Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 6.6e-108 394.0 198 100.0
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 5.1e-92 341.3 197 86.3
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 4.9e-79 298.1 198 74.7
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 1.4e-78 296.6 196 75.5
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 1.4e-78 296.6 198 70.2
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 1.4e-78 296.6 196 74.0
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 3.2e-78 295.4 196 74.5
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 3.2e-78 295.4 198 70.2
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 1.2e-77 293.5 197 70.6
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 1.6e-77 293.1 198 71.7
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 4.6e-77 291.6 198 71.2
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 6.0e-77 291.2 198 70.7
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 6.0e-77 291.2 198 72.7
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 1.0e-76 290.4 198 70.7
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.0e-76 290.4 198 71.2
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 1.3e-76 290.0 195 70.3
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 2.3e-76 289.3 197 70.1
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 3.0e-76 288.9 198 73.2
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 3.9e-76 288.5 198 72.2
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 3.9e-76 288.5 196 69.4
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 3.9e-76 288.5 194 71.1
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 6.6e-76 287.7 198 68.7
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 6.6e-76 287.7 198 70.2
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 8.7e-76 287.3 198 69.7
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 8.7e-76 287.3 197 69.5
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 8.7e-76 287.3 194 70.6
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.1e-75 287.0 198 73.2
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 1.1e-75 287.0 198 68.2
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 3.3e-75 285.4 198 68.7
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 3.3e-75 285.4 196 66.8
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 5.6e-75 284.6 198 68.2
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 5.6e-75 284.6 196 69.9
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 7.3e-75 284.3 197 68.5
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 1.6e-74 283.1 197 67.5
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 1.6e-74 283.1 198 67.2
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 2.1e-74 282.7 198 69.7
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 3.6e-74 282.0 197 70.6
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 4.8e-74 281.6 198 69.7
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 6.2e-74 281.2 198 69.7
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 6.2e-74 281.2 196 68.9
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 8.1e-74 280.8 198 68.2
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 8.1e-74 280.8 196 68.9
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 1.1e-73 280.4 198 69.2
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 1.1e-73 280.4 198 67.7
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.1e-73 280.4 198 70.2
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.1e-73 280.4 198 68.7
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 1.4e-73 280.0 198 67.7
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 1.8e-73 279.6 198 68.7
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 1.8e-73 279.6 197 69.0
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 2.4e-73 279.3 198 65.7
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 3.1e-73 278.9 197 68.0
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 3.1e-73 278.9 198 68.7
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 3.1e-73 278.9 198 68.7
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 3.1e-73 278.9 198 67.2
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 4.0e-73 278.5 189 70.4
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 9.0e-73 277.3 198 68.2
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 9.0e-73 277.3 197 66.0
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 2.6e-72 275.8 198 65.2
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 3.4e-72 275.4 183 74.3
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 3.4e-72 275.4 198 66.2
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 7.6e-72 274.2 198 69.7
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 9.9e-72 273.9 198 69.2
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 9.9e-72 273.9 197 64.5
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 1.7e-71 273.1 198 66.7
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 3.8e-71 271.9 197 68.0
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 4.9e-71 271.6 198 65.2
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 6.4e-71 271.2 183 70.5
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 6.4e-71 271.2 197 66.5
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 8.4e-71 270.8 198 65.7
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 8.4e-71 270.8 198 65.7
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 1.4e-70 270.0 194 65.5
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 1.9e-70 269.6 196 64.8
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 2.4e-70 269.2 198 66.2
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 2.4e-70 269.2 198 67.2
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 2.4e-70 269.2 198 65.7
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 5.5e-70 268.1 198 68.7
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 7.1e-70 267.7 194 67.0
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 9.3e-70 267.3 198 64.1
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 9.3e-70 267.3 198 62.6
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 1.6e-69 266.5 194 65.5
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 1.6e-69 266.5 198 64.6
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 2.1e-69 266.2 198 67.7
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 3.5e-69 265.4 198 67.7
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 3.5e-69 265.4 198 65.7
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.0e-68 263.8 198 63.6
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 1.0e-68 263.8 198 67.2
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 2.3e-68 262.7 199 62.3
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 2.3e-68 262.7 193 65.8
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 3.0e-68 262.3 198 67.7
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 3.9e-68 261.9 197 62.9
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 2.5e-67 259.2 197 61.9
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 4.3e-67 258.5 199 65.3
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 7.4e-67 257.7 194 67.0
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 9.6e-67 257.3 183 68.9
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 1.6e-66 256.5 197 61.4
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 2.8e-66 255.8 198 60.6
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 2.8e-66 255.8 186 67.7
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 6.2e-66 254.6 198 60.1
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 6.2e-66 254.6 198 60.1
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 1.1e-65 253.8 187 65.8
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.1e-65 253.8 184 65.8
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 1.4e-65 253.4 198 61.6
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 1.4e-65 253.4 196 60.2
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.8e-65 253.1 184 65.8
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 1.8e-65 253.1 184 65.8
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 1.8e-65 253.1 196 65.8
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 3.1e-65 252.3 198 63.1
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 5.3e-65 251.5 191 60.2
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 6.9e-65 251.1 196 63.8
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 1.2e-64 250.4 186 65.1
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 2.0e-64 249.6 198 63.1
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 3.4e-64 248.8 186 66.1
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 4.5e-64 248.4 191 64.4
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 1.3e-63 246.9 198 60.6
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 2.2e-63 246.1 178 64.0
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 4.2e-62 241.9 183 66.1
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 2.3e-60 236.1 187 63.1
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 2.5e-59 232.6 183 62.3
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 4.8e-58 228.4 190 59.5
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 1.2e-56 223.8 143 73.4
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 5.9e-56 221.5 187 56.7
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 6.5e-55 218.0 172 62.2
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 3.2e-54 215.7 164 64.6
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 4.2e-54 215.3 144 72.9
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 7.9e-53 211.1 144 68.8
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 1.9e-51 206.5 144 64.6
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 6.3e-50 201.4 155 63.9
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 1.1e-49 200.7 192 50.5
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 5.3e-49 198.4 156 59.6
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 5.0e-47 191.8 180 52.2
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.2e-45 187.2 197 48.2
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 2.2e-42 176.4 124 70.2
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 1.7e-39 166.8 198 48.5
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 2.2e-39 166.4 114 68.4
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 7.2e-38 161.4 198 45.5
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 4.4e-35 152.1 98 72.4
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 7.4e-35 151.4 181 44.8
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 3.8e-31 139.0 182 42.9
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 7.2e-30 134.8 183 44.3
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 1.2e-24 117.5 73 67.1
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 6.1e-21 105.1 68 70.6
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 4.0e-20 102.4 186 34.9
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 2.6e-19 99.8 114 48.2
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 5.7e-19 98.6 194 35.6
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 4.8e-18 95.5 118 46.6
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 1.8e-17 93.6 134 44.8
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 4.1e-17 92.4 104 49.0
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 4.1e-17 92.4 70 60.0
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 2.2e-15 86.7 64 57.8
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 6.8e-12 75.1 58 65.5
Actinidia11311 Actinidia chinensis HOM05D004717 ORTHO05D005636 5.4e-09 65.5 40 72.5
Dinv05788 Davidia involucrata HOM05D004717 ORTHO05D005636 6.6e-07 58.5 35 68.6


User provided reference genes

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