Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 3.8e-126 454.9 239 100.0
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 1.3e-89 333.6 191 94.2
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 2.5e-85 319.3 197 87.8
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 1.1e-80 303.9 198 83.8
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 4.3e-77 292.0 198 81.8
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 4.0e-75 285.4 194 79.9
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 1.3e-73 280.4 198 78.3
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 1.4e-72 276.9 197 76.6
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.8e-72 276.6 198 77.3
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 9.2e-72 274.2 199 76.4
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 6.0e-71 271.6 199 75.9
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 6.0e-71 271.6 198 76.3
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 5.0e-70 268.5 198 75.8
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 9.8e-66 254.2 194 72.2
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 7.0e-64 248.1 194 69.6
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 8.6e-62 241.1 194 67.5
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 1.1e-61 240.7 197 71.1
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 2.5e-61 239.6 194 68.6
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 4.3e-61 238.8 194 68.0
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 1.6e-60 236.9 194 68.6
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 2.8e-60 236.1 194 70.1
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 3.6e-60 235.7 192 67.7
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 4.7e-60 235.3 190 65.8
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 1.1e-59 234.2 194 66.5
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 1.4e-59 233.8 194 67.5
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 4.0e-59 232.3 195 66.2
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 1.5e-58 230.3 180 70.6
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 1.5e-58 230.3 180 70.6
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 1.5e-58 230.3 194 65.5
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 2.6e-58 229.6 194 64.9
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 2.6e-58 229.6 189 67.2
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 5.8e-58 228.4 160 78.8
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 7.5e-58 228.0 194 64.9
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 7.5e-58 228.0 179 70.4
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 7.5e-58 228.0 194 66.5
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 9.9e-58 227.6 164 75.6
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 9.9e-58 227.6 160 79.4
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 1.7e-57 226.9 173 75.1
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 1.7e-57 226.9 160 78.1
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 1.7e-57 226.9 190 66.8
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 2.2e-57 226.5 161 78.3
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.9e-57 226.1 179 70.4
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 4.9e-57 225.3 191 66.5
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 3.2e-56 222.6 181 70.7
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 3.2e-56 222.6 188 64.9
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 4.1e-56 222.2 191 63.9
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 4.1e-56 222.2 156 76.9
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 4.1e-56 222.2 196 65.8
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.2e-56 221.1 198 65.2
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.2e-56 221.1 198 65.2
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 9.2e-56 221.1 192 64.6
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 1.2e-55 220.7 191 61.8
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 1.6e-55 220.3 154 78.6
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 1.6e-55 220.3 192 65.1
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 2.1e-55 219.9 194 62.9
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 2.7e-55 219.5 190 63.7
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 3.5e-55 219.2 162 75.3
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 3.5e-55 219.2 191 65.4
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 3.5e-55 219.2 154 78.6
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 7.8e-55 218.0 169 74.6
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 1.3e-54 217.2 194 61.3
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.7e-54 216.9 162 75.3
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 1.7e-54 216.9 197 64.5
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 1.7e-54 216.9 198 64.6
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 2.3e-54 216.5 155 76.8
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 2.3e-54 216.5 179 65.9
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 3.9e-54 215.7 194 60.8
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 5.1e-54 215.3 191 61.8
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 6.6e-54 214.9 154 77.3
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 8.6e-54 214.5 194 61.9
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 1.1e-53 214.2 155 75.5
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 1.9e-53 213.4 198 62.1
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 1.9e-53 213.4 181 64.1
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 2.5e-53 213.0 194 60.8
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 3.3e-53 212.6 155 76.1
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 3.3e-53 212.6 169 70.4
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 4.3e-53 212.2 177 65.5
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 4.3e-53 212.2 177 65.5
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 5.6e-53 211.8 155 77.4
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 5.6e-53 211.8 155 77.4
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.6e-52 210.3 155 76.8
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 1.6e-52 210.3 155 76.8
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 1.6e-52 210.3 211 60.2
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 3.6e-52 209.1 155 76.8
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 6.2e-52 208.4 194 60.3
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 6.2e-52 208.4 190 62.6
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 1.8e-51 206.8 228 53.1
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 2.4e-51 206.5 147 75.5
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 2.4e-51 206.5 154 70.8
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 4.0e-51 205.7 154 70.1
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 4.4e-50 202.2 156 71.8
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 1.9e-48 196.8 168 62.5
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 4.1e-48 195.7 180 61.1
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 1.6e-47 193.7 188 61.2
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.7e-46 190.3 194 57.2
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 5.1e-46 188.7 156 68.6
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 6.2e-44 181.8 155 63.9
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 4.0e-43 179.1 152 64.5
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 5.2e-43 178.7 194 54.1
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 6.9e-43 178.3 154 61.0
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 2.6e-42 176.4 163 60.1
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 4.9e-41 172.2 170 57.1
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.1e-37 161.0 139 67.6
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 1.2e-34 151.0 138 59.4
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 6.0e-31 138.7 122 64.8
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 9.6e-29 131.3 91 79.1
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 4.8e-28 129.0 185 46.5
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 1.8e-27 127.1 140 51.4
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 2.4e-27 126.7 163 48.5
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 1.3e-25 120.9 144 50.7
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 2.3e-22 110.2 109 55.0
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 5.8e-18 95.5 99 55.6
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 6.9e-11 72.0 144 36.1
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 5.9e-10 68.9 56 64.3
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 3.8e-09 66.2 152 33.6


User provided reference genes

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