Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G088700 Glycine max HOM05D000549 ORTHO05D008331 3.3e-34 147.9 80 100.0
Glyma.17G034100 Glycine max HOM05D000549 ORTHO05D008331 4.3e-26 120.9 74 83.8
Glyma.07G239200 Glycine max HOM05D000549 ORTHO05D008331 1.7e-25 119.0 74 82.4
VMungo1215G3380 Vigna mungo HOM05D000549 ORTHO05D008331 1.7e-25 119.0 74 81.1
arahy.Tifrunner.gnm1.ann1.BXA2NV Arachis hypogaea HOM05D000549 ORTHO05D008331 3.1e-24 114.8 74 75.7
arahy.Tifrunner.gnm1.ann1.Q3474R Arachis hypogaea HOM05D000549 ORTHO05D008331 3.1e-24 114.8 74 75.7
RcHm_v2.0_Chr4g0425501 Rosa chinensis HOM05D000549 ORTHO05D008331 3.1e-24 114.8 74 79.7
Lalb_Chr07g0182061 Lupinus albus HOM05D000549 ORTHO05D008331 9.1e-24 113.2 73 79.5
Cfa016414 Carpinus fangiana HOM05D000549 ORTHO05D008331 1.5e-23 112.5 74 74.3
Haze_06693 Corylus avellana HOM05D000549 ORTHO05D008331 2.6e-23 111.7 74 74.3
CANSAT78G1351 Cannabis sativa HOM05D000549 ORTHO05D008331 3.4e-23 111.3 74 77.0
FAN07G1291 Fragaria x ananassa HOM05D000549 ORTHO05D008331 3.4e-23 111.3 74 73.0
Phvul.003G115100 Phaseolus vulgaris HOM05D000549 ORTHO05D008331 3.4e-23 111.3 73 76.7
Ca_21437_v3 Cicer arietinum L. HOM05D000549 ORTHO05D008331 4.5e-23 110.9 73 75.3
Psat4g022760 Pisum sativum HOM05D000549 ORTHO05D008331 4.5e-23 110.9 73 74.0
CiPaw.01G137600 Carya illinoinensis HOM05D000549 ORTHO05D008331 5.9e-23 110.5 74 73.0
Prupe.1G116000 Prunus persica HOM05D000549 ORTHO05D008331 5.9e-23 110.5 73 75.3
CSS0026955 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D008331 1.3e-22 109.4 74 74.3
Eucgr.A00382 Eucalyptus grandis HOM05D000549 ORTHO05D008331 1.3e-22 109.4 74 74.3
TPR.G25420 Trifolium pratense HOM05D000549 ORTHO05D008331 1.3e-22 109.4 74 71.6
QL06p012490 Quercus lobata HOM05D000549 ORTHO05D008331 1.7e-22 109.0 74 73.0
FAN12G3084 Fragaria x ananassa HOM05D000549 ORTHO05D008331 3.8e-22 107.8 74 73.0
Lj4g0025343 Lotus japonicus HOM05D000549 ORTHO05D008331 3.8e-22 107.8 72 76.4
QL06p012463 Quercus lobata HOM05D000065 ORTHO05D001606 3.8e-22 107.8 74 73.0
Medtr4g122220 Medicago truncatula HOM05D000549 ORTHO05D008331 6.5e-22 107.1 73 71.2
FvH4_4g19880 Fragaria vesca HOM05D000549 ORTHO05D008331 1.1e-21 106.3 74 71.6
GSVIVG01034981001 Vitis vinifera HOM05D000549 ORTHO05D008331 4.2e-21 104.4 74 70.3
MD16G1152800 Malus domestica HOM05D000549 ORTHO05D008331 5.5e-21 104.0 73 71.2
COL.COLO4_34605 Corchorus olitorius HOM05D000549 ORTHO05D008331 7.2e-21 103.6 74 70.3
Rhsim04G0239600 Rhododendron simsii HOM05D000549 ORTHO05D008331 9.4e-21 103.2 74 71.6
Ciclev10005645m.g Citrus clementina HOM05D000549 ORTHO05D008331 1.2e-20 102.8 74 67.6
TWI09G1635 Tripterygium wilfordii HOM05D000549 ORTHO05D008331 1.2e-20 102.8 74 68.9
Sed0013117 Sechium edule HOM05D000549 ORTHO05D008331 2.7e-20 101.7 74 68.9
Sabra10G0112700 Salix brachista HOM05D000549 ORTHO05D008331 3.6e-20 101.3 74 66.2
THA.LOC104821796 Tarenaya hassleriana HOM05D000549 ORTHO05D008331 3.6e-20 101.3 74 67.6
PGR031G3871 Punica granatum HOM05D000549 ORTHO05D008331 6.1e-20 100.5 73 68.5
RcHm_v2.0_Chr4g0425511 Rosa chinensis HOM05D000549 ORTHO05D008331 6.1e-20 100.5 72 70.8
TAR636G0396 Trochodendron aralioides HOM05D000549 ORTHO05D008331 1.0e-19 99.8 74 68.9
vmacro08038 Vaccinium macrocarpon HOM05D000549 ORTHO05D008331 1.0e-19 99.8 74 68.9
MELO3C021265.2 Cucumis melo HOM05D000549 ORTHO05D008331 1.4e-19 99.4 74 68.9
DCAR_030465 Daucus carota HOM05D000549 ORTHO05D008331 1.4e-19 99.4 74 68.9
Lsat_1_v5_gn_1_41500 Lactuca sativa HOM05D000549 ORTHO05D008331 1.4e-19 99.4 74 67.6
Thhalv10026021m.g Eutrema salsugineum HOM05D000549 ORTHO05D008331 2.3e-19 98.6 74 64.9
Manes.10G028000 Manihot esculenta HOM05D000549 ORTHO05D008331 2.3e-19 98.6 74 64.9
Aa31LG10G5900 Aethionema arabicum HOM05D000549 ORTHO05D008331 3.0e-19 98.2 74 63.5
CsaV3_6G028580 Cucumis sativus L. HOM05D000549 ORTHO05D008331 3.0e-19 98.2 74 67.6
AUR62016220 Chenopodium quinoa HOM05D000549 ORTHO05D008331 3.9e-19 97.8 74 66.2
Actinidia31548 Actinidia chinensis HOM05D000549 ORTHO05D008331 5.1e-19 97.4 75 70.7
AL7G38880 Arabidopsis lyrata HOM05D000549 ORTHO05D008331 5.1e-19 97.4 74 64.9
AT4G16210 Arabidopsis thaliana HOM05D000549 ORTHO05D008331 5.1e-19 97.4 74 64.9
HanXRQChr11g0353461 Helianthus annuus HOM05D000549 ORTHO05D008331 5.1e-19 97.4 74 68.9
Sp7g14710 Schrenkiella parvula HOM05D000549 ORTHO05D008331 5.1e-19 97.4 74 63.5
Thecc.04G302100 Theobroma cacao HOM05D000549 ORTHO05D008331 6.7e-19 97.1 74 64.9
CARHR222590 Cardamine hirsuta HOM05D000549 ORTHO05D008331 8.8e-19 96.7 74 63.5
ClCG06G004550 Citrullus lanatus HOM05D000549 ORTHO05D008331 8.8e-19 96.7 74 68.9
Potri.010G146400 Populus trichocarpa HOM05D000549 ORTHO05D008331 8.8e-19 96.7 74 66.2
Dinv15160 Davidia involucrata HOM05D000549 ORTHO05D008331 1.1e-18 96.3 73 67.1
Lj3A832T19 Lonicera japonica HOM05D000549 ORTHO05D008331 1.1e-18 96.3 74 64.9
Atru.chr4.3030 Acer truncatum HOM05D000549 ORTHO05D008331 1.5e-18 95.9 73 64.4
EL10Ac3g05521 Beta vulgaris HOM05D000549 ORTHO05D008331 1.5e-18 95.9 74 64.9
BcaC06g32997 Brassica carinata HOM05D000549 ORTHO05D008331 1.5e-18 95.9 74 63.5
BcaC06g33455 Brassica carinata HOM05D000549 ORTHO05D008331 1.5e-18 95.9 74 63.5
A03p49680 Brassica napus HOM05D000549 ORTHO05D008331 1.5e-18 95.9 74 63.5
C07p47750 Brassica napus HOM05D000549 ORTHO05D008331 1.5e-18 95.9 74 63.5
BolC7t45300H Brassica oleracea HOM05D000549 ORTHO05D008331 1.5e-18 95.9 74 63.5
BraA03t14067Z Brassica rapa HOM05D000549 ORTHO05D008331 1.5e-18 95.9 74 63.5
Duzib116G0193 Durio zibethinus HOM05D000549 ORTHO05D008331 1.5e-18 95.9 74 64.9
Potri.008G104500 Populus trichocarpa HOM05D000549 ORTHO05D008331 1.5e-18 95.9 74 64.9
Hund11980 Selenicereus undatus HOM05D000549 ORTHO05D008331 1.5e-18 95.9 74 64.9
unitig_0.g2582 Utricularia gibba HOM05D000549 ORTHO05D008331 1.5e-18 95.9 75 64.0
Cpa.g.sc1973.1 Carica papaya HOM05D000549 ORTHO05D008331 2.0e-18 95.5 71 67.6
SGA_v2.0_scaffold104G30071 Striga asiatica HOM05D000549 ORTHO05D008331 2.6e-18 95.1 74 63.5
ECA232G1256 Erigeron canadensis HOM05D000549 ORTHO05D008331 3.3e-18 94.7 74 67.6
Migut.G00070 Erythranthe guttata HOM05D000549 ORTHO05D008331 3.3e-18 94.7 74 60.8
Sc19g0003060 Simmondsia chinensis HOM05D000549 ORTHO05D008331 3.3e-18 94.7 74 62.2
Cc03_g00730 Coffea canephora HOM05D000549 ORTHO05D008331 4.4e-18 94.4 74 63.5
Carub.0007s2531 Capsella rubella HOM05D000549 ORTHO05D008331 5.7e-18 94.0 74 62.2
Solyc01g059830.3 Solanum lycopersicum HOM05D000549 ORTHO05D008331 9.7e-18 93.2 74 62.2
Sopen01g025100 Solanum pennellii HOM05D000549 ORTHO05D008331 9.7e-18 93.2 74 62.2
MBI19_g03253_MAGBIO Magnolia biondii HOM05D000549 ORTHO05D008331 1.7e-17 92.4 74 56.8
Peaxi162Scf00228g00332 Petunia axillaris HOM05D000549 ORTHO05D008331 2.2e-17 92.0 73 61.6
PGSC0003DMG400001206 Solanum tuberosum HOM05D000549 ORTHO05D008331 2.2e-17 92.0 74 62.2
Aqoxy5G02694 Aquilegia oxysepala HOM05D000549 ORTHO05D008331 2.8e-17 91.7 74 62.2
CDE05G1239 Ceratophyllum demersum HOM05D000267 ORTHO05D000298 4.8e-17 90.9 74 62.2
MSTRG.10154 Avicennia marina HOM05D000549 ORTHO05D008331 6.3e-17 90.5 74 59.5
CDE11G0517 Ceratophyllum demersum HOM05D000267 ORTHO05D008331 6.3e-17 90.5 74 60.8
Ah.13g071820 Amaranthus hybridus HOM05D000267 ORTHO05D000298 8.2e-17 90.1 74 63.5
Nitab4.5_0000177g0080 Nicotiana tabacum HOM05D000549 ORTHO05D008331 1.8e-16 89.0 74 58.1
Nitab4.5_0000931g0040 Nicotiana tabacum HOM05D000549 ORTHO05D008331 1.8e-16 89.0 74 58.1
Gohir.D01G023550 Gossypium hirsutum HOM05D000549 ORTHO05D008331 4.1e-16 87.8 76 56.6
Gorai.002G030500 Gossypium raimondii HOM05D000549 ORTHO05D008331 4.1e-16 87.8 76 56.6
PSO063G4475 Papaver somniferum HOM05D000549 ORTHO05D008331 7.0e-16 87.0 73 54.8
PSO782G3736 Papaver somniferum HOM05D000549 ORTHO05D008331 7.0e-16 87.0 73 54.8
Gohir.A01G034800 Gossypium hirsutum HOM05D000549 ORTHO05D008331 1.6e-15 85.9 76 53.9
Gorai.005G093700 Gossypium raimondii HOM05D000549 ORTHO05D008331 1.6e-15 85.9 73 58.9
Lalb_Chr13g0298491 Lupinus albus HOM05D000549 ORTHO05D008331 1.6e-15 85.9 53 77.4
Gohir.D02G083200 Gossypium hirsutum HOM05D000549 ORTHO05D008331 2.0e-15 85.5 73 57.5
Gohir.A02G076000 Gossypium hirsutum HOM05D000549 ORTHO05D008331 2.6e-15 85.1 73 57.5
CAN.G244.4 Capsicum annuum HOM05D000549 ORTHO05D008331 3.5e-15 84.7 74 55.4
SalBow8G4322 Salvia bowleyana HOM05D000549 ORTHO05D008331 1.0e-14 83.2 73 57.5
HPP92_008931 Vanilla planifolia HOM05D000549 ORTHO05D008331 5.0e-14 80.9 74 51.4
Os03g0310400 Oryza sativa ssp. japonica HOM05D000549 ORTHO05D008331 1.9e-13 79.0 74 52.7
Zm00001eb014890 Zea mays HOM05D000549 ORTHO05D008331 2.5e-13 78.6 73 53.4
SEGI_27308 Sequoiadendron giganteum HOM05D000549 ORTHO05D008331 7.2e-13 77.0 76 48.7
AagrBONN_evm.TU.Sc2ySwM_362.574 Anthoceros agrestis HOM05D000549 ORTHO05D008331 1.6e-12 75.9 73 54.8
Pp3c8_12460 Physcomitrium patens HOM05D000549 ORTHO05D008331 8.0e-12 73.6 73 52.1
Pp3c23_900 Physcomitrium patens HOM05D000549 ORTHO05D008331 1.4e-11 72.8 73 49.3
ATR0693G117 Amborella trichopoda HOM05D000549 ORTHO05D008331 2.3e-11 72.0 76 48.7
SMO356G0411 Selaginella moellendorffii HOM05D000549 ORTHO05D008331 5.2e-11 70.9 74 48.6
SHI00127 Sapria himalayana HOM05D000549 ORTHO05D008331 6.7e-11 70.5 72 50.0
Mapoly0152s0018 Marchantia polymorpha HOM05D000549 ORTHO05D008331 6.5e-06 53.9 73 37.0


User provided reference genes

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