Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 9.4e-87 323.6 171 100.0
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 1.1e-61 240.4 243 63.8
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 4.9e-59 231.5 243 60.1
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.9e-58 229.6 243 59.7
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 4.4e-52 208.4 243 56.0
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 2.9e-51 205.7 243 56.4
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 1.0e-48 197.2 243 51.4
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 1.3e-48 196.8 252 53.2
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 4.3e-47 191.8 157 70.7
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 3.6e-46 188.7 245 53.1
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 6.2e-46 188.0 245 52.2
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 6.2e-46 188.0 245 52.2
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 2.4e-45 186.0 157 68.8
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 4.0e-45 185.3 157 67.5
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 6.8e-45 184.5 240 50.4
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 6.8e-45 184.5 157 68.2
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 8.9e-45 184.1 241 51.9
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.5e-44 183.3 157 65.6
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 2.0e-44 183.0 238 49.6
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 2.6e-44 182.6 156 65.4
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.4e-44 182.2 157 67.5
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 4.4e-44 181.8 157 66.2
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 4.4e-44 181.8 157 66.2
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 5.8e-44 181.4 157 65.0
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.7e-43 179.9 157 66.2
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.2e-43 179.5 157 65.6
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 2.9e-43 179.1 157 66.2
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 3.8e-43 178.7 157 65.6
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 3.8e-43 178.7 157 68.2
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 4.9e-43 178.3 157 66.9
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 4.9e-43 178.3 157 64.3
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 6.4e-43 177.9 157 65.6
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 6.4e-43 177.9 240 48.8
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.4e-42 176.8 157 65.0
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 1.4e-42 176.8 157 66.9
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 1.9e-42 176.4 247 48.6
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 3.2e-42 175.6 157 63.1
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 4.2e-42 175.3 240 49.2
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.2e-41 173.7 240 48.8
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.2e-41 173.7 240 48.8
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.6e-41 173.3 157 64.3
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 1.6e-41 173.3 157 63.1
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 2.1e-41 172.9 157 62.4
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 2.1e-41 172.9 238 48.3
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 2.1e-41 172.9 157 65.6
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 2.7e-41 172.6 157 63.7
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.7e-41 172.6 157 63.7
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 3.5e-41 172.2 157 63.1
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 6.0e-41 171.4 157 63.1
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 1.0e-40 170.6 157 64.3
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 1.3e-40 170.2 157 61.1
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 1.3e-40 170.2 169 58.6
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 1.3e-40 170.2 169 58.6
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.3e-40 170.2 157 63.7
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.3e-40 170.2 157 62.4
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 2.3e-40 169.5 151 66.9
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 2.3e-40 169.5 157 60.5
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 2.3e-40 169.5 157 61.8
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 2.3e-40 169.5 157 61.8
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.3e-40 169.5 157 61.8
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 2.3e-40 169.5 157 61.8
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.3e-40 169.5 157 63.1
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 3.9e-40 168.7 157 61.1
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 5.1e-40 168.3 157 61.1
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 5.1e-40 168.3 166 60.2
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 6.6e-40 167.9 157 61.8
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 6.6e-40 167.9 157 59.9
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 8.7e-40 167.5 157 62.4
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 8.7e-40 167.5 157 62.4
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.5e-39 166.8 156 61.5
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.9e-39 166.4 157 61.1
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.9e-39 166.4 157 62.4
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.5e-39 166.0 155 61.3
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 3.3e-39 165.6 157 60.5
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 5.6e-39 164.9 157 61.1
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.3e-38 163.7 157 58.6
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 1.6e-38 163.3 157 59.9
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 2.1e-38 162.9 157 59.9
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 2.8e-38 162.5 150 62.0
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 2.4e-37 159.5 157 60.5
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 5.3e-37 158.3 156 59.6
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 9.0e-37 157.5 157 58.6
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 9.0e-37 157.5 157 58.6
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 2.6e-36 156.0 157 58.0
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 2.6e-36 156.0 157 57.3
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 4.9e-35 151.8 193 49.2
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 2.4e-34 149.4 240 44.6
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 3.2e-34 149.1 151 58.9
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 5.4e-34 148.3 140 64.3
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.2e-33 147.1 167 53.3
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 1.6e-33 146.7 156 56.4
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.0e-32 144.1 159 52.8
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.3e-32 143.7 219 45.7
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 6.6e-32 141.4 234 43.6
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 2.1e-30 136.3 159 50.3
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 4.8e-30 135.2 157 50.3
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 1.1e-29 134.0 157 50.3
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 1.9e-26 123.2 133 54.1
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 5.4e-26 121.7 99 70.7
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 9.3e-26 120.9 178 42.7
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 3.9e-24 115.5 155 47.1
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 5.1e-24 115.2 118 55.9
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 3.1e-21 105.9 158 43.0
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 9.3e-18 94.4 67 73.1
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.6e-17 93.6 76 67.1
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.8e-16 90.1 151 39.7
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.2e-12 77.4 65 67.7
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 2.5e-10 69.7 151 32.5
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 3.0e-08 62.8 153 32.7
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 3.7e-06 55.8 45 60.0


User provided reference genes

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