Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 1.3e-56 223.4 170 100.0
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 1.1e-50 203.8 170 90.0
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 4.7e-46 188.3 170 87.1
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 8.9e-37 157.5 163 68.1
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 7.8e-33 144.4 174 76.4
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.0e-32 144.1 174 76.4
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 1.3e-32 143.7 163 69.9
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 7.3e-31 137.9 170 71.2
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 7.3e-31 137.9 170 71.2
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 9.5e-31 137.5 163 65.0
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 2.3e-29 132.9 167 65.3
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 7.6e-28 127.9 174 71.8
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 9.2e-26 120.9 170 66.5
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 7.8e-25 117.9 170 65.3
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 8.6e-24 114.4 163 64.4
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 1.5e-23 113.6 166 65.7
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 2.5e-23 112.8 167 68.9
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 3.3e-23 112.5 170 64.1
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 9.6e-23 110.9 164 66.5
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 9.6e-23 110.9 164 66.5
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.1e-22 109.8 167 62.9
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 2.8e-22 109.4 164 70.1
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 6.2e-22 108.2 165 50.9
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 6.2e-22 108.2 138 79.0
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 6.2e-22 108.2 153 71.9
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.1e-21 107.5 128 81.2
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 2.4e-21 106.3 128 74.2
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.4e-21 106.3 170 60.6
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 2.4e-21 106.3 164 65.2
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 3.1e-21 105.9 173 64.2
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 3.1e-21 105.9 171 63.7
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.1e-21 105.9 171 53.8
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 3.1e-21 105.9 171 55.6
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 6.9e-21 104.8 142 64.8
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.2e-20 104.0 155 67.7
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 1.5e-20 103.6 133 69.2
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 2.6e-20 102.8 133 72.9
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.6e-20 102.8 142 72.5
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 3.4e-20 102.4 151 68.9
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 5.8e-20 101.7 164 65.9
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 5.8e-20 101.7 167 63.5
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 7.6e-20 101.3 162 61.7
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 9.9e-20 100.9 129 79.8
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 9.9e-20 100.9 148 69.6
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.7e-19 100.1 170 64.1
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 2.2e-19 99.8 135 76.3
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 3.8e-19 99.0 166 62.0
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 4.9e-19 98.6 169 62.7
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 4.9e-19 98.6 166 62.0
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 6.4e-19 98.2 165 63.0
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 8.4e-19 97.8 136 69.1
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 8.4e-19 97.8 153 64.1
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 1.1e-18 97.4 153 64.1
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 1.1e-18 97.4 153 65.4
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 1.1e-18 97.4 153 65.4
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 1.1e-18 97.4 148 62.8
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.1e-18 97.4 170 63.5
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 1.4e-18 97.1 136 67.6
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 1.4e-18 97.1 165 50.3
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 1.9e-18 96.7 163 62.0
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 1.9e-18 96.7 169 55.6
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 3.2e-18 95.9 153 61.4
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 9.3e-18 94.4 162 54.3
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 9.3e-18 94.4 129 67.4
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 1.2e-17 94.0 127 72.4
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 2.1e-17 93.2 136 64.7
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 2.1e-17 93.2 169 56.2
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 2.1e-17 93.2 165 62.4
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 2.1e-17 93.2 127 73.2
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 4.6e-17 92.0 156 54.5
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 7.8e-17 91.3 210 55.7
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 1.0e-16 90.9 159 62.3
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 1.0e-16 90.9 160 56.9
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 5.1e-16 88.6 157 68.8
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 6.6e-16 88.2 149 66.4
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 1.5e-15 87.0 146 65.1
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 3.3e-15 85.9 131 59.5
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 7.3e-15 84.7 167 59.3
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 7.3e-15 84.7 147 61.9
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 4.8e-14 82.0 137 66.4
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 1.8e-13 80.1 124 54.0
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 2.4e-13 79.7 147 59.2
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 5.3e-13 78.6 162 54.9
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 5.8e-12 75.1 148 62.2
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 7.6e-12 74.7 150 38.7
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 9.9e-12 74.3 147 59.9
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 1.7e-11 73.6 130 66.2
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.9e-11 72.8 148 58.1
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 4.9e-11 72.0 128 53.9
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 6.4e-11 71.6 180 47.8
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 1.1e-10 70.9 148 57.4
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 2.4e-10 69.7 116 61.2
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.4e-10 69.7 142 57.7
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 2.4e-10 69.7 149 59.7
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 5.4e-10 68.6 128 47.7
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 1.6e-09 67.0 148 52.7
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 6.7e-08 61.6 157 56.7
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 6.7e-08 61.6 107 63.6
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.1e-07 60.8 101 66.3
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 7.4e-07 58.2 149 48.3


User provided reference genes

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