Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01038363001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.4e-262 909.1 456 100.0
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.9e-235 818.9 428 95.3
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 3.9e-180 635.2 436 73.2
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 3.1e-177 625.5 428 72.9
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 6.9e-177 624.4 428 72.7
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 1.3e-175 620.2 428 72.7
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 6.0e-173 611.3 428 71.5
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 5.1e-172 608.2 428 70.3
Actinidia17204 Actinidia chinensis HOM05D005365 ORTHO05D006910 5.1e-172 608.2 428 70.3
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 4.3e-171 605.1 428 70.3
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 7.4e-171 604.4 429 69.9
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 2.1e-170 602.8 427 71.0
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 2.1e-170 602.8 429 71.1
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 2.4e-169 599.4 428 69.9
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 4.1e-169 598.6 428 70.3
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 5.3e-169 598.2 428 69.9
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 2.0e-168 596.3 428 70.8
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 2.2e-167 592.8 428 68.5
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 9.3e-166 587.4 428 70.3
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 2.1e-165 586.3 428 67.1
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 2.7e-165 585.9 427 69.6
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 6.1e-165 584.7 429 69.5
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 1.0e-164 583.9 427 69.3
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 2.3e-164 582.8 535 59.3
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 3.3e-163 578.9 428 68.9
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 9.7e-163 577.4 427 67.4
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 2.4e-161 572.8 427 68.4
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 4.1e-161 572.0 427 67.4
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 1.2e-160 570.5 427 68.9
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 2.0e-160 569.7 438 64.6
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 2.6e-160 569.3 438 64.4
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 3.2e-158 562.4 427 64.9
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 3.2e-158 562.4 427 65.6
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 4.2e-158 562.0 428 64.5
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 9.4e-158 560.8 427 67.0
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 1.2e-157 560.5 428 65.0
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 1.2e-157 560.5 427 66.7
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 3.6e-157 558.9 453 64.2
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 6.1e-157 558.1 428 65.9
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 2.3e-156 556.2 427 65.3
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 3.0e-156 555.8 428 65.4
PGSC0003DMG400013306 Solanum tuberosum HOM05D005365 ORTHO05D006910 3.9e-156 555.4 428 65.7
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 1.1e-155 553.9 428 65.4
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 1.3e-154 550.4 429 65.5
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 1.1e-153 547.4 428 66.6
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 1.8e-153 546.6 429 65.5
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 1.8e-153 546.6 429 64.1
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 2.4e-153 546.2 429 63.4
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 4.1e-153 545.4 428 62.9
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 4.1e-153 545.4 429 62.9
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 5.3e-153 545.0 429 65.3
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 1.2e-152 543.9 428 63.3
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 3.4e-152 542.3 428 65.0
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 2.2e-151 539.7 430 63.3
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 6.5e-151 538.1 428 62.1
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 8.5e-151 537.7 428 62.6
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 1.4e-150 537.0 428 62.4
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 1.4e-150 537.0 428 65.9
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 1.9e-150 536.6 428 64.3
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 9.4e-150 534.3 436 61.9
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 1.2e-149 533.9 428 62.1
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 2.7e-149 532.7 440 63.9
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 1.8e-148 530.0 428 61.4
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 3.9e-148 528.9 428 63.6
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 5.7e-147 525.0 429 62.0
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 5.7e-147 525.0 428 64.5
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 7.4e-147 524.6 428 61.4
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 9.7e-147 524.2 428 62.4
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 1.2e-144 517.3 431 61.3
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 1.6e-144 516.9 429 60.8
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 1.3e-143 513.8 428 61.0
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 5.0e-143 511.9 428 60.0
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 1.9e-142 510.0 428 60.7
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 2.5e-142 509.6 428 60.5
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 1.6e-141 506.9 429 60.4
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 8.0e-141 504.6 430 61.2
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 4.0e-140 502.3 429 59.0
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 1.2e-139 500.7 429 59.7
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 2.0e-139 500.0 429 59.7
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 2.0e-139 500.0 429 59.7
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 2.6e-139 499.6 429 59.4
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 3.3e-139 499.2 429 59.4
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 9.7e-139 497.7 429 59.2
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 3.7e-138 495.7 395 64.3
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 4.1e-137 492.3 430 59.3
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 3.5e-136 489.2 429 60.4
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 1.3e-135 487.3 429 56.9
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 1.9e-134 483.4 427 56.9
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 9.4e-134 481.1 427 58.5
Ah.10g032430 Amaranthus hybridus HOM05D005365 ORTHO05D006910 7.5e-131 471.5 360 65.6
FvH4_1g30230 Fragaria vesca HOM05D005365 ORTHO05D006910 2.4e-129 466.5 348 67.2
FAN23G0266 Fragaria x ananassa HOM05D005365 ORTHO05D006910 2.0e-128 463.4 332 69.0
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 3.8e-127 459.1 436 56.7
Gohir.A11G168700 Gossypium hirsutum HOM05D005365 ORTHO05D006910 3.7e-122 442.6 321 68.8
Sc11g0004580 Simmondsia chinensis HOM05D005365 ORTHO05D006910 2.0e-120 436.8 332 64.5
TPR.G24911 Trifolium pratense HOM05D005365 ORTHO05D006910 8.6e-119 431.4 336 64.0
Sed0006074 Sechium edule HOM05D005365 ORTHO05D006910 2.4e-113 413.3 332 61.4
Rhsim10G0178300 Rhododendron simsii HOM05D005365 ORTHO05D006910 7.0e-113 411.8 393 57.8
SEGI_16018 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 1.2e-112 411.0 439 51.0
Thhalv10027679m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 3.6e-109 399.4 435 50.8
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 2.8e-85 320.1 390 46.2
SGA_v2.0_scaffold45G17195 Striga asiatica HOM05D005365 ORTHO05D006910 3.3e-78 296.6 274 55.5
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 2.8e-77 293.5 391 44.5
Pp3c22_14670 Physcomitrium patens HOM05D005365 ORTHO05D006910 8.4e-74 282.0 445 40.0
Mapoly0032s0119 Marchantia polymorpha HOM05D005365 ORTHO05D006910 1.7e-66 257.7 440 37.3
AagrBONN_evm.TU.Sc2ySwM_228.4009 Anthoceros agrestis HOM05D005365 ORTHO05D006910 1.2e-64 251.5 438 35.6
SMO367G0263 Selaginella moellendorffii HOM05D005365 ORTHO05D006910 3.7e-61 240.0 394 36.0
HPP92_006138 Vanilla planifolia HOM05D005365 ORTHO05D006910 2.4e-60 237.3 194 60.3
Dinv28185 Davidia involucrata HOM05D005365 ORTHO05D006910 2.0e-59 234.2 140 79.3
Os06g0256000 Oryza sativa ssp. japonica HOM05D005365 ORTHO05D006910 1.4e-52 211.5 220 50.9
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 6.1e-48 196.1 137 67.9
CAN.G691.4 Capsicum annuum HOM05D005365 ORTHO05D006910 1.1e-46 191.8 245 47.3
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 3.7e-45 186.8 137 65.0
CBR_g39392 Chara braunii HOM05D000019 ORTHO05D000048 5.9e-35 152.9 474 25.9
Oeu012492.1 Olea europaea HOM05D005365 ORTHO05D006910 8.5e-26 122.5 96 67.7
TPR.G674 Trifolium pratense HOM05D005365 ORTHO05D006910 2.8e-21 107.5 86 62.8
Nn1g00453 Nelumbo nucifera HOM05D005365 ORTHO05D006910 3.5e-19 100.5 64 71.9
HPP92_006139 Vanilla planifolia HOM05D005365 ORTHO05D006910 6.1e-16 89.7 86 58.1
PRCOL_00005851 Prasinoderma coloniale HOM05D005365 ORTHO05D006910 5.5e-09 66.6 154 34.4
SEGI_04861 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 5.5e-09 66.6 135 34.8


User provided reference genes

Program Settings