Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01038686001 Vitis vinifera HOM05D006040 ORTHO05D007134 3.5e-241 837.8 405 100.0
Dinv29187 Davidia involucrata HOM05D006040 ORTHO05D007134 5.4e-157 558.1 461 62.9
TAR375G0263 Trochodendron aralioides HOM05D006040 ORTHO05D007134 1.4e-144 516.9 466 59.7
Actinidia18692 Actinidia chinensis HOM05D006040 ORTHO05D007134 6.8e-144 514.6 440 60.5
Prupe.2G322500 Prunus persica HOM05D006040 ORTHO05D007134 3.4e-143 512.3 462 57.1
Hma1.2p1_1235F.1_g269220 Hydrangea macrophylla HOM05D006040 ORTHO05D007134 7.6e-143 511.1 453 58.5
Rhsim09G0211300 Rhododendron simsii HOM05D006040 ORTHO05D007134 3.8e-142 508.8 441 60.1
MD07G1303900 Malus domestica HOM05D006040 ORTHO05D007134 1.2e-140 503.8 463 55.7
Cfa018660 Carpinus fangiana HOM05D006040 ORTHO05D007134 5.2e-136 488.4 471 55.2
Eucgr.A00979 Eucalyptus grandis HOM05D006040 ORTHO05D007134 9.0e-136 487.6 449 54.6
QL01p000066 Quercus lobata HOM05D006040 ORTHO05D007134 8.4e-134 481.1 483 53.6
FvH4_7g32290 Fragaria vesca HOM05D006040 ORTHO05D007134 7.1e-133 478.0 458 54.6
RcHm_v2.0_Chr1g0383341 Rosa chinensis HOM05D006040 ORTHO05D007134 9.3e-133 477.6 456 53.9
FAN20G2114 Fragaria x ananassa HOM05D006040 ORTHO05D007134 1.2e-132 477.2 458 54.4
FAN10G3876 Fragaria x ananassa HOM05D006040 ORTHO05D007134 2.7e-132 476.1 462 54.1
PGR042G3864 Punica granatum HOM05D006040 ORTHO05D007134 3.5e-132 475.7 453 54.5
FAN03G3503 Fragaria x ananassa HOM05D006040 ORTHO05D007134 4.6e-132 475.3 461 54.7
arahy.Tifrunner.gnm1.ann1.53C9AK Arachis hypogaea HOM05D006040 ORTHO05D007134 1.7e-131 473.4 445 54.2
FAN10G2970 Fragaria x ananassa HOM05D006040 ORTHO05D007134 1.7e-131 473.4 461 53.6
TWI13G0007 Tripterygium wilfordii HOM05D006040 ORTHO05D007134 8.7e-131 471.1 455 54.5
TWI74G0239 Tripterygium wilfordii HOM05D006040 ORTHO05D007134 8.7e-131 471.1 455 54.5
arahy.Tifrunner.gnm1.ann1.QSB9JP Arachis hypogaea HOM05D006040 ORTHO05D007134 1.6e-129 466.8 445 53.5
CANSAT21G0186 Cannabis sativa HOM05D006040 ORTHO05D007134 1.6e-129 466.8 442 56.1
Sed0006638 Sechium edule HOM05D006040 ORTHO05D007134 2.4e-128 463.0 453 53.2
FAN06G3790 Fragaria x ananassa HOM05D006040 ORTHO05D007134 3.1e-128 462.6 451 53.7
PSO063G2217 Papaver somniferum HOM05D006040 ORTHO05D007134 7.6e-127 458.0 467 51.0
Lj1g0004094 Lotus japonicus HOM05D006040 ORTHO05D007134 3.8e-126 455.7 401 56.9
Lj3C891T14 Lonicera japonica HOM05D006040 ORTHO05D007134 8.4e-126 454.5 374 61.0
Lalb_Chr08g0239381 Lupinus albus HOM05D006040 ORTHO05D007134 8.4e-126 454.5 406 57.4
EL10Ac3g05126 Beta vulgaris HOM05D006040 ORTHO05D007134 7.1e-125 451.4 416 55.0
Lalb_Chr10g0102951 Lupinus albus HOM05D006040 ORTHO05D007134 7.1e-125 451.4 466 52.6
Hund21080 Selenicereus undatus HOM05D006040 ORTHO05D007134 1.2e-124 450.7 413 54.2
Aqoxy3G00220 Aquilegia oxysepala HOM05D006040 ORTHO05D007134 1.6e-124 450.3 455 52.5
PSO017G1458 Papaver somniferum HOM05D006040 ORTHO05D007134 2.7e-124 449.5 467 51.2
Thecc.03G212500 Theobroma cacao HOM05D006040 ORTHO05D007134 1.0e-123 447.6 438 54.8
AUR62028121 Chenopodium quinoa HOM05D006040 ORTHO05D007134 1.8e-123 446.8 409 55.0
AUR62005943 Chenopodium quinoa HOM05D006040 ORTHO05D007134 3.9e-123 445.7 417 54.2
Nitab4.5_0000115g0200 Nicotiana tabacum HOM05D006040 ORTHO05D007134 3.9e-123 445.7 419 53.9
ClCG02G007980 Citrullus lanatus HOM05D006040 ORTHO05D007134 5.1e-123 445.3 457 52.3
CsaV3_2G035690 Cucumis sativus L. HOM05D006040 ORTHO05D007134 5.1e-123 445.3 455 51.4
Phvul.009G040600 Phaseolus vulgaris HOM05D006040 ORTHO05D007134 1.1e-122 444.1 406 56.7
Glyma.02G220600 Glycine max HOM05D006040 ORTHO05D007134 5.6e-122 441.8 455 51.2
Psat2g061600 Pisum sativum HOM05D006040 ORTHO05D007134 7.4e-122 441.4 453 51.2
Atru.chr12.2497 Acer truncatum HOM05D006040 ORTHO05D007134 1.3e-121 440.7 439 54.2
Atru.chr12.2521 Acer truncatum HOM05D006040 ORTHO05D007134 1.3e-121 440.7 439 54.2
MSTRG.18 Avicennia marina HOM05D006040 ORTHO05D007134 1.3e-121 440.7 427 57.1
Cc02_g00560 Coffea canephora HOM05D006040 ORTHO05D007134 1.6e-121 440.3 433 52.0
Potri.012G004300 Populus trichocarpa HOM05D006040 ORTHO05D007134 2.1e-121 439.9 459 50.3
PGSC0003DMG400026928 Solanum tuberosum HOM05D006040 ORTHO05D007134 2.1e-121 439.9 426 55.9
TPR.G35913 Trifolium pratense HOM05D006040 ORTHO05D007134 2.1e-121 439.9 402 54.7
SalBow2G1501 Salvia bowleyana HOM05D006040 ORTHO05D007134 2.8e-121 439.5 416 54.6
Solyc06g072970.3 Solanum lycopersicum HOM05D006040 ORTHO05D007134 8.1e-121 438.0 420 55.2
Manes.05G196800 Manihot esculenta HOM05D006040 ORTHO05D007134 1.1e-120 437.6 456 51.1
Sopen06g029320 Solanum pennellii HOM05D006040 ORTHO05D007134 1.4e-120 437.2 422 56.2
Gorai.004G126800 Gossypium raimondii HOM05D006040 ORTHO05D007134 2.0e-119 433.3 443 54.2
Medtr3g093420 Medicago truncatula HOM05D006040 ORTHO05D007134 3.4e-119 432.6 404 55.7
CSS0020482 Camellia sinensis var. sinensis HOM05D006040 ORTHO05D007134 9.9e-119 431.0 374 58.8
Zm00001eb229510 Zea mays HOM05D006040 ORTHO05D007134 9.9e-119 431.0 415 53.5
Nitab4.5_0003012g0150 Nicotiana tabacum HOM05D006040 ORTHO05D007134 1.7e-118 430.3 462 50.0
DCAR_010554 Daucus carota HOM05D006040 ORTHO05D007134 6.4e-118 428.3 431 52.2
TPR.G27916 Trifolium pratense HOM05D006040 ORTHO05D007134 2.4e-117 426.4 453 51.0
Os02g0106700 Oryza sativa ssp. japonica HOM05D006040 ORTHO05D007134 7.1e-117 424.9 417 52.0
Medtr5g068730 Medicago truncatula HOM05D006040 ORTHO05D007134 1.6e-116 423.7 454 49.8
Glyma.06G139400 Glycine max HOM05D006040 ORTHO05D007134 2.1e-116 423.3 400 54.5
Cpa.g.sc3.191 Carica papaya HOM05D006040 ORTHO05D007134 3.5e-116 422.5 367 60.5
LjContig00155g0021870 Lotus japonicus HOM05D006040 ORTHO05D007134 3.5e-116 422.5 458 50.7
MELO3C024776.2 Cucumis melo HOM05D006040 ORTHO05D007134 4.6e-116 422.2 417 54.7
Migut.F00965 Erythranthe guttata HOM05D006040 ORTHO05D007134 7.9e-116 421.4 424 52.1
Ca_05537_v3 Cicer arietinum L. HOM05D006040 ORTHO05D007134 1.0e-115 421.0 452 51.1
Zm00001eb209800 Zea mays HOM05D006040 ORTHO05D007134 1.0e-115 421.0 416 52.4
Sabra12G0000200 Salix brachista HOM05D006040 ORTHO05D007134 6.7e-115 418.3 429 51.0
HanXRQChr14g0463001 Helianthus annuus HOM05D006040 ORTHO05D007134 8.7e-115 417.9 412 53.2
Sc25g0001060 Simmondsia chinensis HOM05D006040 ORTHO05D007134 8.7e-115 417.9 334 61.1
Ca_16841_v3 Cicer arietinum L. HOM05D006040 ORTHO05D007134 2.1e-113 413.3 320 61.9
ATR0579G018 Amborella trichopoda HOM05D006040 ORTHO05D007134 6.2e-113 411.8 417 53.0
Psat5g070440 Pisum sativum HOM05D006040 ORTHO05D007134 4.0e-112 409.1 317 61.5
VMungo0647G0797 Vigna mungo HOM05D006040 ORTHO05D007134 9.0e-112 407.9 369 55.6
SGA_v2.0_scaffold59G20786 Striga asiatica HOM05D006040 ORTHO05D007134 1.2e-111 407.5 414 51.0
CAN.G65.140 Capsicum annuum HOM05D006040 ORTHO05D007134 8.4e-110 401.4 362 59.9
Peaxi162Scf00815g00228 Petunia axillaris HOM05D006040 ORTHO05D007134 3.2e-109 399.4 360 58.3
ECA238G4129 Erigeron canadensis HOM05D006040 ORTHO05D007134 3.7e-105 386.0 417 49.9
Lsat_1_v5_gn_8_36881 Lactuca sativa HOM05D006040 ORTHO05D007134 1.5e-103 380.6 428 48.4
SEGI_40721 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 2.6e-103 379.8 485 44.7
THA.LOC104798996 Tarenaya hassleriana HOM05D006040 ORTHO05D007134 2.6e-103 379.8 431 48.7
HPP92_012812 Vanilla planifolia HOM05D006040 ORTHO05D007134 7.6e-103 378.3 427 47.1
Thhalv10004343m.g Eutrema salsugineum HOM05D006040 ORTHO05D007134 7.7e-95 351.7 428 47.9
unitig_578.g16670 Utricularia gibba HOM05D006040 ORTHO05D007134 1.0e-94 351.3 337 53.1
Carub.0006s2254 Capsella rubella HOM05D006040 ORTHO05D007134 1.7e-94 350.5 428 46.0
Sp2g22720 Schrenkiella parvula HOM05D006040 ORTHO05D007134 1.4e-93 347.4 429 46.4
AT5G24680 Arabidopsis thaliana HOM05D006040 ORTHO05D007134 9.4e-93 344.7 431 46.4
Gohir.A08G107000 Gossypium hirsutum HOM05D006040 ORTHO05D007134 9.4e-93 344.7 443 47.2
FvH4_7g33360 Fragaria vesca HOM05D006040 ORTHO05D007134 2.3e-91 340.1 300 57.7
BraA06t26478Z Brassica rapa HOM05D006040 ORTHO05D007134 1.3e-89 334.3 433 45.3
A06p35530 Brassica napus HOM05D006040 ORTHO05D007134 1.7e-89 334.0 427 45.4
C07p43010 Brassica napus HOM05D006040 ORTHO05D007134 7.0e-88 328.6 435 46.0
Phvul.008G187700 Phaseolus vulgaris HOM05D006040 ORTHO05D007134 2.6e-87 326.6 394 45.2
AL6G36290 Arabidopsis lyrata HOM05D006040 ORTHO05D007134 5.9e-87 325.5 433 44.8
BolC7t44830H Brassica oleracea HOM05D006040 ORTHO05D007134 5.0e-86 322.4 436 45.2
vmacro10175 Vaccinium macrocarpon HOM05D006040 ORTHO05D007134 2.5e-85 320.1 404 45.3
Glyma.14G187200 Glycine max HOM05D006040 ORTHO05D007134 5.5e-85 318.9 326 52.5
FAN01G0445 Fragaria x ananassa HOM05D006040 ORTHO05D007134 6.1e-84 315.5 409 45.0
Aa31LG11G3920 Aethionema arabicum HOM05D006040 ORTHO05D007134 5.2e-83 312.4 515 39.2
Haze_00002 Corylus avellana HOM05D006040 ORTHO05D007134 2.6e-82 310.1 266 59.8
Pp3c12_6120 Physcomitrium patens HOM05D006040 ORTHO05D007134 3.5e-79 299.7 546 35.3
BcaNung01250 Brassica carinata HOM05D006040 ORTHO05D007134 2.5e-77 293.5 432 42.8
Pp3c13_14780 Physcomitrium patens HOM05D006040 ORTHO05D007134 1.7e-73 280.8 439 38.5
MBI12_g33183_MAGBIO Magnolia biondii HOM05D006040 ORTHO05D007134 1.0e-70 271.6 327 46.2
COL.COLO4_14403 Corchorus olitorius HOM05D002417 ORTHO05D002589 3.8e-70 269.6 338 45.9
Glyma.04G225400 Glycine max HOM05D006040 ORTHO05D007134 4.2e-69 266.2 304 48.0
Duzib068G0842 Durio zibethinus HOM05D006040 ORTHO05D007134 6.1e-68 262.3 257 54.5
Pp3c25_2290 Physcomitrium patens HOM05D006040 ORTHO05D007134 4.0e-67 259.6 408 36.0
Pp3c20_10180 Physcomitrium patens HOM05D006040 ORTHO05D007134 1.5e-66 257.7 404 36.9
VMungo1309G2872 Vigna mungo HOM05D006040 ORTHO05D007134 3.1e-64 250.0 308 45.1
Mapoly0044s0025 Marchantia polymorpha HOM05D006040 ORTHO05D007134 5.2e-59 232.6 492 31.1
MD01G1231800 Malus domestica HOM05D006040 ORTHO05D007134 2.7e-55 220.3 149 67.8
Gohir.D08G118000 Gossypium hirsutum HOM05D006040 ORTHO05D007134 3.5e-55 219.9 347 40.9
Mapoly0088s0074 Marchantia polymorpha HOM05D006040 ORTHO05D007134 2.3e-54 217.2 549 29.1
CARHR188790 Cardamine hirsuta HOM05D006040 ORTHO05D007134 1.5e-53 214.5 250 47.6
Lalb_Chr14g0364691 Lupinus albus HOM05D006040 ORTHO05D007134 3.1e-43 180.3 130 67.7
SEGI_00936 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 4.4e-42 176.4 212 42.9
SEGI_39404 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 7.5e-42 175.6 208 43.8
CBR_g29958 Chara braunii HOM05D006040 ORTHO05D007134 9.8e-42 175.3 161 51.6
CBR_g3746 Chara braunii HOM05D000019 ORTHO05D000002 3.2e-40 170.2 154 53.2
Pp3c23_1100 Physcomitrium patens HOM05D006040 ORTHO05D007134 2.1e-39 167.5 140 54.3
SMO347G0626 Selaginella moellendorffii HOM05D006040 ORTHO05D007134 9.9e-34 148.7 170 45.9
MD01G1231900 Malus domestica HOM05D006040 ORTHO05D007134 1.0e-30 138.7 95 68.4
FvH4_7g33700 Fragaria vesca HOM05D006040 ORTHO05D007134 1.7e-30 137.9 267 33.7
SEGI_38707 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 6.2e-28 129.4 213 35.2
Oeu063747.1 Olea europaea HOM05D006040 ORTHO05D007134 3.8e-25 120.2 98 59.2
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 2.1e-23 114.4 159 43.4
CDE04G3558 Ceratophyllum demersum HOM05D006040 ORTHO05D007134 1.7e-14 84.7 58 69.0
Cre05.g240500 Chlamydomonas reinhardtii HOM05D006040 ORTHO05D007134 9.9e-10 68.9 54 59.3
SalBow2G3456 Salvia bowleyana HOM05D000168 ORTHO05D007134 3.8e-09 67.0 35 85.7
FvH4_7g33361 Fragaria vesca HOM05D006040 ORTHO05D007134 4.9e-09 66.6 93 39.8
Oeu063748.2 Olea europaea HOM05D003307 ORTHO05D003798 4.2e-08 63.5 52 51.9


User provided reference genes

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