Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 3.1e-62 241.9 145 100.0
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 5.3e-38 161.4 121 68.6
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 5.8e-37 157.9 123 69.1
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 7.6e-37 157.5 121 67.8
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 2.2e-36 156.0 121 66.9
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 3.8e-36 155.2 118 80.5
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 6.4e-36 154.5 125 77.6
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 6.4e-36 154.5 121 75.2
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 8.4e-36 154.1 126 66.7
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 1.9e-35 152.9 117 81.2
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 2.4e-35 152.5 121 81.0
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 2.4e-35 152.5 118 67.8
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 2.4e-35 152.5 121 65.3
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 2.4e-35 152.5 135 60.7
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 5.4e-35 151.4 120 82.5
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 5.4e-35 151.4 122 65.6
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 7.1e-35 151.0 124 66.1
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 9.3e-35 150.6 115 67.0
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 1.6e-34 149.8 129 59.7
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 3.5e-34 148.7 119 79.8
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 6.0e-34 147.9 118 83.1
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 6.0e-34 147.9 133 60.9
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 1.0e-33 147.1 129 72.1
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 1.0e-33 147.1 133 60.9
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 1.0e-33 147.1 129 58.9
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 1.3e-33 146.7 115 83.5
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.3e-33 146.7 118 81.4
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 1.3e-33 146.7 129 59.7
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 1.8e-33 146.4 119 80.7
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 1.8e-33 146.4 119 80.7
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 1.8e-33 146.4 133 72.2
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 2.3e-33 146.0 118 64.4
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 2.3e-33 146.0 119 80.7
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 2.3e-33 146.0 119 65.5
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 3.0e-33 145.6 119 74.8
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 3.0e-33 145.6 133 57.9
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 3.9e-33 145.2 133 72.9
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 3.9e-33 145.2 106 85.8
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 5.1e-33 144.8 118 80.5
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 8.7e-33 144.1 121 59.5
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 8.7e-33 144.1 121 59.5
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.1e-32 143.7 133 59.4
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.1e-32 143.7 121 62.0
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.1e-32 143.7 133 71.4
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 1.5e-32 143.3 129 74.4
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 1.5e-32 143.3 122 75.4
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 1.9e-32 142.9 119 60.5
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 1.9e-32 142.9 114 64.0
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 1.9e-32 142.9 121 61.2
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 2.5e-32 142.5 133 59.4
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 2.5e-32 142.5 119 63.9
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 3.3e-32 142.1 119 63.9
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 3.3e-32 142.1 119 60.5
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 4.3e-32 141.7 134 59.0
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 4.3e-32 141.7 119 59.7
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 4.3e-32 141.7 118 78.0
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 4.3e-32 141.7 119 61.3
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 5.6e-32 141.4 119 63.9
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 2.1e-31 139.4 119 58.0
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 2.8e-31 139.0 121 75.2
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 3.7e-31 138.7 119 63.0
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 8.1e-31 137.5 121 57.9
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 1.1e-30 137.1 122 59.8
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 1.1e-30 137.1 122 59.8
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 1.4e-30 136.7 119 58.8
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.8e-30 136.3 137 58.4
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 3.1e-30 135.6 119 73.1
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 4.0e-30 135.2 118 76.3
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 5.3e-30 134.8 112 63.4
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 9.0e-30 134.0 114 78.9
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 2.0e-29 132.9 121 55.4
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 2.0e-29 132.9 112 64.3
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 2.6e-29 132.5 118 75.4
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 2.6e-29 132.5 128 55.5
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 2.6e-29 132.5 116 75.0
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 2.6e-29 132.5 116 75.0
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 3.4e-29 132.1 123 72.4
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 3.4e-29 132.1 140 53.6
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 4.5e-29 131.7 116 74.1
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 5.8e-29 131.3 129 69.0
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 5.8e-29 131.3 130 65.4
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 1.3e-28 130.2 111 74.8
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 2.2e-28 129.4 103 66.0
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 2.9e-28 129.0 114 71.1
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 3.8e-28 128.6 114 73.7
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 8.4e-28 127.5 106 80.2
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 1.1e-27 127.1 115 59.1
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 1.4e-27 126.7 121 73.6
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 1.9e-27 126.3 112 75.9
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 2.4e-27 125.9 118 55.1
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 3.2e-27 125.6 113 58.4
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 3.2e-27 125.6 113 58.4
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 3.2e-27 125.6 113 58.4
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 4.2e-27 125.2 131 69.5
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 4.2e-27 125.2 113 56.6
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 5.5e-27 124.8 113 73.5
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 5.5e-27 124.8 113 58.4
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 7.1e-27 124.4 113 57.5
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 7.1e-27 124.4 113 57.5
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 1.6e-26 123.2 106 78.3
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 2.7e-26 122.5 126 55.6
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 2.7e-26 122.5 111 57.7
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 3.5e-26 122.1 111 56.8
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 3.5e-26 122.1 111 56.8
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 3.5e-26 122.1 111 56.8
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 3.5e-26 122.1 111 56.8
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 3.5e-26 122.1 125 69.6
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 4.6e-26 121.7 115 57.4
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 6.0e-26 121.3 106 59.4
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 7.9e-26 120.9 111 55.9
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.8e-25 119.8 126 52.4
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 3.9e-25 118.6 135 49.6
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.5e-24 116.7 122 52.5
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.6e-23 113.2 137 65.7
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 1.4e-22 110.2 111 54.1
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 4.0e-22 108.6 111 52.3
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 9.0e-22 107.5 65 80.0
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 1.2e-21 107.1 130 43.8
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 7.6e-21 104.4 69 71.0
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 2.9e-20 102.4 60 81.7
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 3.2e-19 99.0 80 66.2
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 2.1e-18 96.3 74 64.9
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 2.3e-17 92.8 94 56.4
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 3.9e-17 92.0 68 72.1
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 1.5e-16 90.1 58 69.0
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 4.3e-16 88.6 58 67.2
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 2.8e-15 85.9 62 67.7
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 3.7e-15 85.5 117 45.3
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 4.8e-15 85.1 133 37.6
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 7.7e-13 77.8 76 55.3
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 4.2e-11 72.0 113 37.2
C03p81600 Brassica napus HOM05D004876 ORTHO05D005488 2.5e-08 62.8 45 62.2
BolC3t20430H Brassica oleracea HOM05D004876 ORTHO05D005488 2.5e-08 62.8 45 62.2
C01p26050 Brassica napus HOM05D004876 ORTHO05D005488 2.8e-07 59.3 39 66.7
Oeu039385.1 Olea europaea HOM05D002276 ORTHO05D002381 8.2e-07 57.8 66 77.3
Zm00001eb290470 Zea mays HOM05D004876 ORTHO05D005488 6.9e-06 54.7 47 51.1


User provided reference genes

Program Settings