Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G017550 Glycine max HOM05D005743 ORTHO05D007031 4.7e-64 247.7 121 100.0
GSVIVG01028023001 Vitis vinifera HOM05D005743 ORTHO05D007031 4.6e-27 124.8 76 76.3
FvH4_2g25770 Fragaria vesca HOM05D005743 ORTHO05D007031 5.9e-27 124.4 77 81.8
FAN24G1083 Fragaria x ananassa HOM05D005743 ORTHO05D007031 5.9e-27 124.4 77 81.8
MD03G1288600 Malus domestica HOM05D005743 ORTHO05D007031 5.9e-27 124.4 83 77.1
RcHm_v2.0_Chr6g0294071 Rosa chinensis HOM05D005743 ORTHO05D007031 5.9e-27 124.4 77 81.8
RcHm_v2.0_Chr6g0294081 Rosa chinensis HOM05D005743 ORTHO05D007031 5.9e-27 124.4 77 81.8
Sabra14G0095500 Salix brachista HOM05D005743 ORTHO05D007031 5.9e-27 124.4 65 90.8
SGA_v2.0_scaffold198G41143 Striga asiatica HOM05D005743 ORTHO05D007031 7.8e-27 124.0 79 78.5
Lj5g0015401 Lotus japonicus HOM05D005743 ORTHO05D007031 1.0e-26 123.6 77 79.2
Potri.014G128600 Populus trichocarpa HOM05D005743 ORTHO05D007031 1.0e-26 123.6 77 80.5
Atru.chr5.1142 Acer truncatum HOM05D005743 ORTHO05D007031 1.3e-26 123.2 77 80.5
Migut.N01507 Erythranthe guttata HOM05D005743 ORTHO05D007031 1.3e-26 123.2 77 79.2
Migut.O00421 Erythranthe guttata HOM05D005743 ORTHO05D007031 1.3e-26 123.2 77 79.2
Glyma.10G018000 Glycine max HOM05D005743 ORTHO05D007031 1.3e-26 123.2 77 80.5
Oeu046676.1 Olea europaea HOM05D005743 ORTHO05D007031 1.3e-26 123.2 83 74.7
Peaxi162Scf00399g00716 Petunia axillaris HOM05D005743 ORTHO05D007031 1.3e-26 123.2 76 80.3
PGR044G1461 Punica granatum HOM05D005743 ORTHO05D007031 1.3e-26 123.2 77 81.8
COL.COLO4_23341 Corchorus olitorius HOM05D005743 ORTHO05D007031 1.7e-26 122.9 83 73.5
FAN20G0637 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.7e-26 122.9 77 80.5
Lalb_Chr06g0166491 Lupinus albus HOM05D005743 ORTHO05D007031 1.7e-26 122.9 83 73.5
Prupe.8G261900 Prunus persica HOM05D005743 ORTHO05D007031 1.7e-26 122.9 83 74.7
Cpa.g.sc9.258 Carica papaya HOM05D005743 ORTHO05D007031 2.3e-26 122.5 83 74.7
Ciclev10019600m.g Citrus clementina HOM05D005743 ORTHO05D007031 2.3e-26 122.5 83 73.5
Cc01_g20880 Coffea canephora HOM05D005743 ORTHO05D007031 2.3e-26 122.5 83 74.7
FAN15G2676 Fragaria x ananassa HOM05D005743 ORTHO05D007031 2.3e-26 122.5 77 80.5
Nitab4.5_0002470g0070 Nicotiana tabacum HOM05D005743 ORTHO05D007031 2.3e-26 122.5 83 74.7
Nitab4.5_0005805g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 2.3e-26 122.5 83 74.7
Phvul.007G147000 Phaseolus vulgaris HOM05D005743 ORTHO05D007031 2.3e-26 122.5 77 79.2
Rhsim01G0285500 Rhododendron simsii HOM05D005743 ORTHO05D007031 2.3e-26 122.5 83 74.7
Solyc06g009130.3 Solanum lycopersicum HOM05D005743 ORTHO05D007031 2.3e-26 122.5 77 80.5
Sopen06g003890 Solanum pennellii HOM05D005743 ORTHO05D007031 2.3e-26 122.5 77 80.5
TPR.G33974 Trifolium pratense HOM05D005743 ORTHO05D007031 2.3e-26 122.5 83 73.5
CANSAT25G1370 Cannabis sativa HOM05D005743 ORTHO05D007031 3.0e-26 122.1 83 74.7
CAN.G1280.3 Capsicum annuum HOM05D005743 ORTHO05D007031 3.0e-26 122.1 83 74.7
CAN.G1989.8 Capsicum annuum HOM05D005743 ORTHO05D007031 3.0e-26 122.1 83 74.7
CiPaw.08G094900 Carya illinoinensis HOM05D005743 ORTHO05D007031 3.0e-26 122.1 77 79.2
Migut.D00150 Erythranthe guttata HOM05D005743 ORTHO05D007031 3.0e-26 122.1 77 77.9
QL12p028420 Quercus lobata HOM05D005743 ORTHO05D007031 3.0e-26 122.1 77 79.2
VMungo0720G3165 Vigna mungo HOM05D005743 ORTHO05D007031 3.0e-26 122.1 83 72.3
Actinidia24820 Actinidia chinensis HOM05D005743 ORTHO05D007031 3.9e-26 121.7 83 73.5
Aqoxy2G02938 Aquilegia oxysepala HOM05D005743 ORTHO05D007031 3.9e-26 121.7 83 75.9
arahy.Tifrunner.gnm1.ann1.39WPG8 Arachis hypogaea HOM05D005743 ORTHO05D007031 3.9e-26 121.7 83 74.7
AUR62008667 Chenopodium quinoa HOM05D005743 ORTHO05D007031 3.9e-26 121.7 77 77.9
AUR62025577 Chenopodium quinoa HOM05D005743 ORTHO05D007031 3.9e-26 121.7 77 77.9
ECA248G2514 Erigeron canadensis HOM05D005743 ORTHO05D007031 3.9e-26 121.7 77 77.9
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla HOM05D005743 ORTHO05D007031 3.9e-26 121.7 77 77.9
CSS0024650 Camellia sinensis var. sinensis HOM05D005743 ORTHO05D007031 5.0e-26 121.3 77 77.9
DCAR_005790 Daucus carota HOM05D005743 ORTHO05D007031 5.0e-26 121.3 83 72.3
PSO170G2277 Papaver somniferum HOM05D005743 ORTHO05D007031 5.0e-26 121.3 83 74.7
PSO407G0387 Papaver somniferum HOM05D005743 ORTHO05D007031 5.0e-26 121.3 83 74.7
Sc05g0003820 Simmondsia chinensis HOM05D005743 ORTHO05D007031 5.0e-26 121.3 83 73.5
Actinidia21045 Actinidia chinensis HOM05D005743 ORTHO05D007031 6.6e-26 120.9 59 93.2
Actinidia26720 Actinidia chinensis HOM05D005743 ORTHO05D007031 6.6e-26 120.9 59 93.2
Ah.08g213420 Amaranthus hybridus HOM05D005743 ORTHO05D007031 6.6e-26 120.9 77 77.9
Cfa005908 Carpinus fangiana HOM05D005743 ORTHO05D007031 6.6e-26 120.9 77 80.5
Dinv19686 Davidia involucrata HOM05D005743 ORTHO05D007031 6.6e-26 120.9 83 73.5
TAR362G0334 Trochodendron aralioides HOM05D005743 ORTHO05D007031 6.6e-26 120.9 83 73.5
arahy.Tifrunner.gnm1.ann1.V1RZF6 Arachis hypogaea HOM05D005743 ORTHO05D007031 8.6e-26 120.6 83 73.5
Duzib138G1616 Durio zibethinus HOM05D005743 ORTHO05D007031 8.6e-26 120.6 83 73.5
HanXRQChr13g0413001 Helianthus annuus HOM05D005743 ORTHO05D007031 8.6e-26 120.6 77 77.9
Manes.01G219600 Manihot esculenta HOM05D005743 ORTHO05D007031 8.6e-26 120.6 83 72.3
Medtr1g088430 Medicago truncatula HOM05D005743 ORTHO05D007031 8.6e-26 120.6 83 72.3
SalBow3G4402 Salvia bowleyana HOM05D005743 ORTHO05D007031 8.6e-26 120.6 77 77.9
THA.LOC104798829 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 8.6e-26 120.6 59 93.2
THA.LOC104827666 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 8.6e-26 120.6 59 93.2
Thecc.01G301000 Theobroma cacao HOM05D005743 ORTHO05D007031 8.6e-26 120.6 77 79.2
Ca_10331_v3 Cicer arietinum L. HOM05D005743 ORTHO05D007031 1.1e-25 120.2 59 91.5
Gorai.007G127900 Gossypium raimondii HOM05D005743 ORTHO05D007031 1.1e-25 120.2 77 77.9
Lj2A1195G24 Lonicera japonica HOM05D005743 ORTHO05D007031 1.1e-25 120.2 83 71.1
AL4G47180 Arabidopsis lyrata HOM05D005743 ORTHO05D007031 1.5e-25 119.8 76 77.6
MELO3C017953.2 Cucumis melo HOM05D005743 ORTHO05D007031 1.5e-25 119.8 83 73.5
CsaV3_4G000840 Cucumis sativus L. HOM05D005743 ORTHO05D007031 1.5e-25 119.8 83 73.5
Lsat_1_v5_gn_5_191280 Lactuca sativa HOM05D005743 ORTHO05D007031 1.5e-25 119.8 77 76.6
Sed0000130 Sechium edule HOM05D005743 ORTHO05D007031 1.5e-25 119.8 83 73.5
CARHR143000 Cardamine hirsuta HOM05D005743 ORTHO05D007031 1.9e-25 119.4 62 88.7
Gohir.D11G119400 Gossypium hirsutum HOM05D005743 ORTHO05D007031 1.9e-25 119.4 83 72.3
MBI18_g06031_MAGBIO Magnolia biondii HOM05D005743 ORTHO05D007031 1.9e-25 119.4 83 74.7
SalBow2G1764 Salvia bowleyana HOM05D005743 ORTHO05D007031 1.9e-25 119.4 77 79.2
Aa31LG1G28940 Aethionema arabicum HOM05D005743 ORTHO05D007031 2.5e-25 119.0 76 76.3
AT2G47600 Arabidopsis thaliana HOM05D005743 ORTHO05D007031 2.5e-25 119.0 59 93.2
Carub.0004s3033 Capsella rubella HOM05D005743 ORTHO05D007031 2.5e-25 119.0 59 93.2
CDE02G2026 Ceratophyllum demersum HOM05D005743 ORTHO05D007031 2.5e-25 119.0 77 76.6
Eucgr.K03488 Eucalyptus grandis HOM05D005743 ORTHO05D007031 2.5e-25 119.0 77 76.6
Nitab4.5_0001879g0130 Nicotiana tabacum HOM05D005743 ORTHO05D007031 3.3e-25 118.6 87 67.8
EL10Ac7g17510 Beta vulgaris HOM05D005743 ORTHO05D007031 4.3e-25 118.2 77 75.3
Thhalv10001391m.g Eutrema salsugineum HOM05D005743 ORTHO05D007031 4.3e-25 118.2 76 76.3
Hund18173 Selenicereus undatus HOM05D005743 ORTHO05D007031 4.3e-25 118.2 76 78.9
HPP92_016082 Vanilla planifolia HOM05D005743 ORTHO05D007031 4.3e-25 118.2 77 76.6
Peaxi162Scf00001g04234 Petunia axillaris HOM05D005743 ORTHO05D007031 5.6e-25 117.9 77 77.9
THA.LOC104817489 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 5.6e-25 117.9 77 75.3
TWI59G0198 Tripterygium wilfordii HOM05D005743 ORTHO05D007031 5.6e-25 117.9 59 91.5
ATR0706G014 Amborella trichopoda HOM05D005743 ORTHO05D007031 7.3e-25 117.5 77 76.6
FAN27G1322 Fragaria x ananassa HOM05D005743 ORTHO05D007031 7.3e-25 117.5 58 93.1
ClCG10G010970 Citrullus lanatus HOM05D005743 ORTHO05D007031 9.5e-25 117.1 58 94.8
Os11g0660000 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 9.5e-25 117.1 77 74.0
A05p00330 Brassica napus HOM05D005743 ORTHO05D007031 1.2e-24 116.7 59 89.8
C04p00250 Brassica napus HOM05D005743 ORTHO05D007031 1.2e-24 116.7 59 89.8
BolC4t21668H Brassica oleracea HOM05D005743 ORTHO05D007031 1.2e-24 116.7 59 89.8
BraA05t19031Z Brassica rapa HOM05D005743 ORTHO05D007031 1.2e-24 116.7 59 89.8
Psat6g165240 Pisum sativum HOM05D005743 ORTHO05D007031 1.2e-24 116.7 58 89.7
Zm00001eb165450 Zea mays HOM05D005743 ORTHO05D007031 2.8e-24 115.5 77 71.4
Gohir.A11G114301 Gossypium hirsutum HOM05D005743 ORTHO05D007031 3.6e-24 115.2 83 69.9
Nn4g25787 Nelumbo nucifera HOM05D005743 ORTHO05D007031 3.6e-24 115.2 58 91.4
Eucgr.K03487 Eucalyptus grandis HOM05D005743 ORTHO05D007031 4.7e-24 114.8 77 74.0
Hund18172 Selenicereus undatus HOM05D005743 ORTHO05D007031 2.3e-23 112.5 71 77.5
Sc05g0003780 Simmondsia chinensis HOM05D005743 ORTHO05D007031 3.4e-22 108.6 83 66.3
Zm00001eb407450 Zea mays HOM05D005743 ORTHO05D007031 5.8e-22 107.8 77 66.2
Haze_04942 Corylus avellana HOM05D005743 ORTHO05D007031 9.8e-22 107.1 104 61.5
Pp3c1_39250 Physcomitrium patens HOM05D005743 ORTHO05D007031 3.3e-17 92.0 60 66.7
AagrBONN_evm.TU.Sc2ySwM_344.5359 Anthoceros agrestis HOM05D005743 ORTHO05D007031 5.6e-17 91.3 59 72.9
Pp3c2_6060 Physcomitrium patens HOM05D005743 ORTHO05D007031 2.1e-16 89.4 60 68.3
SGA_v2.0_scaffold1G00362 Striga asiatica HOM05D005743 ORTHO05D007031 1.4e-15 86.7 64 71.9
Mapoly0134s0038 Marchantia polymorpha HOM05D005743 ORTHO05D007031 3.7e-13 78.6 83 50.6
SMO351G0556 Selaginella moellendorffii HOM05D005743 ORTHO05D007031 4.9e-13 78.2 58 58.6
AagrBONN_evm.TU.Sc2ySwM_368.1084 Anthoceros agrestis HOM05D005743 ORTHO05D007031 1.4e-12 76.6 60 55.0
Cre11.g479600 Chlamydomonas reinhardtii HOM05D005743 ORTHO05D007031 6.8e-07 57.8 72 36.1
BcaB02g08759 Brassica carinata HOM05D005743 ORTHO05D007031 1.5e-06 56.6 27 92.6
PRCOL_00004461 Prasinoderma coloniale HOM05D005743 ORTHO05D007031 3.4e-06 55.5 55 47.3


User provided reference genes

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