Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 6.0e-176 621.3 465 100.0
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 9.2e-161 570.9 470 91.9
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 6.2e-149 531.6 406 88.9
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 3.9e-143 512.3 407 87.2
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 6.7e-119 431.8 410 74.4
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 1.1e-118 431.0 383 82.2
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.3e-117 427.6 416 75.0
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 1.6e-117 427.2 427 73.8
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 1.2e-115 421.0 415 73.7
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 2.0e-115 420.2 400 77.5
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.1e-113 414.5 414 76.1
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 2.4e-108 396.7 404 73.0
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 3.8e-106 389.4 412 73.3
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 3.2e-105 386.3 380 76.8
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 4.7e-104 382.5 406 68.7
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 7.9e-104 381.7 398 70.4
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 1.8e-103 380.6 420 70.2
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.8e-103 380.6 412 73.5
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 2.6e-102 376.7 396 73.7
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 5.7e-102 375.6 416 70.7
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 5.7e-102 375.6 408 72.1
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 9.7e-102 374.8 395 70.1
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 2.6e-99 366.7 403 68.2
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.0e-98 364.8 407 66.8
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.2e-98 363.6 391 68.8
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.6e-96 357.5 414 66.7
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 5.2e-95 352.4 410 70.0
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 6.7e-95 352.1 407 67.8
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.5e-94 350.9 408 69.6
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 5.7e-94 349.0 415 65.5
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 5.7e-94 349.0 390 70.5
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 1.7e-93 347.4 407 71.7
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 1.7e-93 347.4 402 57.2
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 6.3e-93 345.5 415 66.3
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 8.2e-93 345.1 409 65.3
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.1e-92 344.7 413 68.3
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 1.8e-92 344.0 409 66.5
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 7.0e-92 342.0 410 68.5
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 9.1e-92 341.7 408 70.1
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 1.2e-91 341.3 412 68.2
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 2.0e-91 340.5 394 68.3
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 2.0e-91 340.5 410 70.7
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 5.9e-91 339.0 404 69.8
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 5.9e-91 339.0 410 66.3
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 7.7e-91 338.6 406 65.3
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.0e-90 338.2 410 67.8
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 1.7e-90 337.4 408 65.9
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 6.5e-90 335.5 417 67.1
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.1e-89 334.7 407 70.0
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 1.1e-89 334.7 414 66.7
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 1.9e-89 334.0 396 67.9
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 3.2e-89 333.2 420 60.0
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 1.6e-88 330.9 211 88.2
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 2.7e-88 330.1 412 68.0
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.4e-87 327.8 393 65.4
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.4e-87 327.8 393 65.4
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 4.0e-87 326.2 409 64.3
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 6.8e-87 325.5 404 66.8
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 1.2e-86 324.7 209 87.1
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 4.4e-86 322.8 269 74.3
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 4.8e-85 319.3 401 57.4
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 8.3e-85 318.5 405 61.2
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 4.1e-84 316.2 407 64.4
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 5.9e-83 312.4 385 64.4
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.0e-82 311.6 404 66.6
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 1.0e-82 311.6 264 73.5
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 1.3e-82 311.2 410 67.3
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.7e-82 310.8 415 61.0
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 3.8e-82 309.7 396 67.9
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 3.8e-82 309.7 449 57.0
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 2.1e-80 303.9 415 64.8
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.4e-79 301.2 416 59.4
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.8e-76 290.8 436 62.4
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 4.1e-76 289.7 397 65.2
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 1.2e-75 288.1 416 62.7
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 4.5e-75 286.2 355 65.1
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 7.7e-75 285.4 418 62.9
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.7e-74 284.3 435 57.0
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 2.9e-74 283.5 230 71.7
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 3.8e-74 283.1 214 76.2
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 5.0e-74 282.7 213 77.9
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 8.6e-74 282.0 267 67.4
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.5e-73 281.2 419 57.8
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.5e-73 281.2 165 84.8
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 8.0e-72 275.4 288 59.0
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 1.5e-70 271.2 389 65.3
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 3.5e-67 260.0 160 78.8
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 3.9e-66 256.5 147 85.7
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 5.0e-66 256.1 212 69.8
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 5.6e-65 252.7 171 72.5
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 7.3e-65 252.3 165 76.4
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 9.5e-65 251.9 167 77.8
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 6.2e-64 249.2 215 69.8
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 8.0e-64 248.8 165 74.5
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 8.0e-64 248.8 165 74.5
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 8.0e-64 248.8 165 74.5
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 4.0e-63 246.5 165 73.9
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 1.2e-62 245.0 214 69.2
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 6.0e-59 232.6 296 55.4
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 5.0e-58 229.6 165 71.5
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 2.8e-56 223.8 164 68.3
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 2.2e-53 214.2 207 58.5
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.1e-51 207.6 359 61.0
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.9e-50 203.4 172 61.0
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 4.3e-49 199.9 163 63.8
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.4e-47 194.9 166 62.7
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.4e-47 194.9 166 62.7
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 1.5e-41 174.9 152 62.5
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 1.9e-33 147.9 165 51.5
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 1.7e-29 134.8 167 47.9
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 2.3e-26 124.4 166 44.6
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 3.2e-20 104.0 161 42.2
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 5.6e-17 93.2 139 41.0
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 1.1e-15 89.0 62 72.6
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 1.3e-10 72.0 95 46.3
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 8.7e-10 69.3 112 38.4
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 1.3e-08 65.5 85 45.9
Actinidia02775 Actinidia chinensis HOM05D006571 ORTHO05D007771 4.1e-07 60.5 87 48.3
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 1.5e-06 58.5 113 36.3


User provided reference genes

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