Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G072400 Glycine max HOM05D004778 ORTHO05D005679 1.6e-19 98.6 56 100.0
Glyma.16G153600 Glycine max HOM05D004778 ORTHO05D005679 8.9e-18 92.8 56 94.6
Phvul.004G080600 Phaseolus vulgaris HOM05D004778 ORTHO05D005679 3.7e-16 87.4 56 89.3
VMungo0464G1949 Vigna mungo HOM05D004778 ORTHO05D005679 5.4e-15 83.6 56 83.9
Medtr7g085780 Medicago truncatula HOM05D004778 ORTHO05D005679 5.6e-12 73.6 60 76.7
Ca_08272_v3 Cicer arietinum L. HOM05D004778 ORTHO05D005679 7.3e-12 73.2 60 76.7
Lalb_Chr22g0359101 Lupinus albus HOM05D004778 ORTHO05D005679 1.4e-10 68.9 60 70.0
Lj1g0005970 Lotus japonicus HOM05D004778 ORTHO05D005679 1.8e-10 68.6 60 73.3
Medtr6g029260 Medicago truncatula HOM05D004778 ORTHO05D005679 4.0e-10 67.4 60 70.0
TPR.G5922 Trifolium pratense HOM05D004778 ORTHO05D005679 6.8e-10 66.6 60 68.3
TPR.G27230 Trifolium pratense HOM05D004778 ORTHO05D005679 8.9e-10 66.2 60 65.0
Rhsim13G0232700 Rhododendron simsii HOM05D004778 ORTHO05D005679 2.2e-08 61.6 62 62.9
Potri.019G035500 Populus trichocarpa HOM05D004778 ORTHO05D005679 3.7e-08 60.8 61 63.9
Sabra19G0043900 Salix brachista HOM05D004778 ORTHO05D005679 4.9e-08 60.5 61 60.7
Sabra19G0047200 Salix brachista HOM05D004778 ORTHO05D005679 4.9e-08 60.5 61 60.7
Glyma.16G040400 Glycine max HOM05D004778 ORTHO05D005679 6.4e-08 60.1 60 65.0
Hma1.2p1_0589F.1_g184910 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 8.3e-08 59.7 61 60.7
PGSC0003DMG400008381 Solanum tuberosum HOM05D004778 ORTHO05D005679 2.4e-07 58.2 62 61.3
Cfa001534 Carpinus fangiana HOM05D004778 ORTHO05D005679 4.1e-07 57.4 62 64.5
Gohir.D11G246400 Gossypium hirsutum HOM05D004778 ORTHO05D005679 4.1e-07 57.4 61 60.7
Gohir.A13G099600 Gossypium hirsutum HOM05D004778 ORTHO05D005679 5.4e-07 57.0 61 57.4
Duzib106G1560 Durio zibethinus HOM05D004778 ORTHO05D005679 7.0e-07 56.6 61 60.7
TAR633G1575 Trochodendron aralioides HOM05D004778 ORTHO05D005679 7.0e-07 56.6 61 62.3
Duzib177G0058 Durio zibethinus HOM05D004778 ORTHO05D005679 9.2e-07 56.2 61 60.7
Duzib106G0337 Durio zibethinus HOM05D004778 ORTHO05D005679 1.2e-06 55.8 61 59.0
Duzib128G0115 Durio zibethinus HOM05D004778 ORTHO05D005679 2.1e-06 55.1 62 62.9
TPR.G9135 Trifolium pratense HOM05D004778 ORTHO05D005679 2.1e-06 55.1 52 65.4
Nn2g15855 Nelumbo nucifera HOM05D004778 ORTHO05D005679 2.7e-06 54.7 61 57.4
Lalb_Chr02g0157141 Lupinus albus HOM05D004778 ORTHO05D005679 3.5e-06 54.3 61 55.7
Lalb_Chr20g0116241 Lupinus albus HOM05D004778 ORTHO05D005679 4.6e-06 53.9 60 56.7
MD03G1004000 Malus domestica HOM05D004778 ORTHO05D005679 4.6e-06 53.9 62 58.1
Thecc.05G250100 Theobroma cacao HOM05D004778 ORTHO05D005679 4.6e-06 53.9 61 57.4
TWI32G0653 Tripterygium wilfordii HOM05D004778 ORTHO05D005679 7.8e-06 53.1 61 55.7


User provided reference genes

Program Settings