Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 4.0e-210 734.6 384 100.0
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 1.1e-175 620.2 380 84.5
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 4.8e-155 551.6 376 78.5
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 1.6e-142 510.0 386 71.8
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 7.7e-137 491.1 380 69.2
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 5.7e-132 474.9 380 63.2
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 9.4e-127 457.6 378 60.8
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 3.6e-126 455.7 381 60.9
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 1.6e-121 440.3 381 59.6
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 2.0e-121 439.9 366 62.0
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 7.7e-121 438.0 380 58.2
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 1.3e-120 437.2 380 57.6
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.7e-120 436.8 358 62.6
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 3.8e-120 435.6 382 58.9
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 6.5e-120 434.9 381 58.0
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 9.4e-119 431.0 379 57.8
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 1.6e-118 430.3 373 57.9
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 2.3e-117 426.4 380 57.9
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 3.0e-117 426.0 365 58.9
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 5.2e-117 425.2 380 56.3
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 8.8e-117 424.5 380 57.4
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 1.2e-116 424.1 380 55.5
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.0e-116 423.3 380 55.5
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 2.6e-116 422.9 380 57.4
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 7.5e-116 421.4 381 57.7
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 3.7e-115 419.1 380 55.3
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 6.3e-115 418.3 379 56.2
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 4.1e-114 415.6 359 58.8
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 4.1e-114 415.6 381 54.9
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.6e-113 413.7 356 58.4
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.0e-112 411.0 381 56.2
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 6.5e-112 408.3 381 56.2
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 5.5e-111 405.2 366 57.9
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 3.6e-110 402.5 381 55.1
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 2.3e-109 399.8 380 56.1
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 7.5e-108 394.8 380 54.2
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 1.3e-107 394.0 380 55.0
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 1.7e-107 393.7 379 53.8
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 6.3e-107 391.7 382 54.5
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 8.3e-107 391.3 380 52.1
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 3.1e-106 389.4 380 51.8
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 2.7e-105 386.3 379 52.8
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 5.9e-105 385.2 380 51.8
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.7e-104 383.6 366 54.4
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 2.3e-104 383.3 379 52.8
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 7.3e-103 378.3 379 51.2
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 9.5e-103 377.9 382 55.2
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 2.8e-102 376.3 381 53.5
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 2.6e-100 369.8 380 54.2
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.7e-99 367.1 380 51.6
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 4.9e-99 365.5 380 51.3
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 1.1e-98 364.4 364 48.6
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 1.6e-97 360.5 380 51.3
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 5.6e-95 352.1 320 55.6
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 7.3e-95 351.7 340 55.9
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 4.7e-94 349.0 381 50.1
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 2.3e-93 346.7 379 49.3
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 6.8e-93 345.1 380 47.4
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 9.8e-92 341.3 370 50.3
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.4e-90 336.7 379 47.0
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 3.2e-90 336.3 304 56.2
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.0e-88 331.3 382 45.3
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 6.6e-88 328.6 380 45.8
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.6e-86 323.9 406 43.3
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 4.0e-85 319.3 264 63.6
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 1.5e-84 317.4 382 46.3
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 2.6e-84 316.6 365 47.4
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 3.4e-84 316.2 368 47.8
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 7.5e-84 315.1 389 46.0
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 1.9e-82 310.5 269 60.2
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 7.8e-81 305.1 264 58.7
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 4.3e-79 299.3 366 44.8
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 7.3e-79 298.5 381 43.8
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.6e-78 297.4 382 40.6
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 2.8e-78 296.6 375 42.7
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 5.2e-77 292.4 382 40.6
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 1.5e-76 290.8 375 42.4
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 7.6e-76 288.5 381 41.2
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 4.9e-75 285.8 375 41.9
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 1.1e-74 284.6 381 42.3
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 1.3e-72 277.7 374 40.4
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 3.0e-72 276.6 381 40.4
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 3.9e-72 276.2 381 40.4
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 5.1e-72 275.8 475 37.1
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 5.8e-68 262.3 370 41.6
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 7.6e-68 261.9 266 53.8
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 6.6e-64 248.8 381 37.5
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.1e-63 248.1 256 50.0
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 7.3e-63 245.4 229 57.2
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.2e-58 229.9 379 37.2
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 4.8e-54 216.1 383 37.9
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 2.5e-47 193.7 371 36.1
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 1.1e-45 188.3 370 35.9
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 9.0e-45 185.3 368 35.6
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 1.8e-40 171.0 265 38.9
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 6.3e-38 162.5 120 69.2
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 6.3e-38 162.5 114 60.5
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 4.1e-37 159.8 210 42.9
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 5.1e-32 142.9 169 43.8
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.5e-31 141.4 135 54.8
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 3.3e-31 140.2 371 32.6
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 6.3e-30 136.0 326 34.7
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 6.3e-30 136.0 145 50.3
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 4.2e-26 123.2 264 35.2
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 1.5e-23 114.8 422 25.4
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.8e-21 107.8 147 43.5
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.3e-19 101.7 150 40.0
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.9e-18 97.8 100 50.0
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.2e-17 95.1 115 48.7


User provided reference genes

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