Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G010700 Glycine max HOM05D012173 ORTHO05D004310 2.3e-102 375.9 241 100.0
Glyma.10G011100 Glycine max HOM05D012173 ORTHO05D004310 2.0e-74 283.1 242 81.8
VMungo0720G2010 Vigna mungo HOM05D012173 ORTHO05D004310 2.3e-62 243.0 237 66.7
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 3.3e-53 212.6 242 55.4
Phvul.007G212700 Phaseolus vulgaris HOM05D012173 ORTHO05D004310 9.6e-53 211.1 242 67.4
Lj5g0021212 Lotus japonicus HOM05D012173 ORTHO05D004310 2.9e-49 199.5 231 70.1
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 2.5e-48 196.4 241 60.2
Psat6g160360 Pisum sativum HOM05D012173 ORTHO05D004310 2.1e-44 183.3 239 51.9
Ca_10269_v3 Cicer arietinum L. HOM05D012173 ORTHO05D004310 1.8e-43 180.3 247 64.4
Lalb_Chr02g0146911 Lupinus albus HOM05D012173 ORTHO05D004310 5.0e-41 172.2 234 56.8
TPR.G31752 Trifolium pratense HOM05D012173 ORTHO05D004310 1.6e-39 167.2 239 60.7
arahy.Tifrunner.gnm1.ann1.DQ3PTC Arachis hypogaea HOM05D012173 ORTHO05D004310 4.2e-24 115.9 230 47.0
arahy.Tifrunner.gnm1.ann1.WF3AWK Arachis hypogaea HOM05D012173 ORTHO05D004310 5.5e-24 115.5 228 49.1
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 2.4e-19 100.1 239 37.7
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 5.3e-19 99.0 245 37.6
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 7.0e-19 98.6 229 48.9
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.4e-13 79.3 233 45.1
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 5.7e-13 79.0 236 44.9
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 7.5e-13 78.6 237 37.1
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.3e-12 77.8 220 47.3
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 1.7e-12 77.4 232 45.3
Cpa.g.sc18.87 Carica papaya HOM05D009814 ORTHO05D004310 2.2e-12 77.0 231 45.5
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 2.2e-12 77.0 230 45.7
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.8e-12 75.9 236 43.2
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 4.1e-11 72.8 220 48.2
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 7.0e-11 72.0 220 46.8
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 7.0e-11 72.0 220 34.5
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 1.6e-10 70.9 229 31.9
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 4.5e-10 69.3 235 40.4
Sed0019931 Sechium edule HOM05D009154 ORTHO05D004310 7.7e-10 68.6 212 31.6
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 1.7e-09 67.4 232 29.7
Gohir.A11G108100 Gossypium hirsutum HOM05D009814 ORTHO05D004310 2.2e-09 67.0 230 46.1
TWI18G0583 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 2.2e-09 67.0 243 39.1
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 3.8e-09 66.2 223 28.3
Sed0022617 Sechium edule HOM05D009154 ORTHO05D004310 3.8e-09 66.2 228 33.3
CsaV3_7G030120 Cucumis sativus L. HOM05D009154 ORTHO05D004310 5.0e-09 65.9 226 40.7
arahy.Tifrunner.gnm1.ann1.RVTS57 Arachis hypogaea HOM05D012173 ORTHO05D004310 8.5e-09 65.1 60 56.7
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 1.1e-08 64.7 239 41.8
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 1.5e-08 64.3 226 32.3
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.9e-08 63.9 234 29.1
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 2.5e-08 63.5 87 41.4
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 5.5e-08 62.4 248 29.8
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 1.2e-07 61.2 81 43.2
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 4.7e-07 59.3 240 27.1
TWI36G1520 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 4.7e-07 59.3 229 41.5
Eucgr.K03556 Eucalyptus grandis HOM05D009154 ORTHO05D004310 2.3e-06 57.0 227 35.2
PGR044G0657 Punica granatum HOM05D009154 ORTHO05D004310 2.3e-06 57.0 217 31.8
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 4.0e-06 56.2 235 42.6
AUR62024610 Chenopodium quinoa HOM05D009154 ORTHO05D004310 5.2e-06 55.8 253 30.0
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 8.8e-06 55.1 235 40.9
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 8.8e-06 55.1 236 35.2


User provided reference genes

Program Settings