Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G202150 Glycine max HOM05D001685 ORTHO05D006653 1.7e-60 235.7 113 100.0
Glyma.01G148100 Glycine max HOM05D001685 ORTHO05D006653 4.2e-59 231.1 112 98.2
Phvul.002G003900 Phaseolus vulgaris HOM05D001685 ORTHO05D006653 4.0e-49 198.0 112 85.7
VMungo0331G1399 Vigna mungo HOM05D001685 ORTHO05D006653 6.3e-47 190.7 109 82.6
arahy.Tifrunner.gnm1.ann1.KF4YKV Arachis hypogaea HOM05D001685 ORTHO05D006653 8.8e-41 170.2 118 71.2
arahy.Tifrunner.gnm1.ann1.ZC6F0H Arachis hypogaea HOM05D001685 ORTHO05D006653 1.2e-40 169.9 118 70.3
VMungo1383G3233 Vigna mungo HOM05D001685 ORTHO05D006653 1.2e-40 169.9 90 88.9
arahy.Tifrunner.gnm1.ann1.B8I18B Arachis hypogaea HOM05D001685 ORTHO05D006653 2.0e-40 169.1 118 71.2
TPR.G18576 Trifolium pratense HOM05D001685 ORTHO05D006653 2.7e-37 158.7 118 68.6
Lj3g0002633 Lotus japonicus HOM05D001685 ORTHO05D006653 1.7e-36 156.0 118 67.8
Ca_09792_v3 Cicer arietinum L. HOM05D001685 ORTHO05D006653 6.5e-36 154.1 119 67.2
Psat6g138600 Pisum sativum HOM05D001685 ORTHO05D006653 4.2e-35 151.4 118 64.4
Medtr1g073010 Medicago truncatula HOM05D001685 ORTHO05D006653 1.2e-34 149.8 118 61.9
Lalb_Chr19g0128141 Lupinus albus HOM05D001685 ORTHO05D006653 1.2e-32 143.3 117 65.0
Cfa011498 Carpinus fangiana HOM05D002515 ORTHO05D006653 1.3e-31 139.8 118 60.2
Haze_24093 Corylus avellana HOM05D001685 ORTHO05D006653 8.3e-31 137.1 118 60.2
CiPaw.13G094700 Carya illinoinensis HOM05D001685 ORTHO05D006653 3.1e-30 135.2 112 58.9
TAR381G0153 Trochodendron aralioides HOM05D001685 ORTHO05D006653 1.2e-29 133.3 118 55.9
TAR636G3542 Trochodendron aralioides HOM05D001685 ORTHO05D006653 7.8e-29 130.6 118 55.1
Prupe.6G078100 Prunus persica HOM05D001685 ORTHO05D006653 2.3e-28 129.0 118 55.9
VMungo1383G1510 Vigna mungo HOM05D001685 ORTHO05D006653 3.8e-28 128.3 69 85.5
PGR083G0190 Punica granatum HOM05D001685 ORTHO05D006653 1.1e-27 126.7 118 52.5
Migut.J01517 Erythranthe guttata HOM05D001685 ORTHO05D006653 3.6e-26 121.7 110 54.5
Lsat_1_v5_gn_8_73061 Lactuca sativa HOM05D001685 ORTHO05D006653 1.0e-25 120.2 110 55.5
THA.LOC104826328 Tarenaya hassleriana HOM05D001685 ORTHO05D006653 1.0e-25 120.2 96 58.3
Cpa.g.sc81.154 Carica papaya HOM05D001685 ORTHO05D006653 5.2e-25 117.9 113 51.3
Oeu052796.1 Olea europaea HOM05D001685 ORTHO05D006653 1.5e-24 116.3 112 53.6
PSO384G4450 Papaver somniferum HOM05D001685 ORTHO05D006653 2.6e-24 115.5 118 49.2
TWI79G0438 Tripterygium wilfordii HOM05D001685 ORTHO05D006653 2.6e-24 115.5 113 50.4
Aa31sc36G30 Aethionema arabicum HOM05D001685 ORTHO05D006653 3.4e-24 115.2 118 46.6
A08p35550 Brassica napus HOM05D001685 ORTHO05D006653 7.5e-24 114.0 96 56.2
BraA08t35461Z Brassica rapa HOM05D001685 ORTHO05D006653 7.5e-24 114.0 96 56.2
Atru.chr3.3899 Acer truncatum HOM05D001685 ORTHO05D006653 9.8e-24 113.6 84 64.3
ECA236G2424 Erigeron canadensis HOM05D001685 ORTHO05D006653 1.7e-23 112.8 110 53.6
HanXRQChr05g0134921 Helianthus annuus HOM05D001685 ORTHO05D006653 1.7e-23 112.8 110 51.8
BcaB03g13384 Brassica carinata HOM05D001685 ORTHO05D006653 2.2e-23 112.5 96 55.2
C08p03210 Brassica napus HOM05D001685 ORTHO05D006653 2.2e-23 112.5 96 55.2
BolC8t47119H Brassica oleracea HOM05D001685 ORTHO05D006653 2.2e-23 112.5 96 55.2
ATR0618G259 Amborella trichopoda HOM05D001685 ORTHO05D006653 4.1e-22 108.2 97 53.6
Eucgr.B02369 Eucalyptus grandis HOM05D001685 ORTHO05D006653 5.4e-22 107.8 96 53.1
Cc10_g08830 Coffea canephora HOM05D001685 ORTHO05D006653 1.2e-21 106.7 99 56.6
SEGI_38445 Sequoiadendron giganteum HOM05D001685 ORTHO05D006653 1.2e-21 106.7 94 57.4
SEGI_41152 Sequoiadendron giganteum HOM05D001685 ORTHO05D006653 1.6e-21 106.3 95 54.7
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 4.6e-21 104.8 98 54.1
AUR62001788 Chenopodium quinoa HOM05D001685 ORTHO05D006653 5.9e-21 104.4 117 45.3
Duzib150G0753 Durio zibethinus HOM05D001685 ORTHO05D006653 5.9e-21 104.4 88 59.1
AUR62009576 Chenopodium quinoa HOM05D001685 ORTHO05D006653 1.0e-20 103.6 117 44.4
Manes.07G091000 Manihot esculenta HOM05D001685 ORTHO05D006653 1.3e-20 103.2 113 47.8
Os11g0704300 Oryza sativa ssp. japonica HOM05D001685 ORTHO05D006653 1.3e-20 103.2 88 58.0
Manes.07G091200 Manihot esculenta HOM05D001685 ORTHO05D006653 5.0e-20 101.3 115 47.0
Aqoxy5G01203 Aquilegia oxysepala HOM05D001685 ORTHO05D006653 1.1e-19 100.1 90 55.6
AL1G17800 Arabidopsis lyrata HOM05D001685 ORTHO05D006653 1.1e-19 100.1 96 50.0
AT1G07615 Arabidopsis thaliana HOM05D001685 ORTHO05D006653 1.5e-19 99.8 88 53.4
Nn2g10368 Nelumbo nucifera HOM05D001685 ORTHO05D006653 1.5e-19 99.8 113 45.1
HPP92_014383 Vanilla planifolia HOM05D001685 ORTHO05D006653 1.5e-19 99.8 88 56.8
Actinidia07035 Actinidia chinensis HOM05D001685 ORTHO05D006653 1.9e-19 99.4 113 46.9
Thhalv10007444m.g Eutrema salsugineum HOM05D001685 ORTHO05D006653 3.3e-19 98.6 118 41.5
QL01p032067 Quercus lobata HOM05D001685 ORTHO05D006653 4.3e-19 98.2 115 45.2
Hund18911 Selenicereus undatus HOM05D001685 ORTHO05D006653 4.3e-19 98.2 99 47.5
RcHm_v2.0_Chr2g0137651 Rosa chinensis HOM05D001685 ORTHO05D006653 5.6e-19 97.8 118 45.8
SalBow6G3863 Salvia bowleyana HOM05D001685 ORTHO05D006653 1.2e-18 96.7 117 44.4
FAN21G0377 Fragaria x ananassa HOM05D002515 ORTHO05D006653 2.1e-18 95.9 114 44.7
RcHm_v2.0_Chr5g0064441 Rosa chinensis HOM05D001685 ORTHO05D006653 2.8e-18 95.5 118 44.9
Aqoxy4G02919 Aquilegia oxysepala HOM05D001685 ORTHO05D006653 8.0e-18 94.0 81 56.8
DCAR_004329 Daucus carota HOM05D001685 ORTHO05D006653 1.8e-17 92.8 83 54.2
CDE02G4303 Ceratophyllum demersum HOM05D001685 ORTHO05D006653 3.1e-17 92.0 96 46.9
MSTRG.19725 Avicennia marina HOM05D001685 ORTHO05D006653 4.0e-17 91.7 108 45.4
DCAR_005335 Daucus carota HOM05D001685 ORTHO05D006653 1.2e-16 90.1 83 53.0
Nitab4.5_0000317g0040 Nicotiana tabacum HOM05D001685 ORTHO05D006653 2.0e-16 89.4 70 60.0
Peaxi162Scf00066g00069 Petunia axillaris HOM05D001685 ORTHO05D006653 2.6e-16 89.0 98 49.0
Zm00001eb417820 Zea mays HOM05D001685 ORTHO05D006653 2.6e-16 89.0 92 50.0
FvH4_3g36011 Fragaria vesca HOM05D001685 ORTHO05D006653 3.4e-16 88.6 118 41.5
Gohir.A13G224400 Gossypium hirsutum HOM05D001685 ORTHO05D006653 7.5e-16 87.4 119 43.7
Gohir.D13G229400 Gossypium hirsutum HOM05D001685 ORTHO05D006653 7.5e-16 87.4 119 43.7
Gorai.013G260100 Gossypium raimondii HOM05D001685 ORTHO05D006653 7.5e-16 87.4 119 43.7
COL.COLO4_19167 Corchorus olitorius HOM05D001685 ORTHO05D006653 4.9e-15 84.7 122 41.8
Dinv12423 Davidia involucrata HOM05D001685 ORTHO05D006653 4.9e-15 84.7 118 42.4
CsaV3_5G036630 Cucumis sativus L. HOM05D001685 ORTHO05D006653 8.3e-15 84.0 112 41.1
ClCG05G026700 Citrullus lanatus HOM05D001685 ORTHO05D006653 1.9e-14 82.8 112 40.2
Thecc.09G300600 Theobroma cacao HOM05D001685 ORTHO05D006653 4.1e-14 81.6 118 40.7
MELO3C012459.2 Cucumis melo HOM05D001685 ORTHO05D006653 7.0e-14 80.9 96 44.8
MD11G1109500 Malus domestica HOM05D001685 ORTHO05D006653 7.0e-14 80.9 112 39.3
Sed0007817 Sechium edule HOM05D001685 ORTHO05D006653 2.7e-13 79.0 114 39.5
Zm00001eb164640 Zea mays HOM05D001685 ORTHO05D006653 2.7e-13 79.0 97 45.4
CSS0035660 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D006653 3.5e-13 78.6 118 39.8
vmacro03073 Vaccinium macrocarpon HOM05D001685 ORTHO05D006653 7.8e-13 77.4 113 40.7
Mapoly0058s0072 Marchantia polymorpha HOM05D001685 ORTHO05D006653 1.0e-12 77.0 76 51.3
GSVIVG01024971001 Vitis vinifera HOM05D001685 ORTHO05D006653 1.0e-12 77.0 113 38.9
Dinv16999 Davidia involucrata HOM05D001685 ORTHO05D006653 1.3e-12 76.6 118 39.0
Dinv42948 Davidia involucrata HOM05D001685 ORTHO05D006653 1.3e-12 76.6 118 39.0
Dinv43152 Davidia involucrata HOM05D001685 ORTHO05D006653 1.3e-12 76.6 118 39.0
EL10As8g23878 Beta vulgaris HOM05D001685 ORTHO05D006653 1.5e-11 73.2 130 34.6
CBR_g39640 Chara braunii HOM05D001685 ORTHO05D006653 1.9e-11 72.8 81 40.7
Solyc04g058140.3 Solanum lycopersicum HOM05D001685 ORTHO05D006653 2.5e-11 72.4 110 38.2
Sopen04g026040 Solanum pennellii HOM05D001685 ORTHO05D006653 2.5e-11 72.4 110 38.2
CAN.G1325.3 Capsicum annuum HOM05D001685 ORTHO05D006653 7.3e-11 70.9 110 37.3
Potri.001G239600 Populus trichocarpa HOM05D001685 ORTHO05D006653 7.3e-11 70.9 96 39.6
Glyma.11G040502 Glycine max HOM05D001685 ORTHO05D006653 1.6e-10 69.7 41 82.9
A09p66260 Brassica napus HOM05D001685 ORTHO05D006653 2.8e-10 68.9 110 34.5
BraA09t41964Z Brassica rapa HOM05D001685 ORTHO05D006653 2.8e-10 68.9 110 34.5
unitig_37.g12764 Utricularia gibba HOM05D001685 ORTHO05D006653 3.6e-10 68.6 81 45.7
BcaC07g42487 Brassica carinata HOM05D001685 ORTHO05D006653 1.1e-09 67.0 118 32.2
CARHR007400 Cardamine hirsuta HOM05D001685 ORTHO05D006653 1.4e-09 66.6 118 32.2
Sabra16G0144500 Salix brachista HOM05D001685 ORTHO05D006653 1.4e-09 66.6 96 39.6
BcaC07g41983 Brassica carinata HOM05D001685 ORTHO05D006653 1.8e-09 66.2 110 33.6
C08p50430 Brassica napus HOM05D001685 ORTHO05D006653 1.8e-09 66.2 110 33.6
BolC8t52571H Brassica oleracea HOM05D001685 ORTHO05D006653 1.8e-09 66.2 110 33.6
Actinidia37203 Actinidia chinensis HOM05D001685 ORTHO05D006653 3.1e-09 65.5 70 44.3
Sp1g06330 Schrenkiella parvula HOM05D001685 ORTHO05D006653 3.1e-09 65.5 88 39.8
PGSC0003DMG400046448 Solanum tuberosum HOM05D001685 ORTHO05D006653 3.1e-09 65.5 86 43.0
Sc21g0005770 Simmondsia chinensis HOM05D001685 ORTHO05D006653 5.2e-09 64.7 118 30.5
Manes.01G174600 Manihot esculenta HOM05D001685 ORTHO05D006653 6.8e-09 64.3 113 35.4
Carub.0001s0694 Capsella rubella HOM05D001685 ORTHO05D006653 2.6e-08 62.4 88 39.8
Manes.07G090600 Manihot esculenta HOM05D001685 ORTHO05D006653 2.6e-08 62.4 110 34.5
CAN.G311.3 Capsicum annuum HOM05D001685 ORTHO05D000105 4.4e-08 61.6 43 65.1
CDE09G0753 Ceratophyllum demersum HOM05D001685 ORTHO05D006653 4.4e-08 61.6 70 45.7
QL08p046190 Quercus lobata HOM05D001685 ORTHO05D006653 1.3e-07 60.1 109 33.0
Pp3c5_26480 Physcomitrium patens HOM05D001685 ORTHO05D006653 6.4e-07 57.8 97 37.1
SMO134G0124 Selaginella moellendorffii HOM05D001685 ORTHO05D006653 1.9e-06 56.2 72 41.7
Manes.01G174332 Manihot esculenta HOM05D001685 ORTHO05D006653 5.4e-06 54.7 41 58.5
Glyma.15G095700 Glycine max HOM05D001685 ORTHO05D007488 9.2e-06 53.9 87 39.1
PRCOL_00003098 Prasinoderma coloniale HOM05D001685 ORTHO05D007488 9.2e-06 53.9 75 41.3
Rhsim13G0082800 Rhododendron simsii HOM05D001685 ORTHO05D006653 9.2e-06 53.9 73 39.7


User provided reference genes

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