Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 1.9e-167 592.4 301 100.0
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 5.4e-146 521.2 308 87.0
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 2.1e-126 456.1 307 78.8
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 8.4e-123 444.1 306 75.5
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 2.5e-122 442.6 299 76.9
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 3.5e-121 438.7 298 76.8
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 3.9e-120 435.3 305 75.1
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 3.1e-117 425.6 305 74.1
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 1.5e-111 406.8 252 85.3
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 2.2e-110 402.9 286 74.5
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 1.7e-107 393.3 310 66.8
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 4.2e-106 388.7 299 67.6
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 2.3e-104 382.9 299 66.2
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.1e-103 380.6 265 71.7
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 3.3e-103 379.0 306 65.7
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 3.3e-103 379.0 290 67.9
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 7.4e-103 377.9 300 65.0
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.8e-101 373.2 300 65.3
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 2.4e-101 372.9 244 73.0
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 2.4e-101 372.9 252 71.0
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 3.1e-101 372.5 249 71.5
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 1.2e-100 370.5 259 71.0
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 1.5e-100 370.2 279 67.0
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 1.5e-100 370.2 304 65.1
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 3.4e-100 369.0 243 73.7
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 5.9e-100 368.2 270 69.3
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 7.7e-100 367.9 283 66.4
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 1.3e-99 367.1 243 72.8
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 2.2e-99 366.3 301 63.8
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 2.9e-99 365.9 253 70.4
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 3.8e-99 365.5 294 64.6
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 3.8e-99 365.5 275 68.0
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 3.8e-99 365.5 305 64.9
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 5.0e-99 365.2 290 65.9
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 5.0e-99 365.2 262 74.0
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 6.5e-99 364.8 302 62.6
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 6.5e-99 364.8 305 64.9
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 1.1e-98 364.0 267 67.8
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 1.4e-98 363.6 290 64.1
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 1.9e-98 363.2 301 64.5
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 9.4e-98 360.9 301 63.1
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 2.1e-97 359.8 272 65.8
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 2.7e-97 359.4 265 67.5
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 6.1e-97 358.2 298 62.8
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 8.0e-97 357.8 300 63.3
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 1.4e-96 357.1 243 70.4
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 3.0e-96 355.9 277 66.4
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 3.9e-96 355.5 302 62.6
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 1.1e-95 354.0 299 64.9
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.5e-95 353.6 272 67.3
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 2.0e-95 353.2 279 64.9
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 2.0e-95 353.2 252 68.3
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 2.6e-95 352.8 299 62.5
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 3.3e-95 352.4 288 66.0
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 4.4e-95 352.1 272 67.3
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 4.4e-95 352.1 305 61.0
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 1.7e-94 350.1 296 60.8
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 4.8e-94 348.6 299 61.5
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 6.3e-94 348.2 241 71.4
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 6.3e-94 348.2 247 69.6
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 6.3e-94 348.2 257 66.9
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 6.3e-94 348.2 257 66.9
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 2.4e-93 346.3 259 68.3
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 4.1e-93 345.5 276 64.5
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 7.0e-93 344.7 247 68.8
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 9.1e-93 344.4 288 63.5
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 3.5e-92 342.4 281 64.4
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.3e-91 340.5 279 63.4
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 5.0e-91 338.6 251 66.5
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 6.5e-91 338.2 294 64.3
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 1.1e-90 337.4 247 68.4
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 4.2e-90 335.5 258 64.3
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 2.1e-89 333.2 257 62.3
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 3.6e-89 332.4 265 66.0
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 3.0e-88 329.3 291 61.2
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 5.2e-88 328.6 292 60.6
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 6.7e-88 328.2 278 61.2
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 1.2e-87 327.4 252 65.9
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 2.0e-87 326.6 248 67.3
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 9.7e-87 324.3 222 70.7
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 1.7e-86 323.6 273 63.7
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 8.2e-86 321.2 236 69.1
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 2.4e-85 319.7 261 62.5
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 3.1e-85 319.3 239 66.9
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 7.0e-85 318.2 268 64.2
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 3.5e-84 315.8 276 62.3
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 4.2e-82 308.9 262 61.1
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 2.1e-81 306.6 300 56.3
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 1.0e-80 304.3 246 63.0
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 3.0e-80 302.8 235 64.3
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 5.2e-80 302.0 199 74.9
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 2.8e-78 296.2 248 62.5
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 2.4e-77 293.1 225 63.6
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.8e-72 276.9 250 58.0
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 2.0e-68 263.5 187 70.6
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 8.0e-65 251.5 270 53.0
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 1.4e-64 250.8 232 53.4
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 8.6e-59 231.5 300 48.7
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 4.3e-58 229.2 227 52.0
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 7.0e-53 211.8 227 45.4
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 4.7e-49 199.1 133 72.9
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 1.9e-42 177.2 249 41.0
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.3e-38 164.5 230 39.1
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.7e-38 164.1 250 42.0
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 1.5e-34 151.0 245 36.7
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 2.2e-30 137.1 91 70.3
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 2.2e-30 137.1 147 53.1
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 2.4e-24 117.1 85 63.5
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.3e-19 101.3 55 85.5
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 2.3e-19 100.5 100 52.0
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 2.0e-15 87.4 62 66.1
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 2.2e-14 84.0 104 48.1
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.0e-11 75.1 54 59.3
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.5e-10 71.2 52 57.7
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 4.8e-09 66.2 60 56.7
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 4.8e-09 66.2 60 56.7
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 1.4e-08 64.7 60 55.0
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.4e-06 55.5 55 49.1


User provided reference genes

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