Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 0.0e+00 1426.4 696 100.0
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 0.0e+00 1134.0 700 80.7
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 0.0e+00 1085.5 677 79.3
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 2.8e-278 961.8 697 68.9
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 1.4e-269 932.9 697 68.3
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 1.8e-269 932.6 694 67.9
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 2.4e-269 932.2 697 68.3
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 4.5e-252 874.8 677 67.4
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 9.1e-221 770.8 697 59.5
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 9.4e-210 734.2 676 58.7
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 1.4e-173 614.0 685 49.5
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 9.2e-165 584.7 689 45.9
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 1.6e-156 557.4 687 46.3
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 1.4e-149 534.3 697 44.0
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 3.2e-149 533.1 683 43.9
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 5.4e-149 532.3 698 44.6
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 3.9e-147 526.2 687 43.5
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 5.1e-147 525.8 695 44.0
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 8.7e-147 525.0 685 42.2
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 1.9e-146 523.9 719 43.4
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.4e-144 517.7 686 43.7
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 9.3e-141 505.0 725 41.9
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 1.6e-140 504.2 731 41.3
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.5e-140 503.1 674 43.8
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 1.8e-139 500.7 687 43.1
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 3.0e-139 500.0 691 42.8
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 3.9e-139 499.6 711 41.6
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 6.7e-139 498.8 688 42.9
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 1.5e-138 497.7 711 42.5
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 1.4e-136 491.1 701 42.1
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 5.3e-136 489.2 671 42.9
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 6.9e-136 488.8 680 42.1
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 3.0e-131 473.4 681 41.1
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 3.0e-131 473.4 617 42.9
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 1.9e-130 470.7 394 60.4
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 2.5e-130 470.3 695 41.6
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 5.7e-130 469.2 678 41.0
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 1.6e-129 467.6 686 40.2
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 3.4e-127 459.9 683 41.6
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 5.9e-127 459.1 687 39.3
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 9.7e-122 441.8 692 40.2
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 1.7e-121 441.0 621 40.9
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 3.1e-120 436.8 674 39.6
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 5.3e-120 436.0 726 38.6
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 1.3e-118 431.4 711 39.7
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 1.0e-115 421.8 679 36.8
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 1.8e-115 421.0 682 39.3
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 4.8e-113 412.9 686 38.8
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 6.3e-113 412.5 677 39.0
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 8.2e-113 412.1 691 37.2
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 2.6e-111 407.1 671 36.8
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 1.0e-110 405.2 686 38.0
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 1.3e-110 404.8 686 36.0
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 1.9e-109 401.0 676 38.6
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 5.5e-109 399.4 676 38.9
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 2.1e-108 397.5 680 37.6
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 1.0e-107 395.2 650 39.4
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 1.0e-107 395.2 649 38.5
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 1.0e-107 395.2 680 38.5
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 2.3e-107 394.0 655 38.8
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 6.7e-107 392.5 698 38.0
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 3.7e-105 386.7 690 36.5
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 6.3e-105 386.0 656 38.3
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 4.1e-104 383.3 753 36.1
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 5.3e-104 382.9 683 37.2
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 7.0e-104 382.5 642 38.3
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 4.5e-103 379.8 574 39.9
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 4.5e-103 379.8 687 35.8
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 7.7e-103 379.0 647 37.9
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 1.7e-102 377.9 606 39.1
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 2.2e-102 377.5 544 42.3
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 2.5e-101 374.0 688 37.2
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 5.5e-101 372.9 644 37.1
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 1.2e-100 371.7 560 39.5
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 8.0e-100 369.0 702 36.0
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 4.4e-98 363.2 706 36.4
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 9.7e-98 362.1 593 38.8
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 6.3e-97 359.4 682 35.8
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 4.1e-96 356.7 611 36.0
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 5.3e-96 356.3 678 36.1
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 1.3e-94 351.7 684 34.9
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 2.2e-94 350.9 597 39.0
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 3.8e-94 350.1 577 38.5
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 6.5e-94 349.4 704 34.4
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 4.7e-92 343.2 505 40.6
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.7e-89 334.7 713 33.5
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.8e-81 307.4 578 34.6
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 7.0e-80 302.8 538 36.6
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 1.0e-78 298.9 636 34.3
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 2.6e-74 284.3 416 39.9
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 2.6e-74 284.3 435 37.9
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 1.1e-72 278.9 432 38.9
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 7.0e-72 276.2 704 32.2
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 2.7e-71 274.2 675 30.8
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 2.7e-71 274.2 717 31.8
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 5.8e-66 256.5 366 41.3
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 2.2e-57 228.0 715 30.3
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 4.9e-57 226.9 385 38.2
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 3.8e-49 200.7 318 36.2
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 1.6e-47 195.3 330 39.4
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.4e-43 182.2 193 49.2
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 4.3e-37 160.6 371 32.9
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 1.1e-32 146.0 157 52.2
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 6.5e-25 120.2 157 40.8
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 2.7e-23 114.8 140 42.1
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 8.2e-20 103.2 91 53.8
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 8.2e-20 103.2 91 53.8
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 9.3e-16 89.7 98 50.0
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 1.6e-15 89.0 480 23.8
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 5.1e-14 84.0 394 23.1
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 4.3e-13 80.9 682 22.3
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.6e-12 79.0 218 28.9
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 2.4e-11 75.1 105 42.9
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 1.2e-07 62.8 309 25.9
arahy.Tifrunner.gnm1.ann1.6LA5S9 Arachis hypogaea HOM05D002494 ORTHO05D002673 2.1e-07 62.0 37 81.1
arahy.Tifrunner.gnm1.ann1.G2N9P3 Arachis hypogaea HOM05D000296 ORTHO05D008244 3.6e-07 61.2 30 93.3
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.0e-06 59.7 82 43.9
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 5.1e-06 57.4 93 36.6


User provided reference genes

Program Settings