Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G024300 Glycine max HOM05D000139 ORTHO05D214621 1.1e-201 706.4 364 100.0
Glyma.02G040802 Glycine max HOM05D000139 ORTHO05D020776 4.4e-65 252.7 206 67.5
Glyma.01G024500 Glycine max HOM05D000139 ORTHO05D020776 4.1e-63 246.1 197 67.0
Phvul.002G148200 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 4.1e-63 246.1 209 64.6
Lalb_Chr16g0381761 Lupinus albus HOM05D000139 ORTHO05D020776 6.8e-50 202.2 179 60.3
Phvul.002G148400 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 5.9e-38 162.5 150 60.7
Lalb_Chr16g0381701 Lupinus albus HOM05D000139 ORTHO05D020776 1.5e-33 147.9 129 58.9
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 1.4e-31 141.4 187 43.9
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 7.8e-30 135.6 173 43.9
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 8.6e-29 132.1 167 44.3
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 2.5e-28 130.6 173 42.8
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 1.2e-27 128.3 176 40.9
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 1.6e-27 127.9 272 34.2
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 2.8e-27 127.1 192 42.7
Psat2g054920 Pisum sativum HOM05D000081 ORTHO05D014784 1.4e-26 124.8 170 45.9
Medtr5g074200 Medicago truncatula HOM05D000081 ORTHO05D014784 1.8e-26 124.4 228 36.8
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 6.8e-26 122.5 171 38.6
Phvul.008G251700 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 8.9e-26 122.1 176 41.5
TPR.G24967 Trifolium pratense HOM05D000081 ORTHO05D014784 8.9e-26 122.1 167 43.1
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 8.9e-26 122.1 195 39.5
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 2.0e-25 120.9 221 35.7
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 2.0e-25 120.9 162 42.0
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 4.4e-25 119.8 163 40.5
LjContig00141g0001664 Lotus japonicus HOM05D000139 ORTHO05D000103 2.9e-24 117.1 192 39.1
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 2.9e-24 117.1 188 40.4
Phvul.008G251800 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 8.3e-24 115.5 176 42.0
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 1.1e-23 115.2 169 39.1
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 1.4e-23 114.8 173 37.6
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 1.9e-23 114.4 211 34.1
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 1.9e-23 114.4 168 40.5
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 5.4e-23 112.8 168 36.3
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 1.6e-22 111.3 191 36.1
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 2.0e-22 110.9 168 37.5
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 2.0e-22 110.9 207 35.3
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 3.5e-22 110.2 168 38.1
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 4.6e-22 109.8 224 33.5
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 6.0e-22 109.4 167 37.1
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 1.0e-21 108.6 174 38.5
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 1.0e-21 108.6 164 37.8
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 5.0e-21 106.3 174 37.4
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 1.9e-20 104.4 163 37.4
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 2.5e-20 104.0 159 39.0
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 4.3e-20 103.2 174 37.4
Medtr6g078610 Medicago truncatula HOM05D000005 ORTHO05D019269 9.5e-20 102.1 231 32.9
Lj2g0002486 Lotus japonicus HOM05D000005 ORTHO05D000012 1.2e-19 101.7 165 37.0
Lj2g0021893 Lotus japonicus HOM05D000139 ORTHO05D019269 1.2e-19 101.7 165 37.0
Medtr5g073750 Medicago truncatula HOM05D000139 ORTHO05D010351 1.2e-19 101.7 282 28.7
Medtr6g078770 Medicago truncatula HOM05D000139 ORTHO05D019269 1.2e-19 101.7 163 38.7
arahy.Tifrunner.gnm1.ann1.DF7IVU Arachis hypogaea HOM05D000139 ORTHO05D010351 2.8e-19 100.5 178 35.4
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 3.6e-19 100.1 175 37.7
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 4.7e-19 99.8 163 35.6
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 8.1e-19 99.0 157 34.4
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 1.1e-18 98.6 178 34.8
Psat1g119960 Pisum sativum HOM05D000139 ORTHO05D019269 1.1e-18 98.6 158 35.4
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 2.3e-18 97.4 165 35.8
Medtr5g073610 Medicago truncatula HOM05D000139 ORTHO05D010351 4.0e-18 96.7 273 30.4
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 5.2e-18 96.3 175 34.3
Medtr6g075870 Medicago truncatula HOM05D000005 ORTHO05D000012 6.8e-18 95.9 174 36.8
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 1.2e-17 95.1 189 33.3
arahy.Tifrunner.gnm1.ann1.B7RGGF Arachis hypogaea HOM05D000139 ORTHO05D000103 1.5e-17 94.7 131 36.6
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 1.5e-17 94.7 166 37.3
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.5e-17 94.7 216 34.3
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.0e-17 94.4 183 36.6
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 2.6e-17 94.0 189 32.8
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 4.4e-17 93.2 171 33.9
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 5.8e-17 92.8 134 37.3
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 7.5e-17 92.4 143 37.1
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 1.3e-16 91.7 184 33.2
Phvul.008G257033 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.9e-16 89.7 169 36.1
Lj2g0013383 Lotus japonicus HOM05D000139 ORTHO05D019269 6.4e-16 89.4 151 37.7
Medtr5g074150 Medicago truncatula HOM05D000139 ORTHO05D010351 8.3e-16 89.0 200 33.0
Phvul.008G257000 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 8.3e-16 89.0 164 36.6
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.9e-15 87.8 164 34.8
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 7.1e-15 85.9 124 37.1
Phvul.008G257100 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 9.2e-15 85.5 179 34.1
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 2.1e-14 84.3 198 32.8
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 2.7e-14 84.0 165 34.5
Medtr5g074090 Medicago truncatula HOM05D000139 ORTHO05D010351 6.0e-14 82.8 213 29.6
Medtr5g093540 Medicago truncatula HOM05D000139 ORTHO05D014784 7.8e-14 82.4 175 35.4
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 1.6e-11 74.7 137 30.7
Phvul.001G122400 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.7e-11 73.2 167 29.9
Medtr5g074070 Medicago truncatula HOM05D000139 ORTHO05D010351 8.1e-11 72.4 152 31.6
TPR.G27412 Trifolium pratense HOM05D000139 ORTHO05D000103 1.8e-10 71.2 106 41.5
arahy.Tifrunner.gnm1.ann1.CL8DJC Arachis hypogaea HOM05D000139 ORTHO05D000103 3.1e-10 70.5 139 32.4
arahy.Tifrunner.gnm1.ann1.615JIB Arachis hypogaea HOM05D064904 ORTHO05D087328 4.0e-10 70.1 164 32.9
arahy.Tifrunner.gnm1.ann1.YM3EBM Arachis hypogaea HOM05D064904 ORTHO05D085231 4.0e-10 70.1 164 32.9
LjContig00141g0009438 Lotus japonicus HOM05D000081 ORTHO05D014784 5.2e-10 69.7 91 46.2
arahy.Tifrunner.gnm1.ann1.5L9Z02 Arachis hypogaea HOM05D000139 ORTHO05D026354 1.5e-09 68.2 174 28.2
arahy.Tifrunner.gnm1.ann1.1D3WUK Arachis hypogaea HOM05D000139 ORTHO05D083086 5.8e-09 66.2 171 26.9
Lalb_Chr02g0160091 Lupinus albus HOM05D000139 ORTHO05D020776 5.8e-09 66.2 74 56.8
arahy.Tifrunner.gnm1.ann1.NCQ3Z1 Arachis hypogaea HOM05D000139 ORTHO05D000103 1.3e-08 65.1 204 28.9
arahy.Tifrunner.gnm1.ann1.47NBR1 Arachis hypogaea HOM05D002434 ORTHO05D082345 8.4e-08 62.4 174 26.4
Glyma.01G024200 Glycine max HOM05D001056 ORTHO05D000902 1.9e-07 61.2 58 55.2
Medtr5g073660 Medicago truncatula HOM05D000139 ORTHO05D266772 7.1e-07 59.3 189 28.0
Phvul.008G256900 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 7.1e-07 59.3 177 29.9
Ca_05668_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 9.2e-07 58.9 138 33.3
Medtr6g078630 Medicago truncatula HOM05D000005 ORTHO05D019269 3.5e-06 57.0 76 39.5
Ca_05666_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 6.0e-06 56.2 80 42.5


User provided reference genes

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