Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 5.7e-175 617.5 306 100.0
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 5.5e-130 468.0 321 76.6
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 1.6e-124 449.9 321 73.2
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 1.6e-121 439.9 321 71.7
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 6.4e-110 401.4 325 66.5
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 6.0e-108 394.8 324 65.1
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 6.0e-108 394.8 321 65.7
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 1.3e-107 393.7 325 65.5
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 6.6e-107 391.3 325 65.2
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 6.6e-107 391.3 321 64.8
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 1.5e-106 390.2 322 62.7
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 2.5e-106 389.4 322 62.7
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 7.3e-106 387.9 323 64.1
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 4.0e-104 382.1 325 61.5
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 2.6e-103 379.4 325 60.9
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 3.4e-103 379.0 323 61.3
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 2.9e-102 375.9 327 60.9
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 2.9e-102 375.9 326 61.0
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 3.7e-102 375.6 324 61.1
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 7.1e-101 371.3 325 61.2
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 1.6e-100 370.2 325 60.9
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 2.7e-100 369.4 325 60.0
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 1.0e-99 367.5 321 61.7
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 2.3e-99 366.3 322 59.6
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 3.0e-99 365.9 325 58.8
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 3.9e-99 365.5 322 60.6
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 1.1e-98 364.0 319 61.1
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 1.5e-98 363.6 325 57.8
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 2.5e-98 362.8 324 59.6
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 4.3e-98 362.1 324 58.6
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 7.3e-98 361.3 324 60.2
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 7.3e-98 361.3 324 60.2
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 9.5e-98 360.9 320 60.3
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 3.6e-97 359.0 323 58.5
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 3.6e-97 359.0 324 59.6
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 2.4e-96 356.3 320 58.1
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 4.0e-96 355.5 324 59.3
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 4.0e-96 355.5 325 57.8
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 4.0e-96 355.5 325 57.8
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 5.2e-96 355.1 325 57.2
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 1.5e-95 353.6 324 58.3
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 2.0e-95 353.2 320 59.1
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 3.4e-95 352.4 321 58.3
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 3.4e-95 352.4 321 58.9
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 4.4e-95 352.1 323 57.3
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 4.4e-95 352.1 324 58.0
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 5.8e-95 351.7 320 58.1
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 5.8e-95 351.7 327 55.7
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 7.6e-95 351.3 321 57.9
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 7.6e-95 351.3 321 57.9
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 1.7e-94 350.1 324 57.1
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 2.9e-94 349.4 322 56.5
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 2.9e-94 349.4 321 58.6
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 2.9e-94 349.4 324 57.1
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 2.9e-94 349.4 322 57.8
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 2.9e-94 349.4 325 57.5
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 2.9e-94 349.4 342 55.3
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 6.4e-94 348.2 325 56.9
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 1.1e-93 347.4 325 55.7
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 1.4e-93 347.1 325 55.7
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 1.9e-93 346.7 325 56.3
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 5.4e-93 345.1 244 70.1
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 1.2e-92 344.0 341 55.1
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 2.7e-92 342.8 325 56.0
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 4.6e-92 342.0 325 55.7
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 8.7e-91 337.8 244 68.9
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 1.1e-90 337.4 325 54.2
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 4.3e-90 335.5 236 70.8
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 9.6e-90 334.3 322 54.3
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 2.8e-89 332.8 322 53.7
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 4.7e-89 332.0 244 68.0
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 1.4e-88 330.5 239 70.3
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 1.2e-87 327.4 327 54.7
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 7.6e-87 324.7 321 55.1
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 3.8e-86 322.4 316 54.1
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 6.4e-86 321.6 329 53.8
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 2.4e-85 319.7 298 57.7
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 2.1e-84 316.6 327 53.8
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 3.5e-84 315.8 242 64.5
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 6.0e-84 315.1 325 52.9
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 1.7e-83 313.5 325 54.2
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 1.7e-83 313.5 300 55.7
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 3.0e-83 312.8 331 53.5
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 1.1e-80 304.3 241 65.6
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 1.2e-79 300.8 276 58.0
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 2.0e-79 300.1 339 50.4
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 2.7e-76 289.7 268 57.1
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 7.9e-76 288.1 270 56.3
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 1.8e-75 287.0 266 59.0
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 3.9e-75 285.8 269 56.5
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 2.5e-74 283.1 267 57.3
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 1.9e-66 256.9 189 67.7
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 5.7e-66 255.4 351 43.0
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 4.8e-65 252.3 338 44.1
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 3.1e-64 249.6 253 53.4
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 2.0e-63 246.9 267 50.9
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 1.0e-59 234.6 268 50.4
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 6.7e-51 205.3 224 49.6
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 6.7e-43 178.7 107 83.2
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 9.1e-40 168.3 125 65.6
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 1.8e-35 154.1 273 36.6
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 1.8e-27 127.5 236 37.7
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 7.5e-26 122.1 72 84.7
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 2.8e-25 120.2 77 77.9
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 3.0e-19 100.1 55 89.1
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 1.8e-16 90.9 55 81.8
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 1.6e-15 87.8 73 58.9
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 7.0e-08 62.4 223 26.5
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 2.0e-07 60.8 73 41.1
Cre03.g204300 Chlamydomonas reinhardtii HOM05D053947 ORTHO05D044209 5.0e-06 56.2 244 27.5


User provided reference genes

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