Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01038746001 Vitis vinifera HOM05D000567 ORTHO05D001981 2.1e-32 141.7 71 100.0
Potri.014G099700 Populus trichocarpa HOM05D000567 ORTHO05D001981 4.4e-14 80.9 70 54.3
Sabra14G0073100 Salix brachista HOM05D000567 ORTHO05D001981 1.3e-13 79.3 70 52.9
Manes.01G245600 Manihot esculenta HOM05D000567 ORTHO05D001981 3.7e-13 77.8 70 54.3
Ciclev10019339m.g Citrus clementina HOM05D000567 ORTHO05D001981 4.9e-13 77.4 70 50.0
CiPaw.01G077000 Carya illinoinensis HOM05D000567 ORTHO05D001981 1.4e-12 75.9 70 51.4
COL.COLO4_06275 Corchorus olitorius HOM05D000567 ORTHO05D001981 1.9e-12 75.5 70 52.9
Thecc.01G341000 Theobroma cacao HOM05D000567 ORTHO05D001981 1.9e-12 75.5 70 52.9
Sabra02G0140700 Salix brachista HOM05D000567 ORTHO05D001981 2.4e-12 75.1 70 50.0
Actinidia07970 Actinidia chinensis HOM05D000567 ORTHO05D001981 5.4e-12 73.9 71 52.1
Cfa003790 Carpinus fangiana HOM05D000567 ORTHO05D001981 9.2e-12 73.2 59 57.6
Prupe.2G190100 Prunus persica HOM05D000567 ORTHO05D001981 9.2e-12 73.2 70 48.6
QL04p060462 Quercus lobata HOM05D000567 ORTHO05D001981 1.6e-11 72.4 61 57.4
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 2.1e-11 72.0 71 49.3
Duzib268G1595 Durio zibethinus HOM05D000567 ORTHO05D001981 2.7e-11 71.6 70 51.4
Eucgr.E00047 Eucalyptus grandis HOM05D000567 ORTHO05D001981 2.7e-11 71.6 69 49.3
Haze_15670 Corylus avellana HOM05D000567 ORTHO05D001981 3.5e-11 71.2 55 61.8
CSS0012339 Camellia sinensis var. sinensis HOM05D000567 ORTHO05D001981 4.6e-11 70.9 70 50.0
CSS0037363 Camellia sinensis var. sinensis HOM05D000567 ORTHO05D001981 4.6e-11 70.9 70 50.0
Duzib133G0663 Durio zibethinus HOM05D000567 ORTHO05D001981 6.0e-11 70.5 70 50.0
Potri.002G172101 Populus trichocarpa HOM05D000567 ORTHO05D001981 6.0e-11 70.5 70 50.0
Dinv32599 Davidia involucrata HOM05D000567 ORTHO05D001981 1.0e-10 69.7 73 50.7
Oeu004981.2 Olea europaea HOM05D000567 ORTHO05D001981 1.3e-10 69.3 70 50.0
Hma1.2p1_2910F.1_g330160 Hydrangea macrophylla HOM05D000567 ORTHO05D001981 3.0e-10 68.2 71 50.7
PGR031G1756 Punica granatum HOM05D000567 ORTHO05D001981 8.6e-10 66.6 69 47.8
Lj9P599T31 Lonicera japonica HOM05D000567 ORTHO05D001981 1.5e-09 65.9 71 43.7
TWI59G1052 Tripterygium wilfordii HOM05D000567 ORTHO05D001981 1.5e-09 65.9 70 48.6
Lalb_Chr18g0044581 Lupinus albus HOM05D000567 ORTHO05D001981 1.9e-09 65.5 68 51.5
Rhsim07G0003400 Rhododendron simsii HOM05D000567 ORTHO05D001981 1.9e-09 65.5 72 51.4
Manes.05G022000 Manihot esculenta HOM05D000567 ORTHO05D001981 4.3e-09 64.3 59 54.2
TWI14G0491 Tripterygium wilfordii HOM05D000567 ORTHO05D001981 4.3e-09 64.3 70 45.7
MD01G1082700 Malus domestica HOM05D000567 ORTHO05D001981 5.6e-09 63.9 70 44.3
TAR375G0001 Trochodendron aralioides HOM05D000567 ORTHO05D001981 7.3e-09 63.5 68 48.5
CANSAT56G0053 Cannabis sativa HOM05D000567 ORTHO05D001981 1.2e-08 62.8 72 54.2
Dinv35122 Davidia involucrata HOM05D000567 ORTHO05D001981 1.2e-08 62.8 66 51.5
TAR629G1367 Trochodendron aralioides HOM05D000567 ORTHO05D001981 1.2e-08 62.8 68 50.0
FvH4_7g16800 Fragaria vesca HOM05D000567 ORTHO05D001981 1.6e-08 62.4 70 45.7
FAN01G2125 Fragaria x ananassa HOM05D000567 ORTHO05D001981 1.6e-08 62.4 70 45.7
FAN06G2064 Fragaria x ananassa HOM05D000567 ORTHO05D001981 1.6e-08 62.4 70 45.7
FAN06G4092 Fragaria x ananassa HOM05D000567 ORTHO05D001981 1.6e-08 62.4 70 45.7
RcHm_v2.0_Chr1g0360001 Rosa chinensis HOM05D000567 ORTHO05D001981 2.1e-08 62.0 65 49.2
Sc01g0002610 Simmondsia chinensis HOM05D000567 ORTHO05D001981 2.1e-08 62.0 69 44.9
MD07G1151000 Malus domestica HOM05D000567 ORTHO05D001981 4.7e-08 60.8 70 42.9
Gohir.D11G102200 Gossypium hirsutum HOM05D000567 ORTHO05D001981 6.2e-08 60.5 71 47.9
Gorai.007G109300 Gossypium raimondii HOM05D000567 ORTHO05D001981 6.2e-08 60.5 71 47.9
Nitab4.5_0002614g0020 Nicotiana tabacum HOM05D000567 ORTHO05D001981 6.2e-08 60.5 70 45.7
FAN03G2897 Fragaria x ananassa HOM05D000567 ORTHO05D001981 1.1e-07 59.7 70 44.3
MSTRG.17351 Avicennia marina HOM05D000567 ORTHO05D001981 1.4e-07 59.3 70 47.1
Oeu035807.1 Olea europaea HOM05D000567 ORTHO05D001981 1.4e-07 59.3 70 41.4
TWI23G1035 Tripterygium wilfordii HOM05D000567 ORTHO05D001981 1.4e-07 59.3 70 42.9
Phvul.006G114000 Phaseolus vulgaris HOM05D000567 ORTHO05D001981 1.8e-07 58.9 71 46.5
CSS0048738 Camellia sinensis var. sinensis HOM05D000567 ORTHO05D001981 2.4e-07 58.5 70 44.3
Cc02_g39470 Coffea canephora HOM05D000567 ORTHO05D001981 2.4e-07 58.5 70 44.3
Lalb_Chr15g0076311 Lupinus albus HOM05D000567 ORTHO05D001981 2.4e-07 58.5 68 48.5
MBI07_g37058_MAGBIO Magnolia biondii HOM05D000567 ORTHO05D001981 2.4e-07 58.5 70 50.0
SalBow3G2717 Salvia bowleyana HOM05D000567 ORTHO05D001981 3.1e-07 58.2 68 45.6
FAN10G2162 Fragaria x ananassa HOM05D000567 ORTHO05D001981 5.2e-07 57.4 70 42.9
arahy.Tifrunner.gnm1.ann1.TPIF41 Arachis hypogaea HOM05D000567 ORTHO05D001981 6.8e-07 57.0 64 46.9
Sc23g0002040 Simmondsia chinensis HOM05D000567 ORTHO05D001981 6.8e-07 57.0 69 39.1
Nitab4.5_0001763g0070 Nicotiana tabacum HOM05D000567 ORTHO05D001981 1.2e-06 56.2 70 44.3
FAN10G3227 Fragaria x ananassa HOM05D000567 ORTHO05D001981 2.6e-06 55.1 70 41.4
Nn3g17161 Nelumbo nucifera HOM05D000567 ORTHO05D001981 2.6e-06 55.1 68 41.2
AUR62004505 Chenopodium quinoa HOM05D000567 ORTHO05D001981 4.4e-06 54.3 58 43.1
Sopen01g039770 Solanum pennellii HOM05D000567 ORTHO05D001981 4.4e-06 54.3 71 45.1
VMungo0540G2148 Vigna mungo HOM05D000567 ORTHO05D001981 5.8e-06 53.9 69 44.9
Ah.05g179450 Amaranthus hybridus HOM05D000567 ORTHO05D001981 9.9e-06 53.1 51 49.0
Solyc01g096050.4 Solanum lycopersicum HOM05D000567 ORTHO05D001981 9.9e-06 53.1 71 43.7


User provided reference genes

Program Settings