Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G071800 Glycine max HOM05D003255 ORTHO05D003705 9.9e-106 386.7 187 100.0
Glyma.16G153000 Glycine max HOM05D003255 ORTHO05D003705 5.3e-91 337.8 183 91.3
Phvul.004G079500 Phaseolus vulgaris HOM05D003255 ORTHO05D003705 1.4e-72 276.6 184 76.6
VMungo0464G0063 Vigna mungo HOM05D003255 ORTHO05D003705 3.2e-72 275.4 184 73.9
Lj2g0018565 Lotus japonicus HOM05D003255 ORTHO05D003705 1.2e-71 273.5 183 75.4
Ca_21767_v3 Cicer arietinum L. HOM05D000813 ORTHO05D004282 4.7e-71 271.6 186 71.5
Lalb_Chr06g0173971 Lupinus albus HOM05D003255 ORTHO05D003705 2.8e-68 262.3 196 68.9
Medtr6g032880 Medicago truncatula HOM05D003255 ORTHO05D003705 2.8e-68 262.3 191 69.6
TPR.G34627 Trifolium pratense HOM05D003255 ORTHO05D003705 1.5e-64 250.0 188 67.6
Psat0s2522g0120 Pisum sativum HOM05D003255 ORTHO05D003705 1.2e-63 246.9 188 67.6
arahy.Tifrunner.gnm1.ann1.6P03AF Arachis hypogaea HOM05D003255 ORTHO05D003705 7.7e-58 227.6 187 63.1
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 1.7e-57 226.5 187 62.6
Rhsim03G0001300 Rhododendron simsii HOM05D003255 ORTHO05D003705 2.2e-44 183.0 188 49.5
Dinv14583 Davidia involucrata HOM05D003255 ORTHO05D003705 6.3e-44 181.4 190 51.6
CiPaw.10G000700 Carya illinoinensis HOM05D003255 ORTHO05D003705 2.4e-43 179.5 192 51.6
QL07p019728 Quercus lobata HOM05D003255 ORTHO05D003705 7.0e-43 177.9 187 52.4
QL07p020062 Quercus lobata HOM05D003255 ORTHO05D003705 7.0e-43 177.9 187 52.4
Haze_19413 Corylus avellana HOM05D003255 ORTHO05D003705 9.1e-43 177.6 192 50.0
TWI60G0442 Tripterygium wilfordii HOM05D003255 ORTHO05D003705 2.7e-42 176.0 195 47.7
Actinidia30556 Actinidia chinensis HOM05D003255 ORTHO05D003705 5.9e-42 174.9 186 50.0
Sabra19G0041900 Salix brachista HOM05D003255 ORTHO05D003705 5.9e-42 174.9 193 47.2
Gohir.A11G258700 Gossypium hirsutum HOM05D003255 ORTHO05D003705 1.3e-41 173.7 191 49.2
Cpa.g.sc51.108 Carica papaya HOM05D003255 ORTHO05D003705 2.3e-41 172.9 156 55.8
Potri.019G034000 Populus trichocarpa HOM05D003255 ORTHO05D003705 3.8e-41 172.2 193 46.1
Gohir.D11G268800 Gossypium hirsutum HOM05D003255 ORTHO05D003705 8.6e-41 171.0 190 47.9
vmacro12570 Vaccinium macrocarpon HOM05D003255 ORTHO05D003705 1.1e-40 170.6 188 47.9
Thecc.05G293800 Theobroma cacao HOM05D003255 ORTHO05D003705 1.5e-40 170.2 190 48.9
Prupe.7G003600 Prunus persica HOM05D003255 ORTHO05D003705 1.9e-40 169.9 201 48.8
TAR623G0562 Trochodendron aralioides HOM05D003255 ORTHO05D003705 1.9e-40 169.9 189 46.6
Duzib128G0833 Durio zibethinus HOM05D003255 ORTHO05D003705 2.5e-40 169.5 181 49.2
Gorai.007G288600 Gossypium raimondii HOM05D003255 ORTHO05D003705 2.5e-40 169.5 190 47.4
PSO339G1718 Papaver somniferum HOM05D003255 ORTHO05D003705 5.6e-40 168.3 174 48.3
Manes.09G142000 Manihot esculenta HOM05D003255 ORTHO05D003705 1.2e-39 167.2 192 47.4
Peaxi162Scf00076g01038 Petunia axillaris HOM05D003255 ORTHO05D003705 2.8e-39 166.0 196 46.4
PGSC0003DMG400008640 Solanum tuberosum HOM05D003255 ORTHO05D003705 4.7e-39 165.2 172 49.4
Lj2C357T24 Lonicera japonica HOM05D003255 ORTHO05D003705 6.1e-39 164.9 192 46.4
Solyc03g062710.4 Solanum lycopersicum HOM05D003255 ORTHO05D003705 6.1e-39 164.9 172 48.8
GSVIVG01033392001 Vitis vinifera HOM05D003255 ORTHO05D003705 6.1e-39 164.9 191 47.6
Actinidia22086 Actinidia chinensis HOM05D003255 ORTHO05D003705 1.0e-38 164.1 171 50.9
Sopen03g015020 Solanum pennellii HOM05D003255 ORTHO05D003705 1.4e-38 163.7 172 48.3
CANSAT56G4486 Cannabis sativa HOM05D003255 ORTHO05D003705 1.8e-38 163.3 188 48.4
Atru.chr2.1364 Acer truncatum HOM05D003255 ORTHO05D003705 3.0e-38 162.5 197 46.2
Nn7g35823 Nelumbo nucifera HOM05D003255 ORTHO05D003705 3.0e-38 162.5 151 53.0
MD14G1002400 Malus domestica HOM05D003255 ORTHO05D003705 4.0e-38 162.2 197 47.7
CAN.G317.14 Capsicum annuum HOM05D003255 ORTHO05D003705 3.4e-37 159.1 172 47.1
CSS0017996 Camellia sinensis var. sinensis HOM05D003255 ORTHO05D003705 1.3e-36 157.1 198 46.0
DCAR_013690 Daucus carota HOM05D003255 ORTHO05D003705 1.3e-36 157.1 185 44.3
Hma1.2p1_0376F.1_g139160 Hydrangea macrophylla HOM05D003255 ORTHO05D003705 1.7e-36 156.8 195 44.1
Lsat_1_v5_gn_6_36901 Lactuca sativa HOM05D003255 ORTHO05D003705 3.7e-36 155.6 190 45.8
Eucgr.K01496 Eucalyptus grandis HOM05D003255 ORTHO05D003705 6.4e-36 154.8 189 41.8
MELO3C008799.2 Cucumis melo HOM05D003255 ORTHO05D003705 1.4e-35 153.7 182 45.6
Nitab4.5_0002825g0020 Nicotiana tabacum HOM05D003255 ORTHO05D003705 1.8e-35 153.3 155 50.3
PGR142G1693 Punica granatum HOM05D003255 ORTHO05D003705 4.1e-35 152.1 187 44.4
HanXRQChr13g0398041 Helianthus annuus HOM05D003255 ORTHO05D003705 9.2e-35 151.0 187 44.9
CsaV3_4G013300 Cucumis sativus L. HOM05D003255 ORTHO05D003705 2.7e-34 149.4 182 42.3
ClCG04G005290 Citrullus lanatus HOM05D003255 ORTHO05D003705 5.9e-34 148.3 185 42.2
Oeu060006.1 Olea europaea HOM05D003255 ORTHO05D003705 5.9e-34 148.3 146 48.6
ECA233G3001 Erigeron canadensis HOM05D000074 ORTHO05D000696 7.8e-34 147.9 183 45.9
Ciclev10020539m.g Citrus clementina HOM05D003255 ORTHO05D003705 1.3e-33 147.1 153 49.0
Sed0011624 Sechium edule HOM05D003255 ORTHO05D003705 2.3e-33 146.4 190 42.6
AUR62032061 Chenopodium quinoa HOM05D003255 ORTHO05D003705 3.9e-33 145.6 157 46.5
Cc06_g22880 Coffea canephora HOM05D003255 ORTHO05D003705 5.6e-32 141.7 197 41.6
Nitab4.5_0000001g0080 Nicotiana tabacum HOM05D003255 ORTHO05D003705 5.6e-32 141.7 203 40.9
EL10Ac3g06815 Beta vulgaris HOM05D003255 ORTHO05D003705 3.6e-31 139.0 158 44.3
Aqoxy2G00586 Aquilegia oxysepala HOM05D003255 ORTHO05D003705 8.0e-31 137.9 146 45.2
Hund19240 Selenicereus undatus HOM05D003255 ORTHO05D003705 3.1e-30 136.0 146 50.7
MSTRG.19937 Avicennia marina HOM05D003255 ORTHO05D003705 1.2e-29 134.0 159 42.8
CDE02G4790 Ceratophyllum demersum HOM05D003255 ORTHO05D003705 2.0e-29 133.3 199 38.7
THA.LOC104805764 Tarenaya hassleriana HOM05D003255 ORTHO05D003705 2.6e-29 132.9 189 41.3
THA.LOC104807097 Tarenaya hassleriana HOM05D003255 ORTHO05D003705 2.6e-29 132.9 189 41.3
THA.LOC104816712 Tarenaya hassleriana HOM05D003255 ORTHO05D003705 2.6e-29 132.9 189 41.3
FvH4_1g28070 Fragaria vesca HOM05D003255 ORTHO05D003705 1.1e-27 127.5 187 41.7
FAN19G2054 Fragaria x ananassa HOM05D003255 ORTHO05D003705 1.4e-27 127.1 187 41.2
ATR0697G052 Amborella trichopoda HOM05D003255 ORTHO05D003705 3.2e-27 125.9 180 41.1
unitig_37.g12787 Utricularia gibba HOM05D003255 ORTHO05D003705 1.2e-26 124.0 163 41.7
Cfa016436 Carpinus fangiana HOM05D003255 ORTHO05D003705 1.7e-25 120.2 108 54.6
RcHm_v2.0_Chr3g0497181 Rosa chinensis HOM05D003255 ORTHO05D003705 2.5e-24 116.3 190 41.1
AUR62032686 Chenopodium quinoa HOM05D003255 ORTHO05D003705 2.1e-23 113.2 105 49.5
Cfa008478 Carpinus fangiana HOM05D000001 ORTHO05D000003 2.8e-23 112.8 177 41.8
Hma1.2p1_2695F.1_g327030 Hydrangea macrophylla HOM05D003255 ORTHO05D003705 3.6e-23 112.5 192 37.5
AL1G63430 Arabidopsis lyrata HOM05D003255 ORTHO05D003705 4.0e-22 109.0 161 42.9
FAN26G2862 Fragaria x ananassa HOM05D003255 ORTHO05D003705 6.8e-22 108.2 151 41.7
Ah.13g075320 Amaranthus hybridus HOM05D003255 ORTHO05D003705 8.9e-22 107.8 147 42.2
Carub.0001s4389 Capsella rubella HOM05D003255 ORTHO05D003705 8.9e-22 107.8 159 42.1
A06p00210 Brassica napus HOM05D003255 ORTHO05D003705 1.2e-21 107.5 159 44.0
BraA06t23237Z Brassica rapa HOM05D003255 ORTHO05D003705 1.2e-21 107.5 159 44.0
Migut.J01893 Erythranthe guttata HOM05D003255 ORTHO05D003705 1.5e-21 107.1 158 37.3
SEGI_06106 Sequoiadendron giganteum HOM05D003255 ORTHO05D003705 3.4e-21 105.9 140 37.1
Os03g0748300 Oryza sativa ssp. japonica HOM05D003255 ORTHO05D003705 7.5e-21 104.8 176 36.9
Aa31LG10G1180 Aethionema arabicum HOM05D003255 ORTHO05D003705 2.2e-20 103.2 138 37.0
Zm00001eb057170 Zea mays HOM05D003255 ORTHO05D003705 2.9e-20 102.8 188 35.6
CARHR045040 Cardamine hirsuta HOM05D003255 ORTHO05D003705 4.9e-20 102.1 191 35.6
Thhalv10011597m.g Eutrema salsugineum HOM05D003255 ORTHO05D003705 4.9e-20 102.1 146 43.8
Sp1g41050 Schrenkiella parvula HOM05D003255 ORTHO05D003705 8.3e-20 101.3 144 43.8
AT1G55370 Arabidopsis thaliana HOM05D003255 ORTHO05D003705 1.1e-19 100.9 159 42.1
Haze_11188 Corylus avellana HOM05D003255 ORTHO05D003705 4.3e-16 89.0 91 52.7
AagrBONN_evm.TU.Sc2ySwM_368.2197 Anthoceros agrestis HOM05D003255 ORTHO05D003705 4.7e-15 85.5 145 34.5
COL.COLO4_13608 Corchorus olitorius HOM05D003255 ORTHO05D003705 4.7e-15 85.5 66 60.6
Mapoly0135s0022 Marchantia polymorpha HOM05D003255 ORTHO05D003705 6.2e-15 85.1 187 33.2
BcaC08g43621 Brassica carinata HOM05D003255 ORTHO05D003705 8.1e-15 84.7 146 41.1
C06p10350 Brassica napus HOM05D003255 ORTHO05D003705 8.1e-15 84.7 146 41.1
BolC6t36111H Brassica oleracea HOM05D003255 ORTHO05D003705 8.1e-15 84.7 146 41.1
FAN17G0654 Fragaria x ananassa HOM05D003255 ORTHO05D003705 7.8e-10 68.2 99 39.4
FAN23G0456 Fragaria x ananassa HOM05D003255 ORTHO05D003705 1.1e-08 64.3 75 45.3
AagrBONN_evm.TU.Sc2ySwM_368.2200 Anthoceros agrestis HOM05D003255 ORTHO05D003705 3.6e-07 59.3 118 31.4
Rhsim09G0004800 Rhododendron simsii HOM05D003255 ORTHO05D003705 1.8e-06 57.0 42 64.3


User provided reference genes

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