Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 5.4e-311 1070.1 522 100.0
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 7.9e-294 1013.1 522 93.3
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 1.1e-271 939.5 522 87.0
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 8.3e-251 870.2 523 80.5
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 1.4e-250 869.4 525 80.6
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 2.0e-249 865.5 516 79.1
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 3.3e-247 858.2 518 78.2
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 5.5e-247 857.4 516 78.7
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 1.2e-246 856.3 522 77.8
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 2.8e-246 855.1 516 78.5
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 1.0e-245 853.2 522 76.4
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 1.4e-245 852.8 523 82.0
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 1.8e-245 852.4 514 77.6
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 7.5e-244 847.0 514 77.0
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 1.1e-242 843.2 519 77.6
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 2.4e-242 842.0 516 76.2
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 7.8e-241 837.0 519 76.3
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 2.9e-240 835.1 519 76.3
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 5.0e-240 834.3 519 77.1
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 7.3e-239 830.5 519 75.9
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 2.1e-238 828.9 519 75.7
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 2.8e-238 828.6 519 75.7
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 4.7e-238 827.8 519 76.9
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 3.0e-237 825.1 519 75.3
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 4.0e-237 824.7 519 76.7
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 8.9e-237 823.5 517 76.4
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 2.6e-236 822.0 519 75.7
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 3.4e-236 821.6 519 75.3
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 3.4e-236 821.6 519 74.6
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 9.8e-236 820.1 519 75.1
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 9.8e-236 820.1 554 74.4
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 2.9e-235 818.5 520 74.8
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 4.9e-235 817.8 521 75.0
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 4.9e-235 817.8 520 75.6
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 8.3e-235 817.0 515 75.3
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.4e-234 816.2 520 75.2
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 1.8e-234 815.8 520 74.4
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 2.4e-234 815.5 519 75.1
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 4.1e-234 814.7 520 75.2
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 1.6e-233 812.8 520 74.6
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.0e-233 812.4 524 74.8
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 2.7e-233 812.0 545 72.5
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 2.7e-233 812.0 519 73.8
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 2.7e-233 812.0 520 74.0
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 6.0e-233 810.8 524 74.8
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 6.0e-233 810.8 517 74.9
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.3e-232 809.7 519 74.6
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 1.3e-232 809.7 519 75.0
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 2.3e-232 808.9 520 74.2
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 2.3e-232 808.9 490 77.8
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 2.3e-232 808.9 519 74.4
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.0e-232 808.5 526 74.3
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 3.0e-232 808.5 520 74.0
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.9e-232 808.1 524 74.4
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 6.6e-232 807.4 514 75.1
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 6.6e-232 807.4 519 74.6
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 8.6e-232 807.0 520 72.9
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 8.6e-232 807.0 520 72.9
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 1.9e-231 805.8 520 72.7
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 3.3e-231 805.1 515 75.1
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 4.3e-231 804.7 520 73.3
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 4.3e-231 804.7 520 72.5
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 4.3e-231 804.7 520 72.5
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 5.6e-231 804.3 520 72.7
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 5.6e-231 804.3 520 74.4
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 9.5e-231 803.5 519 74.6
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 9.5e-231 803.5 519 74.2
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.6e-230 802.7 519 72.8
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 2.8e-230 802.0 518 73.0
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 2.8e-230 802.0 545 71.7
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 3.6e-230 801.6 517 72.5
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 3.6e-230 801.6 517 72.5
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 4.7e-230 801.2 518 73.0
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 1.1e-229 800.0 519 74.2
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 2.3e-229 798.9 518 72.8
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 2.3e-229 798.9 518 72.6
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 4.0e-229 798.1 518 73.0
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 4.0e-229 798.1 518 73.0
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 4.0e-229 798.1 519 74.0
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 6.8e-229 797.3 519 73.6
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 9.8e-228 793.5 520 73.1
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 3.7e-227 791.6 519 73.6
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 8.3e-227 790.4 519 73.4
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 1.4e-226 789.6 521 71.8
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 3.2e-226 788.5 519 73.2
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 9.2e-226 786.9 519 72.3
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 7.8e-225 783.9 529 72.0
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.9e-224 781.6 553 69.8
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 6.6e-224 780.8 516 74.2
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 1.2e-222 776.5 520 72.7
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 1.2e-222 776.5 519 72.8
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 1.6e-222 776.2 519 72.4
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 1.6e-222 776.2 519 72.6
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 2.8e-222 775.4 519 72.4
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 4.7e-222 774.6 519 72.8
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 6.2e-222 774.2 518 71.2
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 6.2e-222 774.2 527 71.2
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.1e-221 773.5 519 72.3
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.4e-221 773.1 519 72.1
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 2.3e-221 772.3 472 77.3
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 2.3e-221 772.3 519 72.4
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 4.0e-221 771.5 519 72.3
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 1.2e-220 770.0 521 72.4
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 2.6e-220 768.8 519 71.7
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 4.4e-220 768.1 485 76.1
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 4.4e-220 768.1 519 71.5
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 5.8e-220 767.7 529 71.6
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 1.7e-219 766.1 517 70.8
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 4.9e-219 764.6 467 77.5
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 4.9e-219 764.6 519 71.3
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 8.3e-219 763.8 519 71.9
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 8.3e-219 763.8 543 69.1
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 3.2e-218 761.9 519 71.1
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 1.3e-216 756.5 467 76.7
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.7e-216 756.1 516 71.5
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 6.6e-216 754.2 520 69.6
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 5.6e-215 751.1 520 69.6
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 1.6e-214 749.6 465 76.8
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 1.4e-213 746.5 465 76.8
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 2.4e-213 745.7 472 76.1
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 5.2e-213 744.6 519 70.3
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 4.9e-211 738.0 519 70.1
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 1.4e-210 736.5 522 69.3
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 1.6e-209 733.0 519 69.4
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 1.6e-209 733.0 519 69.4
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 4.6e-209 731.5 471 73.2
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 1.7e-208 729.6 474 73.6
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 2.3e-208 729.2 515 68.7
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 3.9e-208 728.4 514 69.3
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 8.7e-208 727.2 515 68.7
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 2.1e-206 722.6 519 69.2
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 5.2e-205 718.0 520 67.1
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 3.0e-200 702.2 549 66.3
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 8.7e-200 700.7 574 62.0
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 7.3e-199 697.6 519 67.8
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 6.2e-198 694.5 560 63.6
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 4.0e-197 691.8 519 65.1
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 4.9e-195 684.9 521 65.8
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 1.3e-192 676.8 519 64.5
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 6.9e-189 664.5 521 63.9
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 9.6e-183 644.0 499 65.7
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 2.1e-182 642.9 381 80.1
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 4.6e-177 625.2 377 77.5
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 7.9e-177 624.4 481 65.3
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 5.7e-175 618.2 478 65.3
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 6.3e-174 614.8 380 76.6
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 1.5e-164 583.6 446 61.0
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 2.5e-162 576.2 560 56.1
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 2.8e-158 562.8 491 56.6
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 1.2e-153 547.4 476 56.9
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 1.2e-148 530.8 477 55.3
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 7.5e-135 485.0 352 66.8
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 8.3e-134 481.5 291 79.7
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 1.8e-125 453.8 292 74.0
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 1.8e-120 437.2 277 72.6
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 5.4e-117 425.6 262 74.8
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 4.3e-114 416.0 288 72.6
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 1.4e-112 411.0 287 71.8
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 6.0e-100 369.0 242 73.6
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 4.3e-98 362.8 250 69.2
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.3e-74 283.1 204 67.2
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 8.7e-59 232.3 408 35.0
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 9.7e-50 202.2 477 32.1
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 1.3e-49 201.8 132 66.7
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 6.7e-35 152.9 206 45.6
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 3.5e-31 140.6 109 58.7
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 5.9e-31 139.8 143 49.7
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 1.0e-22 112.5 85 64.7
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.7e-20 104.4 143 48.3
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 9.8e-18 95.9 57 71.9
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 2.8e-17 94.4 149 36.2
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 1.1e-16 92.4 60 68.3
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.2e-08 64.3 171 33.3
TPR.G21382 Trifolium pratense HOM05D003954 ORTHO05D004627 1.6e-07 62.0 55 60.0


User provided reference genes

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