Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 1.3e-35 152.5 77 100.0
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 7.9e-33 143.3 75 93.3
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 2.3e-32 141.7 74 93.2
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 1.8e-29 132.1 75 85.3
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 1.8e-29 132.1 74 85.1
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.2e-28 129.4 75 81.3
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 1.2e-28 129.4 75 81.3
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 3.4e-28 127.9 75 78.7
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 3.4e-28 127.9 75 78.7
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 3.4e-28 127.9 75 78.7
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 4.5e-28 127.5 75 80.0
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 4.5e-28 127.5 74 83.8
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 4.5e-28 127.5 75 80.0
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 1.3e-27 125.9 77 79.2
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 2.2e-27 125.2 77 77.9
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 2.2e-27 125.2 74 79.7
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 2.9e-27 124.8 75 76.0
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 3.8e-27 124.4 74 78.4
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 3.8e-27 124.4 76 75.0
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 3.8e-27 124.4 75 77.3
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 4.9e-27 124.0 74 81.1
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 4.9e-27 124.0 74 77.0
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 4.9e-27 124.0 75 78.7
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 6.5e-27 123.6 74 77.0
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 6.5e-27 123.6 75 74.7
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 6.5e-27 123.6 75 73.3
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 8.4e-27 123.2 75 77.3
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 1.1e-26 122.9 74 78.4
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.4e-26 122.5 75 76.0
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 1.9e-26 122.1 77 75.3
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 1.9e-26 122.1 77 76.6
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 1.9e-26 122.1 74 78.4
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 1.9e-26 122.1 74 79.7
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 2.5e-26 121.7 74 75.7
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 3.2e-26 121.3 76 75.0
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 4.2e-26 120.9 77 75.3
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 5.5e-26 120.6 78 78.2
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 7.1e-26 120.2 73 80.8
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 7.1e-26 120.2 73 80.8
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 7.1e-26 120.2 74 78.4
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 7.1e-26 120.2 74 78.4
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 9.3e-26 119.8 75 73.3
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 1.2e-25 119.4 74 75.7
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 1.6e-25 119.0 74 74.3
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 1.6e-25 119.0 74 77.0
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 1.6e-25 119.0 74 77.0
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 1.6e-25 119.0 74 77.0
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 1.6e-25 119.0 75 73.3
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 2.1e-25 118.6 74 74.3
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 2.1e-25 118.6 75 73.3
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 2.1e-25 118.6 74 77.0
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 2.1e-25 118.6 75 72.0
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 2.7e-25 118.2 75 73.3
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 2.7e-25 118.2 77 75.3
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 4.6e-25 117.5 75 72.0
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 4.6e-25 117.5 74 75.7
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 4.6e-25 117.5 74 75.7
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 4.6e-25 117.5 74 77.0
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 6.0e-25 117.1 77 71.4
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 7.9e-25 116.7 76 76.3
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 7.9e-25 116.7 74 71.6
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 7.9e-25 116.7 76 76.3
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 1.0e-24 116.3 73 71.2
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 1.0e-24 116.3 74 75.7
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 1.3e-24 115.9 76 75.0
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 2.3e-24 115.2 74 71.6
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 3.9e-24 114.4 76 69.7
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 3.9e-24 114.4 75 76.0
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 3.9e-24 114.4 75 70.7
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 5.1e-24 114.0 74 74.3
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 5.1e-24 114.0 74 75.7
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 6.7e-24 113.6 75 76.0
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 6.7e-24 113.6 77 74.0
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 6.7e-24 113.6 73 68.5
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 6.7e-24 113.6 76 75.0
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 6.7e-24 113.6 77 71.4
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 8.7e-24 113.2 78 73.1
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 1.1e-23 112.8 76 71.1
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.5e-23 112.5 75 70.7
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 2.5e-23 111.7 74 74.3
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 2.5e-23 111.7 74 71.6
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 5.7e-23 110.5 73 75.3
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 5.7e-23 110.5 74 73.0
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 7.4e-23 110.2 77 67.5
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 7.4e-23 110.2 77 67.5
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 9.6e-23 109.8 73 72.6
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 9.6e-23 109.8 73 72.6
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 1.6e-22 109.0 76 71.1
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 2.8e-22 108.2 73 72.6
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 2.8e-22 108.2 74 68.9
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 4.8e-22 107.5 73 72.6
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 1.1e-21 106.3 76 73.7
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 1.1e-21 106.3 74 68.9
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.1e-21 106.3 74 68.9
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 1.4e-21 105.9 67 74.6
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 2.4e-21 105.1 73 69.9
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 3.1e-21 104.8 106 53.8
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 6.9e-21 103.6 73 68.5
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 6.9e-21 103.6 75 66.7
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 1.2e-20 102.8 77 67.5
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 1.5e-20 102.4 67 68.7
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 2.6e-20 101.7 74 64.9
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 2.2e-19 98.6 73 64.4
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 8.5e-19 96.7 66 71.2
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 1.4e-18 95.9 72 63.9
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 3.2e-18 94.7 74 59.5
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 2.7e-17 91.7 117 45.3
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 6.7e-16 87.0 68 52.9
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 4.8e-14 80.9 68 48.5
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 4.1e-13 77.8 57 64.9
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 2.9e-11 71.6 49 69.4
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 8.5e-11 70.1 62 50.0
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 1.9e-10 68.9 46 69.6
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 5.5e-10 67.4 42 78.6
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 7.2e-10 67.0 43 72.1
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 3.6e-09 64.7 43 69.8
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 1.8e-08 62.4 63 46.0
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 1.8e-08 62.4 41 73.2
FvH4_4g02000 Fragaria vesca HOM05D006636 ORTHO05D008266 5.1e-08 60.8 33 78.8
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 7.4e-07 57.0 41 63.4


User provided reference genes

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