Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 3.0e-199 698.4 359 100.0
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 1.0e-191 673.3 359 95.3
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 7.8e-184 647.1 359 89.7
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 2.1e-173 612.5 363 85.1
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 2.1e-173 612.5 363 85.1
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 6.9e-172 607.4 374 87.4
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 6.9e-172 607.4 374 87.4
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 4.3e-166 588.2 367 82.6
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 7.4e-166 587.4 371 84.1
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 4.0e-164 581.6 364 81.9
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 2.8e-157 558.9 348 81.9
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 1.2e-155 553.5 360 77.5
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 1.9e-153 546.2 333 82.6
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 5.1e-151 538.1 363 74.7
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 1.1e-148 530.4 366 74.9
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 1.8e-148 529.6 363 76.6
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 2.4e-148 529.3 366 75.1
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 2.4e-148 529.3 369 74.3
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.2e-146 522.7 372 71.8
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.2e-146 522.7 372 71.8
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 2.9e-146 522.3 374 71.1
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.9e-146 522.3 374 71.1
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 2.9e-146 522.3 361 73.4
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 2.9e-146 522.3 359 73.5
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 3.8e-146 521.9 358 72.9
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 3.8e-146 521.9 360 73.1
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 1.4e-145 520.0 360 75.0
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 3.2e-145 518.8 360 72.8
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 4.2e-145 518.5 362 73.2
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 4.2e-145 518.5 358 72.6
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 5.5e-145 518.1 358 72.9
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 3.6e-144 515.4 365 73.7
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 4.6e-144 515.0 359 72.4
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 6.1e-144 514.6 363 74.1
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 1.8e-143 513.1 359 73.5
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 2.3e-143 512.7 362 74.3
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 3.9e-143 511.9 368 70.9
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 3.9e-143 511.9 359 74.4
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 8.8e-143 510.8 365 72.6
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 2.5e-142 509.2 362 71.8
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 3.3e-142 508.8 361 72.6
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 3.3e-142 508.8 370 70.5
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 3.3e-142 508.8 360 72.5
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 1.7e-141 506.5 365 72.6
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.4e-140 503.4 362 71.0
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 1.4e-140 503.4 361 72.3
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 1.2e-139 500.4 361 70.9
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 2.6e-139 499.2 364 70.9
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 5.9e-139 498.0 367 71.7
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 1.0e-138 497.3 365 68.8
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 1.3e-138 496.9 360 71.1
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.7e-138 496.5 368 70.7
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 2.9e-138 495.7 362 71.0
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 2.9e-138 495.7 366 70.8
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 1.4e-137 493.4 364 71.7
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.4e-137 493.4 367 70.0
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 4.2e-137 491.9 370 68.6
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 5.5e-137 491.5 444 61.9
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 1.2e-136 490.3 369 68.8
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 2.7e-136 489.2 364 69.2
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 7.9e-136 487.6 361 68.1
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 1.0e-135 487.3 370 68.1
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.3e-135 486.1 305 78.7
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 2.3e-135 486.1 370 67.8
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 2.3e-135 486.1 372 67.7
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 3.9e-135 485.3 364 68.1
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 6.7e-135 484.6 359 70.8
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 1.1e-134 483.8 371 67.7
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 1.1e-134 483.8 363 69.4
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 1.5e-134 483.4 370 66.8
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 2.0e-134 483.0 363 69.4
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 2.0e-134 483.0 363 69.4
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 2.6e-134 482.6 370 66.8
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 2.6e-134 482.6 370 66.8
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 3.3e-134 482.3 361 67.9
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 5.7e-134 481.5 365 67.9
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 9.7e-134 480.7 363 69.1
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 1.3e-133 480.3 370 66.2
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 1.3e-133 480.3 369 66.9
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 2.8e-133 479.2 362 67.4
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 3.7e-133 478.8 364 68.4
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 4.8e-133 478.4 379 69.9
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 2.4e-132 476.1 365 66.0
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 2.4e-132 476.1 359 68.2
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 5.3e-132 474.9 356 70.2
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 1.5e-131 473.4 361 67.9
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 2.0e-131 473.0 356 69.1
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 3.8e-130 468.8 370 65.7
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 2.7e-128 462.6 359 66.3
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 8.0e-128 461.1 335 71.9
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 8.0e-128 461.1 359 67.1
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 8.8e-127 457.6 363 65.0
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 3.3e-126 455.7 334 72.5
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 8.2e-125 451.1 368 63.3
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 1.1e-124 450.7 363 63.9
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 3.1e-124 449.1 335 69.3
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 9.1e-124 447.6 371 63.1
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 7.7e-123 444.5 375 63.7
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 2.2e-122 443.0 378 63.5
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 3.6e-120 435.6 359 62.4
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.3e-117 427.2 371 60.4
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 3.7e-117 425.6 359 61.3
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 3.1e-116 422.5 338 66.6
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 3.5e-115 419.1 359 61.3
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 1.5e-113 413.7 367 58.3
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 1.2e-110 404.1 291 72.2
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 9.8e-110 401.0 298 71.1
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 1.7e-109 400.2 306 64.7
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 2.9e-106 389.4 291 71.8
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 7.2e-105 384.8 308 62.7
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.1e-104 383.3 329 62.3
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.8e-103 380.2 360 56.1
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 3.7e-101 372.5 310 60.6
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 6.3e-101 371.7 194 91.2
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 7.0e-100 368.2 365 59.7
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 7.0e-100 368.2 233 77.3
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.5e-97 359.8 359 55.7
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 2.1e-96 356.7 194 86.6
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 8.9e-95 351.3 365 52.3
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 2.0e-94 350.1 194 86.1
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 2.6e-94 349.7 306 57.2
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 2.6e-94 349.7 310 58.4
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 9.8e-94 347.8 357 51.8
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 1.1e-92 344.4 293 61.4
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 2.3e-87 326.6 306 52.0
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 1.5e-70 270.8 153 83.7
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 3.1e-63 246.5 210 62.4
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.8e-59 231.9 126 85.7
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 1.2e-51 208.0 228 53.5
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 2.6e-46 190.3 100 90.0
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 7.6e-46 188.7 218 49.5
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.7e-43 180.3 91 90.1
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 1.8e-42 177.6 192 54.2
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 1.1e-33 148.3 88 81.8
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 1.9e-33 147.5 149 59.1
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 4.8e-32 142.9 101 73.3
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 8.2e-32 142.1 163 50.3
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 1.4e-26 124.8 73 78.1
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 2.3e-26 124.0 73 78.1
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.1e-23 115.2 167 43.7
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 9.1e-15 85.5 43 90.7
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.0e-10 72.0 134 38.8
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 2.8e-08 63.9 71 56.3


User provided reference genes

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