Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 4.1e-64 248.1 139 100.0
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 1.5e-50 203.0 139 87.1
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 1.5e-50 203.0 139 78.4
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 2.5e-45 185.7 139 78.4
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 9.5e-45 183.7 137 81.8
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 2.1e-44 182.6 142 69.0
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 1.8e-43 179.5 137 78.8
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 1.2e-42 176.8 139 66.9
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 3.4e-42 175.3 142 67.6
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 4.9e-41 171.4 138 77.5
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 1.9e-40 169.5 138 66.7
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 2.4e-40 169.1 137 77.4
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 3.2e-40 168.7 138 73.9
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 4.1e-40 168.3 136 75.0
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 4.1e-40 168.3 136 75.7
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 7.0e-40 167.5 137 65.0
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 1.2e-39 166.8 137 75.9
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 1.2e-39 166.8 140 63.6
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 2.0e-39 166.0 137 76.6
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 2.0e-39 166.0 140 73.6
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 2.0e-39 166.0 137 64.2
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 2.0e-39 166.0 137 64.2
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 2.7e-39 165.6 134 73.1
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 4.6e-39 164.9 137 65.0
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 4.6e-39 164.9 138 71.7
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 6.0e-39 164.5 138 62.3
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 7.8e-39 164.1 140 72.9
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 1.7e-38 162.9 139 64.7
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 3.0e-38 162.2 138 72.5
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 5.0e-38 161.4 139 71.2
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 5.0e-38 161.4 138 72.5
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 6.6e-38 161.0 134 73.1
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 8.6e-38 160.6 134 66.4
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 1.9e-37 159.5 140 62.9
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.9e-37 159.5 140 62.9
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.9e-37 159.5 140 62.9
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 4.3e-37 158.3 137 72.3
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 4.3e-37 158.3 139 71.2
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 7.3e-37 157.5 141 62.4
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 7.3e-37 157.5 137 69.3
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 1.6e-36 156.4 138 71.7
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 1.6e-36 156.4 135 70.4
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 2.1e-36 156.0 134 67.2
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 2.1e-36 156.0 138 58.7
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 2.8e-36 155.6 137 59.9
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 3.6e-36 155.2 136 59.6
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 3.6e-36 155.2 138 71.0
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 4.7e-36 154.8 143 62.9
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 4.7e-36 154.8 143 62.9
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 4.7e-36 154.8 139 72.7
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 8.1e-36 154.1 137 67.9
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 1.1e-35 153.7 136 58.8
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 1.4e-35 153.3 136 58.1
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 1.4e-35 153.3 136 61.0
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 1.4e-35 153.3 137 70.1
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 1.8e-35 152.9 139 71.2
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 2.3e-35 152.5 146 69.9
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 3.1e-35 152.1 136 60.3
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 3.1e-35 152.1 136 60.3
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 3.1e-35 152.1 140 70.0
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 4.0e-35 151.8 136 60.3
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 5.2e-35 151.4 137 67.9
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 5.2e-35 151.4 139 69.8
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 5.2e-35 151.4 140 70.0
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 5.2e-35 151.4 138 70.3
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 6.8e-35 151.0 140 66.4
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 8.9e-35 150.6 137 69.3
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 8.9e-35 150.6 136 60.3
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 1.5e-34 149.8 135 68.9
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 1.5e-34 149.8 140 67.9
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 2.0e-34 149.4 138 58.7
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 2.6e-34 149.1 135 68.1
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 2.6e-34 149.1 142 68.3
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 4.4e-34 148.3 141 67.4
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 1.3e-33 146.7 136 66.9
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 1.7e-33 146.4 137 69.3
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 1.7e-33 146.4 141 68.1
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 6.4e-33 144.4 135 59.3
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 8.3e-33 144.1 140 52.9
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 1.1e-32 143.7 136 57.4
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 1.4e-32 143.3 137 67.2
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 1.9e-32 142.9 139 57.6
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 1.9e-32 142.9 143 57.3
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 2.4e-32 142.5 137 67.2
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 1.6e-31 139.8 134 66.4
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 1.9e-29 132.9 115 66.1
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 6.2e-28 127.9 138 52.9
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 1.1e-27 127.1 137 53.3
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 2.9e-25 119.0 164 45.7
MBI03_g14516_MAGBIO Magnolia biondii HOM05D006738 ORTHO05D008191 3.7e-25 118.6 99 77.8
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 5.4e-24 114.8 113 69.9
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 5.4e-24 114.8 116 58.6
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 2.7e-23 112.5 97 66.0
Glyma.09G210500 Glycine max HOM05D006738 ORTHO05D008191 3.9e-22 108.6 75 78.7
Cc10_g16410 Coffea canephora HOM05D006738 ORTHO05D008191 4.3e-21 105.1 77 67.5
QL09p000342 Quercus lobata HOM05D006738 ORTHO05D008191 4.3e-21 105.1 143 49.7
Cfa008114 Carpinus fangiana HOM05D006738 ORTHO05D008191 5.6e-21 104.8 137 48.2
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 2.1e-20 102.8 111 65.8
SEGI_33861 Sequoiadendron giganteum HOM05D006738 ORTHO05D008191 4.7e-20 101.7 118 59.3
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 3.4e-18 95.5 68 73.5
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 1.3e-17 93.6 130 46.9
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 1.3e-17 93.6 115 60.9
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 2.2e-17 92.8 138 44.9
AagrBONN_evm.TU.Sc2ySwM_228.5134 Anthoceros agrestis HOM05D006738 ORTHO05D008191 6.4e-17 91.3 124 37.9
Mapoly0047s0047 Marchantia polymorpha HOM05D006738 ORTHO05D008191 1.4e-16 90.1 111 42.3
CiPaw.09G026000 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.9e-16 89.7 145 46.9
SMO118G0306 Selaginella moellendorffii HOM05D006738 ORTHO05D008191 1.6e-15 86.7 135 37.8
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 4.6e-15 85.1 111 45.9
Pp3c3_5650 Physcomitrium patens HOM05D006738 ORTHO05D008191 1.1e-13 80.5 128 36.7
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 3.3e-13 79.0 71 57.7
QL09p003020 Quercus lobata HOM05D006738 ORTHO05D008191 1.6e-12 76.6 70 57.1
Oeu017736.2 Olea europaea HOM05D006738 ORTHO05D008191 8.1e-12 74.3 85 50.6
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 4.0e-11 72.0 75 54.7
SHI08988 Sapria himalayana HOM05D006738 ORTHO05D008191 4.2e-08 62.0 75 46.7
CiPaw.16G110800 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.6e-07 60.1 66 51.5


User provided reference genes

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