Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 9.6e-68 260.0 128 100.0
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 4.0e-58 228.0 130 90.8
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 2.8e-43 178.7 136 69.1
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 2.8e-43 178.7 125 72.8
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 6.1e-38 161.0 130 63.1
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 7.9e-38 160.6 128 64.8
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 4.3e-36 154.8 135 64.4
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 9.7e-36 153.7 125 64.0
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 1.0e-32 143.7 128 60.9
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 7.0e-26 120.9 102 64.7
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 5.5e-23 111.3 93 63.4
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 5.5e-23 111.3 93 63.4
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 5.5e-23 111.3 127 47.2
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 1.6e-22 109.8 127 50.4
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.6e-22 109.8 129 46.5
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.0e-21 105.5 128 44.5
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 3.0e-21 105.5 128 44.5
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 4.0e-21 105.1 132 43.9
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.0e-20 102.8 128 48.4
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.6e-20 102.4 128 47.7
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 3.3e-20 102.1 124 43.5
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 4.4e-20 101.7 129 48.1
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 5.7e-20 101.3 131 42.7
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 1.4e-18 96.7 134 44.0
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 3.1e-18 95.5 124 41.1
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 3.1e-18 95.5 130 42.3
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 4.1e-18 95.1 129 40.3
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.2e-17 93.6 129 40.3
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.2e-17 93.6 129 40.3
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.0e-17 92.8 129 41.9
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 2.6e-17 92.4 127 44.9
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 7.7e-17 90.9 134 38.8
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.3e-16 90.1 98 50.0
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.3e-16 90.1 129 38.8
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.3e-16 90.1 127 44.9
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 1.7e-16 89.7 132 38.6
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 2.2e-16 89.4 126 41.3
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 5.0e-16 88.2 131 41.2
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 5.0e-16 88.2 98 48.0
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 8.5e-16 87.4 121 38.8
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 8.5e-16 87.4 127 43.3
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 1.1e-15 87.0 114 46.5
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 1.1e-15 87.0 127 38.6
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 2.5e-15 85.9 127 35.4
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 3.2e-15 85.5 128 41.4
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 5.5e-15 84.7 134 39.6
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 5.5e-15 84.7 131 38.9
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 7.2e-15 84.3 124 40.3
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 9.4e-15 84.0 126 42.1
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.2e-14 83.6 132 38.6
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 1.2e-14 83.6 125 41.6
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 2.1e-14 82.8 99 43.4
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 2.7e-14 82.4 88 48.9
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 4.7e-14 81.6 102 46.1
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 4.7e-14 81.6 129 38.0
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 4.7e-14 81.6 123 43.1
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 4.7e-14 81.6 121 36.4
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.8e-13 79.7 99 43.4
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 5.2e-13 78.2 100 42.0
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 1.5e-12 76.6 114 36.0
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 2.6e-12 75.9 99 41.4
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 4.4e-12 75.1 118 44.1
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 4.4e-12 75.1 118 44.1
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 5.7e-12 74.7 100 39.0
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 9.8e-12 73.9 102 42.2
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 1.3e-11 73.6 100 42.0
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 2.2e-11 72.8 98 39.8
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 4.8e-11 71.6 128 42.2
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 6.3e-11 71.2 128 42.2
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 1.8e-10 69.7 97 41.2
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 1.8e-10 69.7 97 41.2
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.8e-10 69.7 104 37.5
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.4e-10 69.3 89 42.7
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 9.1e-10 67.4 87 41.4
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 1.2e-09 67.0 100 37.0
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 2.7e-09 65.9 129 33.3
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 4.5e-09 65.1 102 36.3
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 1.7e-08 63.2 67 46.3
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 6.5e-08 61.2 91 42.9
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 8.5e-08 60.8 111 37.8
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.5e-07 60.1 131 34.4
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.9e-07 59.7 48 54.2
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.5e-07 59.3 77 42.9
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 4.2e-07 58.5 104 38.5
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 5.5e-07 58.2 106 35.8
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.1e-06 56.2 129 31.8
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 3.6e-06 55.5 96 38.5
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 3.6e-06 55.5 124 37.1
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 4.7e-06 55.1 126 37.3
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 6.1e-06 54.7 54 40.7
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 6.1e-06 54.7 86 36.0


User provided reference genes

Program Settings