Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G007232 Glycine max HOM05D006046 ORTHO05D007580 9.1e-78 293.5 149 100.0
Glyma.10G138600 Glycine max HOM05D006046 ORTHO05D007580 9.8e-64 246.9 236 61.0
Phvul.007G208700 Phaseolus vulgaris HOM05D006046 ORTHO05D007580 3.8e-60 235.0 236 58.1
VMungo0720G0414 Vigna mungo HOM05D006046 ORTHO05D007580 9.5e-59 230.3 236 57.2
Lalb_Chr21g0309871 Lupinus albus HOM05D006046 ORTHO05D007580 5.7e-56 221.1 236 55.5
Psat6g158600 Pisum sativum HOM05D006046 ORTHO05D007580 5.7e-56 221.1 236 55.5
Medtr1g085730 Medicago truncatula HOM05D006046 ORTHO05D007580 9.8e-56 220.3 236 54.7
Lalb_Chr02g0147181 Lupinus albus HOM05D006046 ORTHO05D007580 6.4e-55 217.6 236 54.7
arahy.Tifrunner.gnm1.ann1.01TYUM Arachis hypogaea HOM05D006046 ORTHO05D007580 2.4e-54 215.7 236 53.0
arahy.Tifrunner.gnm1.ann1.11DDVR Arachis hypogaea HOM05D006046 ORTHO05D007580 2.4e-54 215.7 236 53.0
Lj5g0023586 Lotus japonicus HOM05D006046 ORTHO05D007580 5.4e-54 214.5 236 53.8
Ca_10238_v3 Cicer arietinum L. HOM05D006046 ORTHO05D007580 9.2e-54 213.8 236 53.4
TPR.G3061 Trifolium pratense HOM05D006046 ORTHO05D007580 9.2e-54 213.8 236 53.0
Ciclev10019590m.g Citrus clementina HOM05D006046 ORTHO05D007580 1.1e-49 200.3 236 48.7
CiPaw.07G126200 Carya illinoinensis HOM05D006046 ORTHO05D007580 3.1e-49 198.7 236 49.6
QL12p035018 Quercus lobata HOM05D006046 ORTHO05D007580 3.1e-49 198.7 236 47.9
GSVIVG01028241001 Vitis vinifera HOM05D006046 ORTHO05D007580 6.8e-49 197.6 236 49.2
Actinidia21336 Actinidia chinensis HOM05D006046 ORTHO05D007580 1.2e-48 196.8 236 49.6
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 1.5e-48 196.4 236 48.7
Nn4g25300 Nelumbo nucifera HOM05D006046 ORTHO05D007580 2.6e-48 195.7 236 48.3
Cpa.g.sc57.26 Carica papaya HOM05D006046 ORTHO05D007580 3.4e-48 195.3 236 48.3
Hma1.2p1_0408F.1_g146260 Hydrangea macrophylla HOM05D006046 ORTHO05D007580 3.4e-48 195.3 236 48.3
Sed0026667 Sechium edule HOM05D006046 ORTHO05D007580 4.4e-48 194.9 236 48.7
CANSAT25G3010 Cannabis sativa HOM05D006046 ORTHO05D007580 9.8e-48 193.7 236 47.9
A10p01090 Brassica napus HOM05D006046 ORTHO05D007580 1.3e-47 193.4 236 47.5
TAR633G1601 Trochodendron aralioides HOM05D006046 ORTHO05D007580 1.3e-47 193.4 236 47.9
BraA10t42387Z Brassica rapa HOM05D006046 ORTHO05D007580 2.9e-47 192.2 236 47.0
CARHR249980 Cardamine hirsuta HOM05D006046 ORTHO05D007580 4.9e-47 191.4 236 47.0
Thecc.01G326200 Theobroma cacao HOM05D006046 ORTHO05D007580 4.9e-47 191.4 236 47.0
C05p01130 Brassica napus HOM05D006046 ORTHO05D007580 6.4e-47 191.0 236 47.0
TAR362G0326 Trochodendron aralioides HOM05D006046 ORTHO05D007580 6.4e-47 191.0 236 47.5
AL6G51640 Arabidopsis lyrata HOM05D006046 ORTHO05D007580 8.3e-47 190.7 236 46.6
ClCG01G007200 Citrullus lanatus HOM05D006046 ORTHO05D007580 8.3e-47 190.7 236 47.5
CsaV3_5G018640 Cucumis sativus L. HOM05D006046 ORTHO05D007580 8.3e-47 190.7 236 46.6
BolC5t28894H Brassica oleracea HOM05D006046 ORTHO05D007580 1.1e-46 190.3 236 47.0
Nitab4.5_0003092g0030 Nicotiana tabacum HOM05D006046 ORTHO05D007580 1.4e-46 189.9 236 47.0
Peaxi162Scf00309g00623 Petunia axillaris HOM05D006046 ORTHO05D007580 1.4e-46 189.9 237 46.8
Potri.002G186300 Populus trichocarpa HOM05D006046 ORTHO05D007580 1.4e-46 189.9 236 47.5
Carub.0006s3551 Capsella rubella HOM05D006046 ORTHO05D007580 1.9e-46 189.5 236 45.8
PGR142G1127 Punica granatum HOM05D006046 ORTHO05D007580 1.9e-46 189.5 236 46.6
Sp6g01580 Schrenkiella parvula HOM05D006046 ORTHO05D007580 1.9e-46 189.5 236 46.2
Solyc01g079090.4 Solanum lycopersicum HOM05D006046 ORTHO05D007580 1.9e-46 189.5 236 47.0
COL.COLO4_23120 Corchorus olitorius HOM05D006046 ORTHO05D007580 2.4e-46 189.1 236 46.2
MELO3C005189.2 Cucumis melo HOM05D006046 ORTHO05D007580 3.2e-46 188.7 236 46.6
Potri.014G111600 Populus trichocarpa HOM05D006046 ORTHO05D007580 3.2e-46 188.7 236 47.0
TWI59G0782 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 3.2e-46 188.7 236 44.9
AT4G01690 Arabidopsis thaliana HOM05D006046 ORTHO05D007580 5.4e-46 188.0 236 45.8
DCAR_002940 Daucus carota HOM05D006046 ORTHO05D007580 5.4e-46 188.0 236 45.8
Gohir.A11G105300 Gossypium hirsutum HOM05D006046 ORTHO05D007580 5.4e-46 188.0 236 46.6
Sabra02G0148100 Salix brachista HOM05D006046 ORTHO05D007580 5.4e-46 188.0 236 47.0
Sabra02G0148500 Salix brachista HOM05D006046 ORTHO05D007580 5.4e-46 188.0 236 47.0
Sopen01g030600 Solanum pennellii HOM05D006046 ORTHO05D007580 5.4e-46 188.0 236 46.6
Aa31LG5G1400 Aethionema arabicum HOM05D006046 ORTHO05D007580 7.0e-46 187.6 236 46.6
Duzib133G1070 Durio zibethinus HOM05D006046 ORTHO05D007580 7.0e-46 187.6 236 46.6
THA.LOC104825927 Tarenaya hassleriana HOM05D006046 ORTHO05D007580 7.0e-46 187.6 236 46.2
Gohir.D11G110200 Gossypium hirsutum HOM05D006046 ORTHO05D007580 9.2e-46 187.2 236 46.6
Os01g0286600 Oryza sativa ssp. japonica HOM05D006046 ORTHO05D007580 9.2e-46 187.2 236 47.0
Atru.chr5.852 Acer truncatum HOM05D006046 ORTHO05D007580 1.2e-45 186.8 236 46.2
CSS0022330 Camellia sinensis var. sinensis HOM05D006046 ORTHO05D007580 1.2e-45 186.8 236 46.2
RcHm_v2.0_Chr3g0485661 Rosa chinensis HOM05D006046 ORTHO05D007580 1.2e-45 186.8 236 46.6
Migut.D00009 Erythranthe guttata HOM05D006046 ORTHO05D007580 1.6e-45 186.4 235 45.5
Rhsim01G0000700 Rhododendron simsii HOM05D006046 ORTHO05D007580 1.6e-45 186.4 236 46.6
ATR0796G090 Amborella trichopoda HOM05D006046 ORTHO05D007580 2.0e-45 186.0 236 44.5
Sed0002893 Sechium edule HOM05D006046 ORTHO05D007580 2.0e-45 186.0 235 46.4
Duzib138G1207 Durio zibethinus HOM05D006046 ORTHO05D007580 2.7e-45 185.7 236 46.6
MD09G1291200 Malus domestica HOM05D006046 ORTHO05D007580 2.7e-45 185.7 236 46.6
FAN26G1773 Fragaria x ananassa HOM05D006046 ORTHO05D007580 3.5e-45 185.3 236 45.8
FAN28G0956 Fragaria x ananassa HOM05D006046 ORTHO05D007580 3.5e-45 185.3 236 45.8
CDE11G0173 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 4.6e-45 184.9 236 46.2
Gorai.007G117800 Gossypium raimondii HOM05D006046 ORTHO05D007580 4.6e-45 184.9 236 46.2
Eucgr.K00558 Eucalyptus grandis HOM05D006046 ORTHO05D007580 7.8e-45 184.1 236 46.6
FAN23G1049 Fragaria x ananassa HOM05D006046 ORTHO05D007580 7.8e-45 184.1 236 45.3
BcaC05g24615 Brassica carinata HOM05D006046 ORTHO05D007580 1.0e-44 183.7 219 48.9
PGSC0003DMG400001117 Solanum tuberosum HOM05D006046 ORTHO05D007580 1.0e-44 183.7 236 45.8
FvH4_1g26170 Fragaria vesca HOM05D006046 ORTHO05D007580 1.3e-44 183.3 236 45.3
FAN19G1511 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.3e-44 183.3 236 45.3
Oeu052589.3 Olea europaea HOM05D006046 ORTHO05D007580 1.3e-44 183.3 236 44.5
Cc01_g21760 Coffea canephora HOM05D006046 ORTHO05D007580 2.3e-44 182.6 236 45.8
Thhalv10028544m.g Eutrema salsugineum HOM05D006046 ORTHO05D007580 2.3e-44 182.6 236 44.5
SGA_v2.0_scaffold572G52966 Striga asiatica HOM05D006046 ORTHO05D007580 8.6e-44 180.6 236 44.9
Zm00001eb332380 Zea mays HOM05D006046 ORTHO05D007580 1.5e-43 179.9 236 45.3
MSTRG.18059 Avicennia marina HOM05D006046 ORTHO05D007580 1.9e-43 179.5 236 44.5
Prupe.3G001700 Prunus persica HOM05D006046 ORTHO05D007580 3.3e-43 178.7 236 44.5
Ah.12g061390 Amaranthus hybridus HOM05D006046 ORTHO05D007580 5.6e-43 177.9 230 45.2
Aqoxy5G02854 Aquilegia oxysepala HOM05D006046 ORTHO05D007580 2.1e-42 176.0 236 43.6
Lsat_1_v5_gn_9_7041 Lactuca sativa HOM05D006046 ORTHO05D007580 1.8e-41 172.9 236 43.6
vmacro02355 Vaccinium macrocarpon HOM05D006046 ORTHO05D007580 3.1e-41 172.2 265 41.5
HanXRQChr10g0286481 Helianthus annuus HOM05D006046 ORTHO05D007580 6.8e-41 171.0 236 43.6
PSO210G0070 Papaver somniferum HOM05D006046 ORTHO05D007580 1.5e-40 169.9 236 43.2
PSO761G0347 Papaver somniferum HOM05D006046 ORTHO05D007580 1.5e-40 169.9 236 43.6
AUR62040510 Chenopodium quinoa HOM05D006046 ORTHO05D007580 3.4e-40 168.7 242 42.1
HPP92_010589 Vanilla planifolia HOM05D006046 ORTHO05D007580 3.4e-40 168.7 236 43.6
SEGI_28664 Sequoiadendron giganteum HOM05D006046 ORTHO05D007580 8.3e-39 164.1 235 41.3
ECA247G1361 Erigeron canadensis HOM05D006046 ORTHO05D007580 1.9e-38 162.9 236 41.1
Pp3c1_34400 Physcomitrium patens HOM05D006046 ORTHO05D007580 1.6e-34 149.8 235 38.7
SMO356G0553 Selaginella moellendorffii HOM05D006046 ORTHO05D007580 1.8e-33 146.4 247 35.6
EL10Ac2g02399 Beta vulgaris HOM05D006046 ORTHO05D007580 2.4e-33 146.0 314 33.8
AagrBONN_evm.TU.Sc2ySwM_368.2775 Anthoceros agrestis HOM05D006046 ORTHO05D007580 8.9e-33 144.1 235 37.9
arahy.Tifrunner.gnm1.ann1.45WRUP Arachis hypogaea HOM05D006046 ORTHO05D007580 7.6e-32 141.0 218 41.7
CDE05G0285 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 2.2e-31 139.4 81 80.2
Mapoly0001s0469 Marchantia polymorpha HOM05D006046 ORTHO05D007580 9.2e-30 134.0 235 34.9
AUR62042114 Chenopodium quinoa HOM05D006046 ORTHO05D007580 1.2e-29 133.7 84 73.8
Lj1C7T2 Lonicera japonica HOM05D006046 ORTHO05D007580 1.2e-29 133.7 278 34.2
TWI23G1081 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 8.7e-28 127.5 82 70.7
arahy.Tifrunner.gnm1.ann1.R45IF4 Arachis hypogaea HOM05D006046 ORTHO05D007580 5.6e-27 124.8 81 71.6
Cre09.g396300 Chlamydomonas reinhardtii HOM05D006046 ORTHO05D007580 1.1e-25 120.6 235 34.0
arahy.Tifrunner.gnm1.ann1.X26H0K Arachis hypogaea HOM05D006046 ORTHO05D007580 1.4e-25 120.2 83 68.7
arahy.Tifrunner.gnm1.ann1.W5PTGQ Arachis hypogaea HOM05D006046 ORTHO05D007580 4.4e-24 115.2 71 71.8
Haze_05155 Corylus avellana HOM05D006046 ORTHO05D007580 5.4e-22 108.2 71 77.5
Sabra14G0082000 Salix brachista HOM05D006046 ORTHO05D007580 7.1e-22 107.8 132 50.0
MCO14G379 Micromonas commoda HOM05D006046 ORTHO05D007580 2.7e-21 105.9 238 29.4
Dinv33175 Davidia involucrata HOM05D006046 ORTHO05D007580 3.5e-21 105.5 66 78.8
CAN.G179.31 Capsicum annuum HOM05D006046 ORTHO05D007580 1.7e-20 103.2 69 75.4
Manes.05G008200 Manihot esculenta HOM05D006046 ORTHO05D007580 1.7e-20 103.2 66 75.8
CBR_g88559 Chara braunii HOM05D000019 ORTHO05D000353 3.0e-20 102.4 81 59.3
Hma1.2p1_0408F.1_g146250 Hydrangea macrophylla HOM05D006046 ORTHO05D007580 3.9e-20 102.1 66 75.8
Hund03590 Selenicereus undatus HOM05D006046 ORTHO05D007580 7.3e-19 97.8 164 40.9
AUR62042113 Chenopodium quinoa HOM05D006046 ORTHO05D007580 1.4e-17 93.6 66 68.2
ECA247G1196 Erigeron canadensis HOM05D006046 ORTHO05D007580 4.0e-17 92.0 94 50.0
PRCOL_00002487 Prasinoderma coloniale HOM05D006046 ORTHO05D007580 4.0e-17 92.0 244 28.7
CBR_g88557 Chara braunii HOM05D006046 ORTHO05D007580 7.4e-11 71.2 77 49.4
AUR62044205 Chenopodium quinoa HOM05D006046 ORTHO05D007580 2.8e-10 69.3 54 59.3
Sp1g01440 Schrenkiella parvula HOM05D006046 ORTHO05D007580 9.3e-06 54.3 30 86.7


User provided reference genes

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