Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 0.0e+00 2263.0 1335 100.0
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 0.0e+00 1123.2 1356 56.8
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 7.3e-235 818.5 1352 49.6
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 7.5e-131 473.0 1356 37.2
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 8.3e-122 443.0 1412 37.4
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 6.6e-119 433.3 1348 32.6
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 6.6e-103 380.2 1396 31.9
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 1.7e-50 206.1 803 29.8
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 8.5e-50 203.8 908 28.5
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.4e-44 186.4 832 28.1
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 3.1e-44 185.3 740 30.0
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 3.5e-43 181.8 389 37.0
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 2.5e-41 175.6 175 62.3
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 2.9e-34 152.1 573 30.5
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 5.0e-34 151.4 838 27.7
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 5.0e-34 151.4 721 28.3
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 2.5e-33 149.1 818 27.8
Ca_05179_v3 Cicer arietinum L. HOM05D008144 ORTHO05D010081 1.4e-31 143.3 419 42.0
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 1.4e-31 143.3 1128 24.6
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 8.8e-31 140.6 940 25.6
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 1.1e-28 133.7 1123 25.5
VMungo0251G0623 Vigna mungo HOM05D008144 ORTHO05D051601 4.5e-27 128.3 310 33.5
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 5.0e-26 124.8 222 38.3
VMungo1127G1909 Vigna mungo HOM05D008144 ORTHO05D010310 2.5e-25 122.5 152 53.9
VMungo0251G1547 Vigna mungo HOM05D008144 ORTHO05D051601 2.8e-24 119.0 160 45.6
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 8.0e-24 117.5 776 25.0
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 4.0e-23 115.2 240 36.7
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 6.8e-23 114.4 177 44.6
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 3.4e-22 112.1 729 26.1
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 7.5e-22 110.9 378 29.9
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 1.3e-21 110.2 804 25.1
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 2.2e-21 109.4 995 24.0
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 4.9e-21 108.2 945 24.2
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.9e-21 108.2 951 23.9
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.9e-21 108.2 951 23.9
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 6.4e-21 107.8 560 25.5
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 5.4e-20 104.8 495 26.9
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 5.4e-20 104.8 818 23.2
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.6e-19 103.2 1096 24.4
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 7.8e-19 100.9 956 24.1
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 1.3e-18 100.1 455 27.3
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 3.3e-17 95.5 138 38.4
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 3.4e-14 85.5 173 39.9
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 2.9e-13 82.4 196 35.2
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 1.1e-12 80.5 185 34.1
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 1.9e-12 79.7 188 33.5
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 1.9e-12 79.7 167 33.5
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 1.9e-12 79.7 214 29.9
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 5.4e-12 78.2 211 32.2
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 3.5e-11 75.5 1038 23.4
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 3.5e-11 75.5 167 36.5
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 3.5e-11 75.5 146 38.4
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 4.6e-11 75.1 167 38.3
arahy.Tifrunner.gnm1.ann1.PTW3I8 Arachis hypogaea HOM05D048597 ORTHO05D038870 7.8e-11 74.3 325 28.9
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 5.0e-10 71.6 138 31.2
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.1e-09 70.5 1076 23.0
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.5e-09 70.1 225 31.1
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 1.5e-09 70.1 336 24.7
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 2.5e-09 69.3 382 25.9
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 1.6e-08 66.6 681 21.7
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 2.8e-08 65.9 132 32.6
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 6.2e-08 64.7 296 26.0
arahy.Tifrunner.gnm1.ann1.9W8MHJ Arachis hypogaea HOM05D048597 ORTHO05D038870 1.4e-07 63.5 893 23.4
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 1.8e-07 63.2 347 25.6
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 2.3e-07 62.8 139 30.9
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 8.9e-07 60.8 220 32.7
Sabra10G0062200 Salix brachista HOM05D008144 ORTHO05D010081 1.5e-06 60.1 149 31.5
PSO210G7038 Papaver somniferum HOM05D042988 ORTHO05D031257 9.9e-06 57.4 403 22.8


User provided reference genes

Program Settings