Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G073500 Glycine max HOM05D008287 ORTHO05D010110 1.5e-44 182.6 98 100.0
Glyma.16G154900 Glycine max HOM05D008287 ORTHO05D010110 5.1e-37 157.5 98 92.9
Phvul.004G082500 Phaseolus vulgaris HOM05D008287 ORTHO05D010110 2.7e-30 135.2 98 81.6
VMungo0464G1886 Vigna mungo HOM05D008287 ORTHO05D010110 1.7e-27 125.9 85 78.8
TPR.G822 Trifolium pratense HOM05D008287 ORTHO05D010110 2.2e-16 89.0 99 57.6
Lalb_Chr19g0129701 Lupinus albus HOM05D008287 ORTHO05D010110 3.8e-16 88.2 99 60.6
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 8.0e-14 80.5 102 52.0
CsaV3_5G036300 Cucumis sativus L. HOM05D008287 ORTHO05D010110 2.6e-12 75.5 97 47.4
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 3.7e-11 71.6 101 50.5
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 4.8e-11 71.2 101 49.5
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 8.3e-11 70.5 97 45.4
Rhsim09G0151900 Rhododendron simsii HOM05D008287 ORTHO05D010110 1.1e-10 70.1 91 42.9
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 1.4e-10 69.7 87 47.1
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 1.4e-10 69.7 102 50.0
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 1.8e-10 69.3 102 48.0
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 2.4e-10 68.9 86 44.2
Medtr6g033505 Medicago truncatula HOM05D008287 ORTHO05D010110 2.4e-10 68.9 98 49.0
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 3.1e-10 68.6 106 43.4
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 3.1e-10 68.6 98 44.9
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 9.1e-10 67.0 89 46.1
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 9.1e-10 67.0 93 47.3
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 1.6e-09 66.2 98 48.0
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 1.6e-09 66.2 95 48.4
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 2.0e-09 65.9 89 44.9
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 2.7e-09 65.5 99 43.4
MBI10_g13401_MAGBIO Magnolia biondii HOM05D008287 ORTHO05D010110 2.7e-09 65.5 85 45.9
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 3.5e-09 65.1 92 43.5
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 7.7e-09 63.9 102 45.1
arahy.Tifrunner.gnm1.ann1.7IIA7U Arachis hypogaea HOM05D008287 ORTHO05D010110 1.0e-08 63.5 98 48.0
arahy.Tifrunner.gnm1.ann1.LAB5TB Arachis hypogaea HOM05D008287 ORTHO05D010110 1.7e-08 62.8 98 46.9
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 1.7e-08 62.8 98 43.9
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 1.7e-08 62.8 85 44.7
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 2.2e-08 62.4 86 45.3
Potri.010G222400 Populus trichocarpa HOM05D008287 ORTHO05D010110 2.9e-08 62.0 96 41.7
Sed0007335 Sechium edule HOM05D008287 ORTHO05D010110 6.5e-08 60.8 97 43.3
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 1.5e-07 59.7 88 38.6
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 1.9e-07 59.3 86 45.3
unitig_899.g14438 Utricularia gibba HOM05D008287 ORTHO05D010110 1.9e-07 59.3 85 42.4
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 2.5e-07 58.9 85 44.7
RcHm_v2.0_Chr1g0363411 Rosa chinensis HOM05D008287 ORTHO05D010110 4.2e-07 58.2 61 52.5
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 5.5e-07 57.8 86 44.2
Cfa021511 Carpinus fangiana HOM05D008287 ORTHO05D010110 1.6e-06 56.2 88 46.6
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 2.1e-06 55.8 98 40.8
ECA238G2524 Erigeron canadensis HOM05D008287 ORTHO05D010110 2.7e-06 55.5 96 39.6
AT5G49015 Arabidopsis thaliana HOM05D013386 ORTHO05D010110 6.1e-06 54.3 97 41.2
Lsat_1_v5_gn_2_114761 Lactuca sativa HOM05D008287 ORTHO05D010110 6.1e-06 54.3 85 38.8


User provided reference genes

Program Settings