Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 5.4e-108 394.4 212 100.0
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 6.6e-82 307.8 208 84.6
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 5.0e-61 238.4 221 67.4
VMungo0720G2271 Vigna mungo HOM05D007468 ORTHO05D009051 2.8e-48 196.1 228 57.0
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 3.4e-46 189.1 232 54.3
Ca_10302_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 1.3e-40 170.6 180 59.4
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 6.3e-40 168.3 216 50.0
Lj5g0007724 Lotus japonicus HOM05D007468 ORTHO05D009051 3.6e-35 152.5 226 46.9
TPR.G19783 Trifolium pratense HOM05D007468 ORTHO05D009051 8.0e-35 151.4 250 46.8
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 5.2e-34 148.7 207 50.2
Lalb_Chr15g0078361 Lupinus albus HOM05D007468 ORTHO05D009051 1.1e-33 147.5 250 42.8
Medtr1g087720 Medicago truncatula HOM05D007468 ORTHO05D009051 9.7e-33 144.4 265 42.3
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 1.7e-32 143.7 180 50.0
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 2.2e-32 143.3 188 48.9
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 4.8e-32 142.1 186 50.0
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 7.7e-30 134.8 233 44.6
Lj1g0017695 Lotus japonicus HOM05D007468 ORTHO05D009051 6.5e-29 131.7 177 48.6
Glyma.03G218100 Glycine max HOM05D007468 ORTHO05D009051 9.4e-28 127.9 180 47.8
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 9.4e-28 127.9 223 43.9
Medtr7g109300 Medicago truncatula HOM05D007468 ORTHO05D009051 2.8e-24 116.3 276 35.9
Lalb_Chr08g0237891 Lupinus albus HOM05D007468 ORTHO05D009051 6.3e-24 115.2 203 40.4
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 1.2e-19 100.9 200 37.0
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 2.1e-19 100.1 219 38.8
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 3.6e-19 99.4 211 41.7
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 1.0e-18 97.8 191 39.8
Sed0007650 Sechium edule HOM05D007468 ORTHO05D009051 1.0e-18 97.8 198 37.4
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 2.3e-18 96.7 218 39.4
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 1.2e-17 94.4 189 39.7
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 2.6e-17 93.2 181 40.9
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 3.4e-17 92.8 186 38.2
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 3.4e-17 92.8 219 34.2
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 5.7e-17 92.0 173 38.2
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 7.5e-17 91.7 181 37.0
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 9.8e-17 91.3 201 36.8
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 2.8e-16 89.7 177 39.5
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 2.8e-16 89.7 178 38.8
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 4.9e-16 89.0 190 35.8
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 6.3e-16 88.6 184 37.0
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 6.3e-16 88.6 175 38.9
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 8.3e-16 88.2 188 37.8
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 8.3e-16 88.2 184 37.0
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 1.1e-15 87.8 186 39.2
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 1.8e-15 87.0 210 37.1
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 2.4e-15 86.7 184 37.0
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 3.1e-15 86.3 150 42.0
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 3.1e-15 86.3 186 37.6
VMungo1383G0307 Vigna mungo HOM05D007468 ORTHO05D009051 4.1e-15 85.9 219 35.2
CsaV3_4G001100 Cucumis sativus L. HOM05D007468 ORTHO05D009051 5.4e-15 85.5 179 38.5
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 7.0e-15 85.1 166 41.0
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 7.0e-15 85.1 165 38.8
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 5.9e-14 82.0 175 36.0
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 1.0e-13 81.3 191 36.6
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 3.8e-13 79.3 136 43.4
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 5.0e-13 79.0 198 36.4
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 6.6e-13 78.6 170 38.2
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 1.1e-12 77.8 145 42.1
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 1.5e-12 77.4 185 37.3
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.5e-12 77.4 195 35.4
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 1.9e-12 77.0 193 37.3
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 3.3e-12 76.3 187 37.4
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 4.3e-12 75.9 183 38.8
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 1.6e-11 73.9 173 38.7
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 2.1e-11 73.6 204 33.8
CiPaw.07G114800 Carya illinoinensis HOM05D007468 ORTHO05D009051 2.8e-11 73.2 136 39.0
Prupe.8G269500 Prunus persica HOM05D007468 ORTHO05D009051 2.8e-11 73.2 171 35.7
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 2.8e-11 73.2 173 38.7
Cpa.g.sc18.3 Carica papaya HOM05D007468 ORTHO05D009051 3.6e-11 72.8 178 36.0
Potri.014G123500 Populus trichocarpa HOM05D007468 ORTHO05D009051 1.0e-10 71.2 189 33.3
Manes.01G225500 Manihot esculenta HOM05D007468 ORTHO05D009051 1.4e-10 70.9 159 38.4
Eucgr.H01069 Eucalyptus grandis HOM05D007468 ORTHO05D009051 1.8e-10 70.5 161 32.9
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 1.8e-10 70.5 147 40.8
DCAR_002873 Daucus carota HOM05D007468 ORTHO05D009051 3.0e-10 69.7 227 29.5
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 3.0e-10 69.7 239 32.2
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 8.9e-10 68.2 147 39.5
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 1.2e-09 67.8 205 33.7
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 2.6e-09 66.6 193 32.1
PSO357G0021 Papaver somniferum HOM05D007468 ORTHO05D009051 4.4e-09 65.9 191 34.6
BcaB03g15797 Brassica carinata HOM05D010095 ORTHO05D012148 1.3e-08 64.3 198 28.8
Rhsim13G0006300 Rhododendron simsii HOM05D007468 ORTHO05D009051 1.3e-08 64.3 235 29.4
Ciclev10024491m.g Citrus clementina HOM05D007468 ORTHO05D009051 1.7e-08 63.9 179 34.6
Peaxi162Scf00140g01310 Petunia axillaris HOM05D007468 ORTHO05D009051 1.7e-08 63.9 171 32.7
Gohir.D12G130200 Gossypium hirsutum HOM05D041120 ORTHO05D009051 3.7e-08 62.8 182 37.4
Actinidia27604 Actinidia chinensis HOM05D007468 ORTHO05D009051 4.9e-08 62.4 148 34.5
PSO170G3554 Papaver somniferum HOM05D007468 ORTHO05D009051 4.9e-08 62.4 169 36.7
Sabra14G0091900 Salix brachista HOM05D007468 ORTHO05D009051 4.9e-08 62.4 196 31.6
Nitab4.5_0008750g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 6.4e-08 62.0 210 30.5
CAN.G1209.19 Capsicum annuum HOM05D007468 ORTHO05D009051 8.3e-08 61.6 178 33.7
CiPaw.08G091800 Carya illinoinensis HOM05D007468 ORTHO05D009051 8.3e-08 61.6 210 31.4
CDE08G0146 Ceratophyllum demersum HOM05D007468 ORTHO05D009051 8.3e-08 61.6 178 30.9
Thhalv10009861m.g Eutrema salsugineum HOM05D010095 ORTHO05D012148 1.1e-07 61.2 172 30.2
Gorai.008G141500 Gossypium raimondii HOM05D041120 ORTHO05D009051 1.1e-07 61.2 185 36.2
Sopen06g035970 Solanum pennellii HOM05D007468 ORTHO05D009051 1.4e-07 60.8 166 32.5
AT5G61710 Arabidopsis thaliana HOM05D010095 ORTHO05D012148 1.8e-07 60.5 164 27.4
Nitab4.5_0002828g0030 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.8e-07 60.5 223 29.1
MBI18_g24947_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 3.2e-07 59.7 161 30.4
Gohir.A12G126800 Gossypium hirsutum HOM05D041120 ORTHO05D009051 1.2e-06 57.8 182 34.6
SGA_v2.0_scaffold334G49050 Striga asiatica HOM05D007468 ORTHO05D009051 1.2e-06 57.8 192 31.8
ATR0730G063 Amborella trichopoda HOM05D045150 ORTHO05D009051 2.0e-06 57.0 169 35.5
DCAR_005774 Daucus carota HOM05D007468 ORTHO05D009051 2.7e-06 56.6 177 32.2
ATR0706G066 Amborella trichopoda HOM05D045150 ORTHO05D009051 4.6e-06 55.8 172 32.6
C05p01370 Brassica napus HOM05D010095 ORTHO05D012148 5.9e-06 55.5 193 29.0
BolC5t28919H Brassica oleracea HOM05D010095 ORTHO05D012148 5.9e-06 55.5 194 28.9
AT4G02160 Arabidopsis thaliana HOM05D010095 ORTHO05D012148 7.8e-06 55.1 172 33.1


User provided reference genes

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