Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G206100 Glycine max HOM05D007047 ORTHO05D009177 6.9e-229 797.0 403 100.0
Phvul.002G000400 Phaseolus vulgaris HOM05D007047 ORTHO05D009177 2.3e-136 489.6 406 68.2
VMungo1215G0554 Vigna mungo HOM05D002164 ORTHO05D002267 1.3e-126 457.2 403 65.5
TPR.G17974 Trifolium pratense HOM05D007047 ORTHO05D009177 1.0e-115 421.0 410 59.5
Ca_24599_v3 Cicer arietinum L. HOM05D007047 ORTHO05D009177 7.3e-114 414.8 408 57.8
Medtr5g013140 Medicago truncatula HOM05D007047 ORTHO05D009177 1.6e-113 413.7 390 59.7
Psat2g177160 Pisum sativum HOM05D007047 ORTHO05D009177 8.4e-102 374.8 388 55.7
Lj2g0019775 Lotus japonicus HOM05D007047 ORTHO05D009177 1.5e-95 354.0 410 53.7
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea HOM05D007047 ORTHO05D009177 1.3e-89 334.3 415 48.0
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea HOM05D007047 ORTHO05D009177 1.3e-89 334.3 415 48.0
Lalb_Chr16g0379431 Lupinus albus HOM05D007047 ORTHO05D009177 3.6e-76 289.7 419 47.3
Psat0s1776g0120 Pisum sativum HOM05D007047 ORTHO05D009177 1.6e-60 237.7 314 49.0
QL12p009685 Quercus lobata HOM05D007047 ORTHO05D009177 1.3e-38 164.9 444 35.4
CANSAT21G2499 Cannabis sativa HOM05D007047 ORTHO05D009177 1.5e-37 161.4 440 33.9
QL12p009257 Quercus lobata HOM05D007047 ORTHO05D009177 1.5e-37 161.4 444 35.4
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 1.2e-36 158.3 463 33.7
CSS0008245 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 1.6e-36 157.9 449 34.3
Medtr5g013080 Medicago truncatula HOM05D007047 ORTHO05D009177 2.8e-36 157.1 274 42.0
Prupe.4G179300 Prunus persica HOM05D007047 ORTHO05D009177 8.0e-36 155.6 427 33.0
COL.COLO4_10022 Corchorus olitorius HOM05D007047 ORTHO05D009177 4.0e-35 153.3 416 33.2
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 3.4e-34 150.2 446 32.5
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 2.9e-33 147.1 456 30.7
CsaV3_3G002430 Cucumis sativus L. HOM05D007047 ORTHO05D009177 3.7e-33 146.7 419 32.9
Potri.003G080700 Populus trichocarpa HOM05D007047 ORTHO05D009177 4.9e-33 146.4 455 33.4
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 3.2e-32 143.7 439 33.9
Sabra03G0052300 Salix brachista HOM05D007047 ORTHO05D009177 2.7e-31 140.6 449 32.3
Duzib205G0846 Durio zibethinus HOM05D007047 ORTHO05D009177 1.0e-30 138.7 453 30.7
Atru.chr9.1243 Acer truncatum HOM05D007047 ORTHO05D009177 1.7e-30 137.9 414 31.4
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 3.3e-29 133.7 428 32.5
Psat2g156960 Pisum sativum HOM05D007047 ORTHO05D009177 3.3e-29 133.7 160 50.0
Haze_07962 Corylus avellana HOM05D007047 ORTHO05D009177 5.6e-29 132.9 444 31.3
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 7.3e-29 132.5 440 33.9
MELO3C013912.2 Cucumis melo HOM05D007047 ORTHO05D009177 7.3e-29 132.5 423 31.9
ClCG10G002400 Citrullus lanatus HOM05D007047 ORTHO05D009177 3.1e-27 127.1 429 30.3
Migut.A01028 Erythranthe guttata HOM05D007047 ORTHO05D009177 4.0e-27 126.7 404 33.2
MD06G1050900 Malus domestica HOM05D007047 ORTHO05D009177 6.8e-27 125.9 436 30.5
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla HOM05D007047 ORTHO05D009177 8.9e-27 125.6 440 29.8
Manes.02G042900 Manihot esculenta HOM05D007047 ORTHO05D009177 2.0e-26 124.4 455 33.0
FAN08G2081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.7e-25 121.3 454 30.0
FvH4_2g33151 Fragaria vesca HOM05D007047 ORTHO05D009177 2.9e-25 120.6 437 30.0
RcHm_v2.0_Chr7g0204751 Rosa chinensis HOM05D007047 ORTHO05D009177 2.9e-25 120.6 442 31.4
TAR375G0331 Trochodendron aralioides HOM05D007047 ORTHO05D009177 6.4e-25 119.4 343 31.8
Rhsim07G0117200 Rhododendron simsii HOM05D007047 ORTHO05D009177 4.1e-24 116.7 415 31.1
PGR031G1177 Punica granatum HOM05D007047 ORTHO05D009177 5.4e-24 116.3 435 28.0
SalBow6G1440 Salvia bowleyana HOM05D007047 ORTHO05D009177 9.2e-24 115.5 427 29.7
FAN24G2075 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.6e-23 114.8 448 29.0
TWI60G0889 Tripterygium wilfordii HOM05D007047 ORTHO05D009177 3.5e-23 113.6 422 31.3
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 4.6e-23 113.2 342 31.9
Ah.10g026860 Amaranthus hybridus HOM05D007047 ORTHO05D009177 7.8e-23 112.5 409 30.3
SGA_v2.0_scaffold104G30204 Striga asiatica HOM05D007047 ORTHO05D009177 7.8e-23 112.5 454 29.5
PGSC0003DMG400024159 Solanum tuberosum HOM05D007047 ORTHO05D009177 2.3e-22 110.9 458 29.3
Hund11335 Selenicereus undatus HOM05D007047 ORTHO05D009177 6.6e-22 109.4 437 28.6
Ciclev10024423m.g Citrus clementina HOM05D007047 ORTHO05D009177 2.5e-21 107.5 442 29.0
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 3.3e-21 107.1 429 27.7
CSS0009500 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 4.3e-21 106.7 397 31.2
FAN04G0327 Fragaria x ananassa HOM05D007047 ORTHO05D009177 9.5e-21 105.5 420 29.3
THA.LOC104807915 Tarenaya hassleriana HOM05D007047 ORTHO05D009177 9.5e-21 105.5 421 29.5
Rhsim07G0117500 Rhododendron simsii HOM05D007047 ORTHO05D009177 1.2e-20 105.1 306 31.4
Psat2g146960 Pisum sativum HOM05D007047 ORTHO05D009177 2.8e-20 104.0 198 38.9
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 3.6e-20 103.6 402 30.1
DCAR_000643 Daucus carota HOM05D007047 ORTHO05D009177 8.1e-20 102.4 363 28.4
AUR62000471 Chenopodium quinoa HOM05D007047 ORTHO05D009177 1.4e-19 101.7 407 28.0
PSO063G2347 Papaver somniferum HOM05D007047 ORTHO05D009177 5.2e-19 99.8 451 29.7
Nn6g33825 Nelumbo nucifera HOM05D007047 ORTHO05D009177 2.6e-18 97.4 343 29.7
AUR62006813 Chenopodium quinoa HOM05D007047 ORTHO05D009177 3.4e-18 97.1 407 28.0
Nitab4.5_0000506g0030 Nicotiana tabacum HOM05D007047 ORTHO05D009177 4.4e-18 96.7 493 27.0
Oeu045687.1 Olea europaea HOM05D007047 ORTHO05D009177 7.5e-18 95.9 467 28.1
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 1.3e-17 95.1 408 28.4
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 1.7e-17 94.7 236 33.1
FAN27G3081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 3.7e-17 93.6 296 28.4
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 6.4e-17 92.8 388 28.1
Nitab4.5_0006375g0010 Nicotiana tabacum HOM05D007047 ORTHO05D009177 8.3e-17 92.4 387 27.4
CAN.G62.14 Capsicum annuum HOM05D007047 ORTHO05D009177 1.1e-16 92.0 440 30.0
Peaxi162Scf00190g01213 Petunia axillaris HOM05D007047 ORTHO05D009177 1.1e-16 92.0 420 26.2
EL10Ac4g09553 Beta vulgaris HOM05D007047 ORTHO05D009177 1.4e-16 91.7 392 29.6
Solyc06g060860.2 Solanum lycopersicum HOM05D007047 ORTHO05D009177 2.4e-16 90.9 504 26.4
Eucgr.D02116 Eucalyptus grandis HOM05D007047 ORTHO05D009177 4.1e-16 90.1 304 30.6
FAN20G0731 Fragaria x ananassa HOM05D007047 ORTHO05D009177 4.1e-16 90.1 311 30.9
BraA08t33261Z Brassica rapa HOM05D007047 ORTHO05D009177 5.4e-16 89.7 396 28.0
Sopen06g021010 Solanum pennellii HOM05D007047 ORTHO05D009177 1.2e-15 88.6 500 26.2
Thhalv10027153m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 1.6e-15 88.2 439 26.9
MSTRG.25515 Avicennia marina HOM05D007047 ORTHO05D009177 3.5e-15 87.0 449 27.6
Sed0008627 Sechium edule HOM05D007047 ORTHO05D009177 3.5e-15 87.0 304 28.0
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 6.0e-15 86.3 397 28.0
BcaC07g38023 Brassica carinata HOM05D007047 ORTHO05D009177 2.3e-14 84.3 419 27.7
BolC8t48412H Brassica oleracea HOM05D007047 ORTHO05D009177 3.9e-14 83.6 421 27.1
Cpa.g.sc559.1 Carica papaya HOM05D007047 ORTHO05D009177 3.9e-14 83.6 325 27.7
Gohir.D08G185400 Gossypium hirsutum HOM05D007047 ORTHO05D009177 5.1e-14 83.2 169 41.4
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 6.6e-14 82.8 435 25.3
Oeu045675.1 Olea europaea HOM05D007047 ORTHO05D009177 2.5e-13 80.9 344 28.8
CARHR223430 Cardamine hirsuta HOM05D007047 ORTHO05D009177 9.5e-13 79.0 440 25.9
AT4G16807 Arabidopsis thaliana HOM05D007047 ORTHO05D009177 1.2e-12 78.6 454 26.2
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 2.1e-12 77.8 106 40.6
ECA240G0572 Erigeron canadensis HOM05D007047 ORTHO05D009177 4.0e-11 73.6 401 24.9
Aa31LG2G12990 Aethionema arabicum HOM05D007047 ORTHO05D009177 1.2e-10 72.0 406 24.1
HPP92_022107 Vanilla planifolia HOM05D007047 ORTHO05D009177 4.9e-09 66.6 58 55.2
Cpa.g.sc89.13 Carica papaya HOM05D007047 ORTHO05D009177 3.2e-08 63.9 144 38.2
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 3.2e-08 63.9 252 27.8
FvH4_5g19900 Fragaria vesca HOM05D007047 ORTHO05D009177 2.3e-06 57.8 151 34.4
Lsat_1_v5_gn_4_126100 Lactuca sativa HOM05D007047 ORTHO05D009177 8.7e-06 55.8 397 23.9


User provided reference genes

Program Settings