Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.1e-192 676.4 339 100.0
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.2e-173 613.2 339 89.4
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 6.5e-172 607.4 339 89.1
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 1.4e-150 536.6 344 79.7
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 7.0e-150 534.3 344 79.4
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 4.5e-149 531.6 341 78.6
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 2.5e-147 525.8 288 87.2
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.0e-140 503.8 342 75.7
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 1.8e-137 493.0 335 74.3
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 2.0e-136 489.6 325 75.4
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 2.8e-135 485.7 342 73.7
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.5e-133 478.8 341 72.1
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 5.9e-133 478.0 338 72.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 1.0e-132 477.2 289 77.5
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.3e-132 476.1 287 77.7
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.8e-132 475.3 287 77.7
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.5e-131 473.4 316 75.3
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.5e-131 473.4 287 77.4
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.9e-131 473.0 287 77.0
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 5.6e-131 471.5 310 76.1
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 9.5e-131 470.7 329 70.2
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 9.5e-131 470.7 284 78.9
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.2e-130 470.3 335 71.3
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.2e-130 470.3 287 78.7
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 2.1e-130 469.5 335 70.4
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.6e-130 468.8 329 69.6
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 6.1e-130 468.0 334 69.8
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 1.4e-129 466.8 312 72.8
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.8e-129 466.5 337 69.1
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.8e-129 466.5 396 64.1
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 4.4e-128 461.8 342 69.3
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 5.8e-128 461.5 337 70.9
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 2.2e-127 459.5 345 68.4
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.9e-127 459.1 301 73.1
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 2.9e-127 459.1 325 72.3
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 3.7e-127 458.8 311 73.0
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.1e-126 457.2 316 75.0
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.4e-126 456.8 329 69.3
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.4e-126 456.8 344 68.3
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.4e-126 456.1 310 73.2
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 2.4e-126 456.1 281 76.9
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 4.1e-126 455.3 290 75.9
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 7.0e-126 454.5 320 71.2
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 7.0e-126 454.5 300 73.0
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.6e-125 453.4 350 67.1
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.6e-125 453.4 350 66.9
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 4.6e-125 451.8 336 67.0
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 7.8e-125 451.1 305 72.1
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.7e-124 449.9 302 75.2
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 2.3e-124 449.5 306 72.9
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 6.6e-124 448.0 326 69.0
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 8.6e-124 447.6 291 74.9
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 3.3e-123 445.7 314 70.7
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 7.3e-123 444.5 279 76.3
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 3.6e-122 442.2 334 66.2
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 8.0e-122 441.0 280 73.9
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.4e-121 440.3 366 63.7
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 2.3e-121 439.5 279 73.8
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 3.1e-121 439.1 310 72.6
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 3.1e-121 439.1 336 66.4
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 4.0e-121 438.7 302 71.9
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 4.0e-121 438.7 284 72.9
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 6.8e-121 438.0 307 69.1
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.2e-120 437.2 286 72.4
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 1.5e-120 436.8 274 76.3
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 2.6e-120 436.0 262 77.1
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 5.8e-120 434.9 257 81.7
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 9.8e-120 434.1 320 68.4
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 9.8e-120 434.1 290 72.4
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.3e-119 433.7 309 69.3
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.7e-119 433.3 336 66.4
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 1.7e-119 433.3 332 66.3
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 2.9e-119 432.6 332 66.9
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 1.1e-118 430.6 312 69.2
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.4e-118 430.3 286 72.0
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.4e-118 430.3 254 78.3
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.9e-118 429.9 312 69.2
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 5.4e-118 428.3 308 68.5
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 9.2e-118 427.6 389 59.9
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.7e-117 426.0 306 68.0
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 7.8e-117 424.5 338 64.5
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.0e-116 424.1 409 57.9
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.2e-114 417.2 300 68.7
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 1.7e-111 406.8 280 70.4
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.9e-110 403.3 279 69.9
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.4e-110 402.9 318 63.5
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 4.1e-110 402.1 259 71.4
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.1e-109 399.8 409 52.3
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 2.7e-109 399.4 291 66.0
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 4.7e-106 388.7 243 75.7
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 8.9e-105 384.4 320 63.4
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.1e-99 367.5 332 58.4
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 2.1e-93 346.7 346 57.2
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 1.1e-91 340.9 311 52.1
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 1.3e-90 337.4 259 58.7
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.8e-90 335.5 295 62.7
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 3.4e-88 329.3 321 56.7
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 3.2e-86 322.8 272 59.2
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 4.6e-85 318.9 261 55.6
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.4e-81 307.4 259 57.1
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.2e-80 304.3 291 55.7
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 4.6e-77 292.4 222 68.9
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.8e-73 280.4 159 77.4
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.8e-66 255.8 151 80.1
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.2e-61 241.1 135 83.7
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.1e-59 234.6 134 83.6
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.3e-55 221.1 134 76.1
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.9e-54 217.2 271 39.9
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.8e-50 203.4 291 41.9
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.0e-44 183.3 136 58.8
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 7.7e-40 168.7 97 79.4
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.4e-33 147.9 311 30.2
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 6.5e-31 139.0 256 34.8
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.6e-29 134.4 281 33.1
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 7.8e-16 89.0 103 48.5
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 5.6e-14 82.8 73 52.1
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.7e-10 70.1 49 59.2


User provided reference genes

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