2
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 4.3e-51 206.1 298 39.3
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 4.5e-48 196.1 178 56.2
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 6.5e-47 192.2 187 58.3
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.0e-39 166.0 104 78.8
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.4e-38 164.5 117 65.0
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 5.1e-36 156.0 107 71.0
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 3.1e-17 93.6 228 35.5
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 1.1e-11 75.1 50 68.0
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 3.3e-11 73.6 76 55.3
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 5.9e-08 62.8 51 54.9


User provided reference genes

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