Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G190900 Glycine max HOM05D008801 ORTHO05D010819 7.6e-58 228.0 241 100.0
Glyma.11G051300 Glycine max HOM05D008801 ORTHO05D010819 6.1e-39 165.2 242 84.7
VMungo1215G0318 Vigna mungo HOM05D008801 ORTHO05D010819 2.7e-31 139.8 307 66.4
Phvul.002G014100 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 3.9e-30 136.0 311 60.8
arahy.Tifrunner.gnm1.ann1.N2JMJ4 Arachis hypogaea HOM05D008801 ORTHO05D010819 2.0e-21 107.1 90 70.0
Ca_24714_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 5.7e-21 105.5 87 73.6
Ca_24729_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 5.7e-21 105.5 87 73.6
arahy.Tifrunner.gnm1.ann1.EBVI20 Arachis hypogaea HOM05D008801 ORTHO05D010819 3.1e-19 99.8 80 70.0
Lalb_Chr16g0378731 Lupinus albus HOM05D008801 ORTHO05D010819 1.2e-18 97.8 241 55.2
Ciclev10026322m.g Citrus clementina HOM05D008801 ORTHO05D010819 1.7e-17 94.0 85 63.5
Medtr5g016250 Medicago truncatula HOM05D008801 ORTHO05D010819 2.5e-16 90.1 76 68.4
Glyma.05G102100 Glycine max HOM05D008801 ORTHO05D010819 9.4e-16 88.2 75 68.0
TPR.G26876 Trifolium pratense HOM05D008801 ORTHO05D010819 9.4e-16 88.2 77 70.1
Phvul.003G238200 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 3.0e-14 83.2 59 78.0
Lalb_Chr05g0213471 Lupinus albus HOM05D008801 ORTHO05D010819 1.5e-13 80.9 74 60.8
Carub.0007s0283 Capsella rubella HOM05D010159 ORTHO05D012416 1.3e-12 77.8 85 56.5
THA.LOC104807612 Tarenaya hassleriana HOM05D008801 ORTHO05D010819 2.8e-12 76.6 77 57.1
Gohir.A11G218200 Gossypium hirsutum HOM05D008801 ORTHO05D010819 6.3e-12 75.5 86 55.8
AT4G37450 Arabidopsis thaliana HOM05D010159 ORTHO05D012416 8.2e-12 75.1 77 57.1
VMungo0251G0048 Vigna mungo HOM05D008801 ORTHO05D010819 4.1e-11 72.8 59 69.5
Medtr4g095280 Medicago truncatula HOM05D008801 ORTHO05D010819 9.1e-11 71.6 84 60.7
CSS0031242 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 2.0e-10 70.5 75 53.3
Duzib187G0657 Durio zibethinus HOM05D008801 ORTHO05D010819 2.7e-10 70.1 86 51.2
Gohir.D12G072500 Gossypium hirsutum HOM05D008801 ORTHO05D010819 3.5e-10 69.7 66 56.1
Gorai.008G079800 Gossypium raimondii HOM05D008801 ORTHO05D010819 3.5e-10 69.7 66 56.1
CSS0039488 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 4.5e-10 69.3 75 52.0
MELO3C007601.2 Cucumis melo HOM05D022074 ORTHO05D028887 4.5e-10 69.3 81 55.6
Lj2g0006888 Lotus japonicus HOM05D008801 ORTHO05D010819 3.8e-09 66.2 239 62.3
Aa31LG6G14310 Aethionema arabicum HOM05D010159 ORTHO05D012416 8.5e-09 65.1 77 54.5
Ca_13935_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 1.5e-08 64.3 58 60.3
COL.COLO4_11520 Corchorus olitorius HOM05D008801 ORTHO05D010819 4.2e-08 62.8 57 56.1
Manes.12G113000 Manihot esculenta HOM05D008801 ORTHO05D010819 9.4e-08 61.6 60 55.0
Thecc.01G067400 Theobroma cacao HOM05D008801 ORTHO05D010819 9.4e-08 61.6 57 57.9
CARHR245850 Cardamine hirsuta HOM05D010159 ORTHO05D012416 1.2e-07 61.2 59 57.6
Gohir.A12G067800 Gossypium hirsutum HOM05D008801 ORTHO05D010819 2.1e-07 60.5 59 54.2
Gohir.A12G068100 Gossypium hirsutum HOM05D008801 ORTHO05D010819 2.1e-07 60.5 59 54.2
Gorai.008G079900 Gossypium raimondii HOM05D008801 ORTHO05D010819 2.1e-07 60.5 59 54.2
Duzib264G0993 Durio zibethinus HOM05D008801 ORTHO05D010819 6.1e-07 58.9 57 56.1
Gohir.D12G072600 Gossypium hirsutum HOM05D008801 ORTHO05D010819 1.8e-06 57.4 59 52.5
Duzib147G0385 Durio zibethinus HOM05D008801 ORTHO05D010819 3.0e-06 56.6 66 48.5
CiPaw.01G008400 Carya illinoinensis HOM05D008801 ORTHO05D010819 4.0e-06 56.2 85 48.2


User provided reference genes

Program Settings